RNA–Protein interactions for RNA: ENST00000412036.6

CXXC1-202, Transcript of CXXC finger protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXXC1, Length 2,280 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-202ENST00000412036 MAGI1Q96QZ7 1491 aaPredicted RBP28.53■■■□□ 2.16
CXXC1-202ENST00000412036 VPS8Q8N3P4 1428 aa28.5■■■□□ 2.15
CXXC1-202ENST00000412036 GRIN2AQ12879 1464 aa28.5■■■□□ 2.15
CXXC1-202ENST00000412036 SYNJ2O15056 1496 aa28.47■■■□□ 2.15
CXXC1-202ENST00000412036 P3H3Q8IVL6 736 aa28.47■■■□□ 2.15
CXXC1-202ENST00000412036 FBLN2P98095 1184 aa28.44■■■□□ 2.14
CXXC1-202ENST00000412036 CHMP7Q8WUX9 453 aaPredicted RBP28.41■■■□□ 2.14
CXXC1-202ENST00000412036 CEP170Q5SW79 1584 aa28.41■■■□□ 2.14
CXXC1-202ENST00000412036 FHOD3Q2V2M9 1422 aa28.39■■■□□ 2.14
CXXC1-202ENST00000412036 TTBK1Q5TCY1 1321 aaPredicted RBP28.37■■■□□ 2.13
CXXC1-202ENST00000412036 IQGAP2Q13576 1575 aa28.36■■■□□ 2.13
CXXC1-202ENST00000412036 SAMD9Q5K651 1589 aa28.34■■■□□ 2.13
CXXC1-202ENST00000412036 PCGF6Q9BYE7 350 aa28.31■■■□□ 2.12
CXXC1-202ENST00000412036 NUP160Q12769 1436 aa28.3■■■□□ 2.12
CXXC1-202ENST00000412036 EFCAB5A4FU69 1503 aa28.3■■■□□ 2.12
CXXC1-202ENST00000412036 KIAA0586Q9BVV6 1533 aa28.3■■■□□ 2.12
CXXC1-202ENST00000412036 CHD1O14646 1710 aa28.29■■■□□ 2.12
CXXC1-202ENST00000412036 UGGT2Q9NYU1 1516 aa28.22■■■□□ 2.11
CXXC1-202ENST00000412036 PCF11O94913 1555 aaKnown RBP28.2■■■□□ 2.11
CXXC1-202ENST00000412036 DISP1Q96F81 1524 aa28.19■■■□□ 2.1
CXXC1-202ENST00000412036 TRIM26Q12899 539 aaPredicted RBP28.18■■■□□ 2.1
CXXC1-202ENST00000412036 KANK4Q5T7N3 995 aaPredicted RBP28.17■■■□□ 2.1
CXXC1-202ENST00000412036 KIAA0556O60303 1618 aa28.11■■■□□ 2.09
CXXC1-202ENST00000412036 JPH4Q96JJ6 628 aa28.08■■■□□ 2.09
CXXC1-202ENST00000412036 LRRIQ1Q96JM4 1722 aa28.06■■■□□ 2.08
CXXC1-202ENST00000412036 CASKIN1Q8WXD9 1431 aa28.05■■■□□ 2.08
CXXC1-202ENST00000412036 FMN1Q68DA7 1419 aa28.05■■■□□ 2.08
CXXC1-202ENST00000412036 ATP1B4Q9UN42 357 aaPredicted RBP28.03■■■□□ 2.08
CXXC1-202ENST00000412036 APLP2Q06481 763 aa28.03■■■□□ 2.08
CXXC1-202ENST00000412036 FYCO1Q9BQS8 1478 aa28.02■■■□□ 2.08
CXXC1-202ENST00000412036 TIAM1Q13009 1591 aa28.02■■■□□ 2.08
CXXC1-202ENST00000412036 ERCC6L2Q5T890 1561 aa27.94■■■□□ 2.06
CXXC1-202ENST00000412036 CFAP43Q8NDM7 1665 aa27.94■■■□□ 2.06
CXXC1-202ENST00000412036 CLASP1Q7Z460 1538 aa27.93■■■□□ 2.06
CXXC1-202ENST00000412036 PRG4Q92954 1404 aaPredicted RBP27.93■■■□□ 2.06
CXXC1-202ENST00000412036 MAP3K1Q13233 1512 aa27.92■■■□□ 2.06
CXXC1-202ENST00000412036 SHROOM2Q13796 1616 aa27.91■■■□□ 2.06
CXXC1-202ENST00000412036 LRRC9Q6ZRR7 1453 aa27.89■■■□□ 2.06
CXXC1-202ENST00000412036 ARID3CA6NKF2 412 aa27.89■■■□□ 2.05
CXXC1-202ENST00000412036 PLB1Q6P1J6 1458 aa27.86■■■□□ 2.05
CXXC1-202ENST00000412036 CARMIL2Q6F5E8 1435 aa27.85■■■□□ 2.05
CXXC1-202ENST00000412036 CDK13Q14004 1512 aaKnown RBP27.83■■■□□ 2.05
CXXC1-202ENST00000412036 MAGI3Q5TCQ9 1506 aa27.82■■■□□ 2.04
CXXC1-202ENST00000412036 NUP153P49790 1475 aaKnown RBP27.81■■■□□ 2.04
CXXC1-202ENST00000412036 HECW1Q76N89 1606 aa27.8■■■□□ 2.04
CXXC1-202ENST00000412036 EPRSP07814 1512 aaKnown RBP27.8■■■□□ 2.04
CXXC1-202ENST00000412036 RAPGEF6Q8TEU7 1601 aa27.79■■■□□ 2.04
CXXC1-202ENST00000412036 PHLDB1Q86UU1 1377 aa27.74■■■□□ 2.03
CXXC1-202ENST00000412036 ABCA8O94911 1581 aa27.71■■■□□ 2.03
CXXC1-202ENST00000412036 PTPRGP23470 1445 aa27.69■■■□□ 2.02
CXXC1-202ENST00000412036 CCDC18Q5T9S5 1454 aa27.68■■■□□ 2.02
CXXC1-202ENST00000412036 MTUS2Q5JR59 1369 aa27.66■■■□□ 2.02
CXXC1-202ENST00000412036 OSCARQ8IYS5 282 aa27.64■■■□□ 2.02
CXXC1-202ENST00000412036 RRBP1Q9P2E9 1410 aaKnown RBP27.64■■■□□ 2.02
CXXC1-202ENST00000412036 EHBP1L1Q8N3D4 1523 aa27.59■■■□□ 2.01
CXXC1-202ENST00000412036 NCOA2Q15596 1464 aa27.58■■■□□ 2.01
CXXC1-202ENST00000412036 HNRNPUL2Q1KMD3 747 aaKnown RBP27.58■■■□□ 2.01
CXXC1-202ENST00000412036 ATP10BO94823 1461 aa27.57■■■□□ 2
CXXC1-202ENST00000412036 CCNB3Q8WWL7 1395 aa27.55■■■□□ 2
CXXC1-202ENST00000412036 ARHGEF11O15085 1522 aa27.55■■■□□ 2
CXXC1-202ENST00000412036 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.54■■■□□ 2
CXXC1-202ENST00000412036 UACAQ9BZF9 1416 aa27.53■■■□□ 2
CXXC1-202ENST00000412036 SUPT6HQ7KZ85 1726 aaKnown RBP27.52■■■□□ 2
CXXC1-202ENST00000412036 ABCC2Q92887 1545 aa27.45■■□□□ 1.99
CXXC1-202ENST00000412036 KIF14Q15058 1648 aa27.45■■□□□ 1.98
CXXC1-202ENST00000412036 FGD6Q6ZV73 1430 aa27.44■■□□□ 1.98
CXXC1-202ENST00000412036 TROQ12816 1431 aaPredicted RBP27.42■■□□□ 1.98
CXXC1-202ENST00000412036 MYOM3Q5VTT5 1437 aa27.42■■□□□ 1.98
CXXC1-202ENST00000412036 ITGAEP38570 1179 aa27.42■■□□□ 1.98
CXXC1-202ENST00000412036 FAM50AQ14320 339 aaKnown RBP27.39■■□□□ 1.98
CXXC1-202ENST00000412036 ADCY10Q96PN6 1610 aa27.37■■□□□ 1.97
CXXC1-202ENST00000412036 CDK11AQ9UQ88 783 aaPredicted RBP27.34■■□□□ 1.97
CXXC1-202ENST00000412036 UHRF1BP1LA0JNW5 1464 aa27.34■■□□□ 1.97
CXXC1-202ENST00000412036 ZCCHC11Q5TAX3 1644 aaKnown RBP27.32■■□□□ 1.96
CXXC1-202ENST00000412036 HRCP23327 699 aa27.32■■□□□ 1.96
CXXC1-202ENST00000412036 PLEKHD1A6NEE1 506 aa27.31■■□□□ 1.96
CXXC1-202ENST00000412036 PTPN23Q9H3S7 1636 aa27.3■■□□□ 1.96
CXXC1-202ENST00000412036 PTPRKQ15262 1439 aa27.3■■□□□ 1.96
CXXC1-202ENST00000412036 KDM5BQ9UGL1 1544 aa27.3■■□□□ 1.96
CXXC1-202ENST00000412036 ABCC10Q5T3U5 1492 aa27.28■■□□□ 1.96
CXXC1-202ENST00000412036 ZNF644Q9H582 1327 aaPredicted RBP27.27■■□□□ 1.96
CXXC1-202ENST00000412036 GPATCH8Q9UKJ3 1502 aaKnown RBP27.26■■□□□ 1.95
CXXC1-202ENST00000412036 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.24■■□□□ 1.952e-6■■■■□ 21.4
CXXC1-202ENST00000412036 TCOF1Q13428 1488 aaKnown RBP27.24■■□□□ 1.95
CXXC1-202ENST00000412036 CDC42BPAQ5VT25 1732 aa27.2■■□□□ 1.95
CXXC1-202ENST00000412036 MIA2Q96PC5 1412 aa27.19■■□□□ 1.94
CXXC1-202ENST00000412036 TTC37Q6PGP7 1564 aa27.17■■□□□ 1.94
CXXC1-202ENST00000412036 RIMBP3CA6NJZ7 1639 aa27.15■■□□□ 1.94
CXXC1-202ENST00000412036 RIMBP3BA6NNM3 1639 aa27.15■■□□□ 1.94
CXXC1-202ENST00000412036 KCNH8Q96L42 1107 aa27.15■■□□□ 1.94
CXXC1-202ENST00000412036 RIMBP3Q9UFD9 1639 aa27.15■■□□□ 1.94
CXXC1-202ENST00000412036 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.15■■□□□ 1.94
CXXC1-202ENST00000412036 CFDP1Q9UEE9 299 aaPredicted RBP27.11■■□□□ 1.93
CXXC1-202ENST00000412036 CCER1Q8TC90 406 aaPredicted RBP27.1■■□□□ 1.93
CXXC1-202ENST00000412036 ITSN2Q9NZM3 1697 aa27.1■■□□□ 1.93
CXXC1-202ENST00000412036 CAMSAP2Q08AD1 1489 aa27.09■■□□□ 1.93
CXXC1-202ENST00000412036 CDC42BPBQ9Y5S2 1711 aa27.09■■□□□ 1.93
CXXC1-202ENST00000412036 ZNF777Q9ULD5 760 aaPredicted RBP27.09■■□□□ 1.93
CXXC1-202ENST00000412036 RAB3GAP2Q9H2M9 1393 aa27.08■■□□□ 1.92
CXXC1-202ENST00000412036 CYB5RLQ6IPT4 315 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms