RNA–Protein interactions for RNA: ENST00000414241.7

RBBP4-204, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBBP4, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-204ENST00000414241 EIF4G3O43432 1585 aaKnown RBP22.77■■□□□ 1.23
RBBP4-204ENST00000414241 EFCAB5A4FU69 1503 aa22.76■■□□□ 1.23
RBBP4-204ENST00000414241 PPARGC1BQ86YN6 1023 aaKnown RBP22.75■■□□□ 1.23
RBBP4-204ENST00000414241 MAGI1Q96QZ7 1491 aaPredicted RBP22.74■■□□□ 1.23
RBBP4-204ENST00000414241 CTTNBP2Q8WZ74 1663 aa22.73■■□□□ 1.23
RBBP4-204ENST00000414241 SNAPC4Q5SXM2 1469 aa22.72■■□□□ 1.23
RBBP4-204ENST00000414241 SYNJ2O15056 1496 aa22.64■■□□□ 1.21
RBBP4-204ENST00000414241 GRIN2AQ12879 1464 aa22.63■■□□□ 1.21
RBBP4-204ENST00000414241 CHMP7Q8WUX9 453 aaPredicted RBP22.62■■□□□ 1.21
RBBP4-204ENST00000414241 KIAA0586Q9BVV6 1533 aa22.59■■□□□ 1.21
RBBP4-204ENST00000414241 FMN1Q68DA7 1419 aa22.59■■□□□ 1.21
RBBP4-204ENST00000414241 MAP3K1Q13233 1512 aa22.59■■□□□ 1.21
RBBP4-204ENST00000414241 IQGAP2Q13576 1575 aa22.59■■□□□ 1.21
RBBP4-204ENST00000414241 SAMD9Q5K651 1589 aa22.59■■□□□ 1.21
RBBP4-204ENST00000414241 P3H3Q8IVL6 736 aa22.58■■□□□ 1.21
RBBP4-204ENST00000414241 FHOD3Q2V2M9 1422 aa22.58■■□□□ 1.2
RBBP4-204ENST00000414241 TTBK1Q5TCY1 1321 aaPredicted RBP22.54■■□□□ 1.2
RBBP4-204ENST00000414241 CASKIN1Q8WXD9 1431 aa22.53■■□□□ 1.2
RBBP4-204ENST00000414241 UGGT2Q9NYU1 1516 aa22.52■■□□□ 1.2
RBBP4-204ENST00000414241 FYCO1Q9BQS8 1478 aa22.51■■□□□ 1.19
RBBP4-204ENST00000414241 FBLN2P98095 1184 aa22.48■■□□□ 1.19
RBBP4-204ENST00000414241 NUP160Q12769 1436 aa22.48■■□□□ 1.19
RBBP4-204ENST00000414241 KANK4Q5T7N3 995 aaPredicted RBP22.47■■□□□ 1.19
RBBP4-204ENST00000414241 TIAM1Q13009 1591 aa22.45■■□□□ 1.18
RBBP4-204ENST00000414241 PCF11O94913 1555 aaKnown RBP22.44■■□□□ 1.18
RBBP4-204ENST00000414241 HRCP23327 699 aa22.43■■□□□ 1.18
RBBP4-204ENST00000414241 CEP170Q5SW79 1584 aa22.42■■□□□ 1.18
RBBP4-204ENST00000414241 ATP1B4Q9UN42 357 aaPredicted RBP22.39■■□□□ 1.17
RBBP4-204ENST00000414241 LRRC9Q6ZRR7 1453 aa22.38■■□□□ 1.17
RBBP4-204ENST00000414241 DISP1Q96F81 1524 aa22.36■■□□□ 1.17
RBBP4-204ENST00000414241 JPH4Q96JJ6 628 aa22.35■■□□□ 1.17
RBBP4-204ENST00000414241 CFAP43Q8NDM7 1665 aa22.34■■□□□ 1.17
RBBP4-204ENST00000414241 KIAA0556O60303 1618 aa22.34■■□□□ 1.17
RBBP4-204ENST00000414241 CARMIL2Q6F5E8 1435 aa22.33■■□□□ 1.17
RBBP4-204ENST00000414241 CCDC18Q5T9S5 1454 aa22.29■■□□□ 1.16
RBBP4-204ENST00000414241 RRBP1Q9P2E9 1410 aaKnown RBP22.29■■□□□ 1.16
RBBP4-204ENST00000414241 HECW1Q76N89 1606 aa22.26■■□□□ 1.15
RBBP4-204ENST00000414241 ZEB1P37275 1124 aaPredicted RBP22.25■■□□□ 1.15
RBBP4-204ENST00000414241 MTUS2Q5JR59 1369 aa22.23■■□□□ 1.15
RBBP4-204ENST00000414241 CCNB3Q8WWL7 1395 aa22.23■■□□□ 1.15
RBBP4-204ENST00000414241 CHD1O14646 1710 aa22.19■■□□□ 1.14
RBBP4-204ENST00000414241 EPRSP07814 1512 aaKnown RBP22.19■■□□□ 1.14
RBBP4-204ENST00000414241 PHLDB1Q86UU1 1377 aa22.16■■□□□ 1.14
RBBP4-204ENST00000414241 HNRNPUL2Q1KMD3 747 aaKnown RBP22.16■■□□□ 1.14
RBBP4-204ENST00000414241 EHBP1L1Q8N3D4 1523 aa22.15■■□□□ 1.14
RBBP4-204ENST00000414241 PRG4Q92954 1404 aaPredicted RBP22.15■■□□□ 1.14
RBBP4-204ENST00000414241 RAPGEF6Q8TEU7 1601 aa22.13■■□□□ 1.13
RBBP4-204ENST00000414241 CDK11AQ9UQ88 783 aaPredicted RBP22.12■■□□□ 1.13
RBBP4-204ENST00000414241 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.11■■□□□ 1.13
RBBP4-204ENST00000414241 NUP153P49790 1475 aaKnown RBP22.11■■□□□ 1.13
RBBP4-204ENST00000414241 LRRIQ1Q96JM4 1722 aa22.11■■□□□ 1.13
RBBP4-204ENST00000414241 SHROOM2Q13796 1616 aa22.09■■□□□ 1.13
RBBP4-204ENST00000414241 PTPRGP23470 1445 aa22.08■■□□□ 1.12
RBBP4-204ENST00000414241 CCER1Q8TC90 406 aaPredicted RBP22.07■■□□□ 1.12
RBBP4-204ENST00000414241 NCOA2Q15596 1464 aa22.07■■□□□ 1.12
RBBP4-204ENST00000414241 PLB1Q6P1J6 1458 aa22.06■■□□□ 1.12
RBBP4-204ENST00000414241 SUPT6HQ7KZ85 1726 aaKnown RBP22.05■■□□□ 1.12
RBBP4-204ENST00000414241 CDK13Q14004 1512 aaKnown RBP22.05■■□□□ 1.12
RBBP4-204ENST00000414241 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.05■■□□□ 1.12
RBBP4-204ENST00000414241 CLASP1Q7Z460 1538 aa22.05■■□□□ 1.12
RBBP4-204ENST00000414241 ARHGEF11O15085 1522 aa22.03■■□□□ 1.12
RBBP4-204ENST00000414241 MAGI3Q5TCQ9 1506 aa22.03■■□□□ 1.12
RBBP4-204ENST00000414241 ABCA8O94911 1581 aa22.03■■□□□ 1.12
RBBP4-204ENST00000414241 MYOM3Q5VTT5 1437 aa22.03■■□□□ 1.12
RBBP4-204ENST00000414241 FGD6Q6ZV73 1430 aa22.03■■□□□ 1.12
RBBP4-204ENST00000414241 FAM50AQ14320 339 aaKnown RBP21.99■■□□□ 1.11
RBBP4-204ENST00000414241 ARID3CA6NKF2 412 aa21.98■■□□□ 1.11
RBBP4-204ENST00000414241 TROQ12816 1431 aaPredicted RBP21.95■■□□□ 1.11
RBBP4-204ENST00000414241 MIA2Q96PC5 1412 aa21.95■■□□□ 1.1
RBBP4-204ENST00000414241 UACAQ9BZF9 1416 aa21.94■■□□□ 1.1
RBBP4-204ENST00000414241 PLEKHD1A6NEE1 506 aa21.92■■□□□ 1.1
RBBP4-204ENST00000414241 ITGAEP38570 1179 aa21.92■■□□□ 1.1
RBBP4-204ENST00000414241 ATP10BO94823 1461 aa21.92■■□□□ 1.1
RBBP4-204ENST00000414241 OSCARQ8IYS5 282 aa21.9■■□□□ 1.1
RBBP4-204ENST00000414241 TCOF1Q13428 1488 aaKnown RBP21.89■■□□□ 1.09
RBBP4-204ENST00000414241 ERCC6L2Q5T890 1561 aa21.86■■□□□ 1.09
RBBP4-204ENST00000414241 CLSPNQ9HAW4 1339 aa21.84■■□□□ 1.09
RBBP4-204ENST00000414241 PTPN23Q9H3S7 1636 aa21.84■■□□□ 1.09
RBBP4-204ENST00000414241 SETD5Q9C0A6 1442 aa21.84■■□□□ 1.09
RBBP4-204ENST00000414241 ABCC2Q92887 1545 aa21.83■■□□□ 1.09
RBBP4-204ENST00000414241 UHRF1BP1LA0JNW5 1464 aa21.83■■□□□ 1.08
RBBP4-204ENST00000414241 ADCY10Q96PN6 1610 aa21.82■■□□□ 1.08
RBBP4-204ENST00000414241 RAB3GAP2Q9H2M9 1393 aa21.78■■□□□ 1.08
RBBP4-204ENST00000414241 DHX57Q6P158 1386 aaKnown RBP21.75■■□□□ 1.07
RBBP4-204ENST00000414241 GPATCH8Q9UKJ3 1502 aaKnown RBP21.75■■□□□ 1.07
RBBP4-204ENST00000414241 CFDP1Q9UEE9 299 aaPredicted RBP21.75■■□□□ 1.07
RBBP4-204ENST00000414241 KIF14Q15058 1648 aa21.75■■□□□ 1.07
RBBP4-204ENST00000414241 HFM1A2PYH4 1435 aa21.73■■□□□ 1.07
RBBP4-204ENST00000414241 PTPRKQ15262 1439 aa21.72■■□□□ 1.07
RBBP4-204ENST00000414241 ABCC10Q5T3U5 1492 aa21.72■■□□□ 1.07
RBBP4-204ENST00000414241 ITSN2Q9NZM3 1697 aa21.71■■□□□ 1.07
RBBP4-204ENST00000414241 KDM5BQ9UGL1 1544 aa21.71■■□□□ 1.07
RBBP4-204ENST00000414241 AKNAQ7Z591 1439 aa21.7■■□□□ 1.06
RBBP4-204ENST00000414241 ACIN1Q9UKV3 1341 aaKnown RBP21.67■■□□□ 1.06
RBBP4-204ENST00000414241 ROCK1Q13464 1354 aa21.65■■□□□ 1.06
RBBP4-204ENST00000414241 DAPK1P53355 1430 aa21.65■■□□□ 1.06
RBBP4-204ENST00000414241 NAIPQ13075 1403 aa21.65■■□□□ 1.06
RBBP4-204ENST00000414241 ZNF644Q9H582 1327 aaPredicted RBP21.63■■□□□ 1.05
RBBP4-204ENST00000414241 CAMSAP2Q08AD1 1489 aa21.63■■□□□ 1.05
RBBP4-204ENST00000414241 ABCC5O15440 1437 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms