RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 FHAD1B1AJZ9 1412 aa29.34■■■□□ 2.29
CPNE1-208ENST00000414711 NPM1P06748 294 aaKnown RBP eCLIP29.25■■■□□ 2.27
CPNE1-208ENST00000414711 WRNQ14191 1432 aaPredicted RBP eCLIP29.22■■■□□ 2.27
CPNE1-208ENST00000414711 ADCY10Q96PN6 1610 aa29.2■■■□□ 2.26
CPNE1-208ENST00000414711 JPH4Q96JJ6 628 aa29.18■■■□□ 2.26
CPNE1-208ENST00000414711 ERICH3Q5RHP9 1530 aa29.18■■■□□ 2.26
CPNE1-208ENST00000414711 TSPOAP1O95153 1857 aa29.17■■■□□ 2.26
CPNE1-208ENST00000414711 RUSC2Q8N2Y8 1516 aa29.13■■■□□ 2.25
CPNE1-208ENST00000414711 ADGRL1O94910 1474 aa29.1■■■□□ 2.25
CPNE1-208ENST00000414711 HECW2Q9P2P5 1572 aa29.05■■■□□ 2.24
CPNE1-208ENST00000414711 BIVM-ERCC5R4GMW8 1640 aa29.02■■■□□ 2.24
CPNE1-208ENST00000414711 TOP2BQ02880 1626 aa29.01■■■□□ 2.23
CPNE1-208ENST00000414711 PPRC1Q5VV67 1664 aaKnown RBP28.88■■■□□ 2.21
CPNE1-208ENST00000414711 GLI2P10070 1586 aa28.81■■■□□ 2.2
CPNE1-208ENST00000414711 KIAA0586Q9BVV6 1533 aa28.8■■■□□ 2.2
CPNE1-208ENST00000414711 ABCC2Q92887 1545 aa28.77■■■□□ 2.2
CPNE1-208ENST00000414711 ASXL2Q76L83 1435 aa28.77■■■□□ 2.2
CPNE1-208ENST00000414711 PLB1Q6P1J6 1458 aa28.75■■■□□ 2.19
CPNE1-208ENST00000414711 COL17A1Q9UMD9 1497 aaPredicted RBP28.75■■■□□ 2.19
CPNE1-208ENST00000414711 PTPRGP23470 1445 aa28.73■■■□□ 2.19
CPNE1-208ENST00000414711 FBXO41Q8TF61 875 aa28.73■■■□□ 2.19
CPNE1-208ENST00000414711 TTBK1Q5TCY1 1321 aaPredicted RBP28.65■■■□□ 2.18
CPNE1-208ENST00000414711 MAP3K4Q9Y6R4 1608 aa28.63■■■□□ 2.17
CPNE1-208ENST00000414711 TEX14Q8IWB6 1497 aa28.63■■■□□ 2.17
CPNE1-208ENST00000414711 CUL7Q14999 1698 aa28.63■■■□□ 2.17
CPNE1-208ENST00000414711 TNIKQ9UKE5 1360 aa28.61■■■□□ 2.17
CPNE1-208ENST00000414711 EPRSP07814 1512 aaKnown RBP28.59■■■□□ 2.17
CPNE1-208ENST00000414711 UHRF1BP1LA0JNW5 1464 aa28.58■■■□□ 2.17
CPNE1-208ENST00000414711 CARMIL2Q6F5E8 1435 aa28.55■■■□□ 2.16
CPNE1-208ENST00000414711 UACAQ9BZF9 1416 aa28.5■■■□□ 2.15
CPNE1-208ENST00000414711 IGF1RP08069 1367 aa28.5■■■□□ 2.15
CPNE1-208ENST00000414711 KDM5BQ9UGL1 1544 aa28.46■■■□□ 2.15
CPNE1-208ENST00000414711 KIF27Q86VH2 1401 aa28.41■■■□□ 2.14
CPNE1-208ENST00000414711 ZCCHC11Q5TAX3 1644 aaKnown RBP28.4■■■□□ 2.14
CPNE1-208ENST00000414711 IQGAP2Q13576 1575 aa28.4■■■□□ 2.14
CPNE1-208ENST00000414711 SUPT5HO00267 1087 aaKnown RBP28.37■■■□□ 2.13
CPNE1-208ENST00000414711 KIF21BO75037 1637 aa28.35■■■□□ 2.13
CPNE1-208ENST00000414711 LMTK3Q96Q04 1460 aa28.34■■■□□ 2.13
CPNE1-208ENST00000414711 DISP1Q96F81 1524 aa28.33■■■□□ 2.13
CPNE1-208ENST00000414711 WDR7Q9Y4E6 1490 aa28.33■■■□□ 2.13
CPNE1-208ENST00000414711 CARMIL1Q5VZK9 1371 aa28.29■■■□□ 2.12
CPNE1-208ENST00000414711 MAGI3Q5TCQ9 1506 aa28.28■■■□□ 2.12
CPNE1-208ENST00000414711 CD109Q6YHK3 1445 aa28.23■■■□□ 2.11
CPNE1-208ENST00000414711 CFAP43Q8NDM7 1665 aa28.23■■■□□ 2.11
CPNE1-208ENST00000414711 PTPRMP28827 1452 aa28.22■■■□□ 2.11
CPNE1-208ENST00000414711 UGGT2Q9NYU1 1516 aa28.18■■■□□ 2.1
CPNE1-208ENST00000414711 KIAA0556O60303 1618 aa28.17■■■□□ 2.1
CPNE1-208ENST00000414711 PCF11O94913 1555 aaKnown RBP28.16■■■□□ 2.1
CPNE1-208ENST00000414711 ADAMTSL3P82987 1691 aa28.16■■■□□ 2.1
CPNE1-208ENST00000414711 ARAP3Q8WWN8 1544 aa28.08■■■□□ 2.09
CPNE1-208ENST00000414711 KCNH8Q96L42 1107 aa28.07■■■□□ 2.08
CPNE1-208ENST00000414711 MADDQ8WXG6 1647 aa28■■■□□ 2.07
CPNE1-208ENST00000414711 SOCS7O14512 581 aa28■■■□□ 2.07
CPNE1-208ENST00000414711 BCORL1Q5H9F3 1711 aa27.99■■■□□ 2.07
CPNE1-208ENST00000414711 ILDR2Q71H61 639 aa27.98■■■□□ 2.07
CPNE1-208ENST00000414711 ABCA8O94911 1581 aa27.96■■■□□ 2.07
CPNE1-208ENST00000414711 DISP3Q9P2K9 1392 aa27.96■■■□□ 2.07
CPNE1-208ENST00000414711 RAPGEF2Q9Y4G8 1499 aa27.94■■■□□ 2.06
CPNE1-208ENST00000414711 CERKQ8TCT0 537 aa27.91■■■□□ 2.06
CPNE1-208ENST00000414711 PHLDB1Q86UU1 1377 aa27.88■■■□□ 2.05
CPNE1-208ENST00000414711 ARID4BQ4LE39 1312 aaPredicted RBP27.87■■■□□ 2.05
CPNE1-208ENST00000414711 HSPA2P54652 639 aa27.86■■■□□ 2.05
CPNE1-208ENST00000414711 RIMS1Q86UR5 1692 aaKnown RBP27.86■■■□□ 2.05
CPNE1-208ENST00000414711 RAPGEF3O95398 923 aa27.85■■■□□ 2.05
CPNE1-208ENST00000414711 GOLGA3Q08378 1498 aa27.84■■■□□ 2.05
CPNE1-208ENST00000414711 FRMPD1Q5SYB0 1578 aa27.83■■■□□ 2.05
CPNE1-208ENST00000414711 ABCA9Q8IUA7 1624 aa27.81■■■□□ 2.04
CPNE1-208ENST00000414711 CTTNBP2Q8WZ74 1663 aa27.78■■■□□ 2.04
CPNE1-208ENST00000414711 NEO1Q92859 1461 aa27.78■■■□□ 2.04
CPNE1-208ENST00000414711 ARHGEF40Q8TER5 1519 aa27.77■■■□□ 2.04
CPNE1-208ENST00000414711 SPATA31D1Q6ZQQ2 1576 aa27.73■■■□□ 2.03
CPNE1-208ENST00000414711 ARID3CA6NKF2 412 aa27.71■■■□□ 2.03
CPNE1-208ENST00000414711 ATP10BO94823 1461 aa27.7■■■□□ 2.02
CPNE1-208ENST00000414711 PLPPR3Q6T4P5 718 aa27.69■■■□□ 2.02
CPNE1-208ENST00000414711 POGZQ7Z3K3 1410 aa27.63■■■□□ 2.01
CPNE1-208ENST00000414711 FANCAO15360 1455 aa27.63■■■□□ 2.01
CPNE1-208ENST00000414711 RICTORQ6R327 1708 aa27.58■■■□□ 2.01
CPNE1-208ENST00000414711 DENND4BO75064 1496 aaPredicted RBP27.57■■■□□ 2
CPNE1-208ENST00000414711 AKNAQ7Z591 1439 aa27.57■■■□□ 2
CPNE1-208ENST00000414711 TTC37Q6PGP7 1564 aa27.56■■■□□ 2
CPNE1-208ENST00000414711 SIGLEC1Q9BZZ2 1709 aa27.55■■■□□ 2
CPNE1-208ENST00000414711 FAM9AQ8IZU1 332 aaPredicted RBP27.54■■■□□ 2
CPNE1-208ENST00000414711 FER1L4A9Z1Z3 1794 aa27.53■■■□□ 2
CPNE1-208ENST00000414711 FHOD3Q2V2M9 1422 aa27.53■■■□□ 2
CPNE1-208ENST00000414711 ZMYM4Q5VZL5 1548 aa27.51■■■□□ 2
CPNE1-208ENST00000414711 ZFYVE16Q7Z3T8 1539 aa27.51■■□□□ 1.99
CPNE1-208ENST00000414711 YEATS2Q9ULM3 1422 aa27.5■■□□□ 1.99
CPNE1-208ENST00000414711 PREX1Q8TCU6 1659 aa27.49■■□□□ 1.99
CPNE1-208ENST00000414711 EFCAB5A4FU69 1503 aa27.49■■□□□ 1.99
CPNE1-208ENST00000414711 CFAP74Q9C0B2 1584 aa27.46■■□□□ 1.99
CPNE1-208ENST00000414711 RAPGEF6Q8TEU7 1601 aa27.45■■□□□ 1.99
CPNE1-208ENST00000414711 MLECQ14165 292 aa27.45■■□□□ 1.98
CPNE1-208ENST00000414711 P3H3Q8IVL6 736 aa27.44■■□□□ 1.98
CPNE1-208ENST00000414711 DMRT2Q9Y5R5 561 aa27.44■■□□□ 1.98
CPNE1-208ENST00000414711 STRCQ7RTU9 1775 aa27.43■■□□□ 1.98
CPNE1-208ENST00000414711 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.42■■□□□ 1.98
CPNE1-208ENST00000414711 HNRNPUL2Q1KMD3 747 aaKnown RBP27.42■■□□□ 1.98
CPNE1-208ENST00000414711 MAGI2Q86UL8 1455 aa27.4■■□□□ 1.98
CPNE1-208ENST00000414711 ARHGEF12Q9NZN5 1544 aa27.39■■□□□ 1.98
CPNE1-208ENST00000414711 PRXQ9BXM0 1461 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms