RNA–Protein interactions for RNA: ENST00000412011.5

ITSN2-205, Transcript of intersectin 2, humanhuman

TSL 1 (best)

Gene ITSN2, Length 2,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-205ENST00000412011 EFCAB5A4FU69 1503 aa31.59■■■□□ 2.65
ITSN2-205ENST00000412011 ZNF608Q9ULD9 1512 aaPredicted RBP31.59■■■□□ 2.65
ITSN2-205ENST00000412011 GRIN2BQ13224 1484 aa31.58■■■□□ 2.65
ITSN2-205ENST00000412011 ADAMTS12P58397 1594 aa31.58■■■□□ 2.65
ITSN2-205ENST00000412011 FHAD1B1AJZ9 1412 aa31.56■■■□□ 2.64
ITSN2-205ENST00000412011 KANK4Q5T7N3 995 aaPredicted RBP31.51■■■□□ 2.63
ITSN2-205ENST00000412011 P3H3Q8IVL6 736 aa31.49■■■□□ 2.63
ITSN2-205ENST00000412011 FHOD3Q2V2M9 1422 aa31.48■■■□□ 2.63
ITSN2-205ENST00000412011 ZEB1P37275 1124 aaPredicted RBP31.48■■■□□ 2.63
ITSN2-205ENST00000412011 EIF4G3O43432 1585 aaKnown RBP31.48■■■□□ 2.63
ITSN2-205ENST00000412011 MAP3K1Q13233 1512 aa31.45■■■□□ 2.63
ITSN2-205ENST00000412011 PCF11O94913 1555 aaKnown RBP31.45■■■□□ 2.62
ITSN2-205ENST00000412011 SAMD9Q5K651 1589 aa31.45■■■□□ 2.62
ITSN2-205ENST00000412011 TIAM1Q13009 1591 aa31.43■■■□□ 2.62
ITSN2-205ENST00000412011 SNAPC4Q5SXM2 1469 aa31.36■■■□□ 2.61
ITSN2-205ENST00000412011 CFAP43Q8NDM7 1665 aa31.36■■■□□ 2.61
ITSN2-205ENST00000412011 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.36■■■□□ 2.61
ITSN2-205ENST00000412011 FYCO1Q9BQS8 1478 aa31.34■■■□□ 2.61
ITSN2-205ENST00000412011 IQGAP2Q13576 1575 aa31.32■■■□□ 2.6
ITSN2-205ENST00000412011 CASKIN1Q8WXD9 1431 aa31.32■■■□□ 2.6
ITSN2-205ENST00000412011 FMN1Q68DA7 1419 aa31.3■■■□□ 2.6
ITSN2-205ENST00000412011 LRRC9Q6ZRR7 1453 aa31.27■■■□□ 2.6
ITSN2-205ENST00000412011 HNRNPUL2Q1KMD3 747 aaKnown RBP31.26■■■□□ 2.6
ITSN2-205ENST00000412011 CCER1Q8TC90 406 aaPredicted RBP31.26■■■□□ 2.59
ITSN2-205ENST00000412011 MAGI1Q96QZ7 1491 aaPredicted RBP31.25■■■□□ 2.59
ITSN2-205ENST00000412011 RRBP1Q9P2E9 1410 aaKnown RBP31.24■■■□□ 2.59
ITSN2-205ENST00000412011 GRIN2AQ12879 1464 aa31.22■■■□□ 2.59
ITSN2-205ENST00000412011 ATP1B4Q9UN42 357 aaPredicted RBP31.2■■■□□ 2.58
ITSN2-205ENST00000412011 UGGT2Q9NYU1 1516 aa31.16■■■□□ 2.58
ITSN2-205ENST00000412011 KIAA0586Q9BVV6 1533 aa31.15■■■□□ 2.58
ITSN2-205ENST00000412011 LRRIQ1Q96JM4 1722 aa31.14■■■□□ 2.58
ITSN2-205ENST00000412011 SYNJ2O15056 1496 aa31.14■■■□□ 2.57
ITSN2-205ENST00000412011 CCNB3Q8WWL7 1395 aa31.1■■■□□ 2.57
ITSN2-205ENST00000412011 CEP170Q5SW79 1584 aa31.05■■■□□ 2.56
ITSN2-205ENST00000412011 CHMP7Q8WUX9 453 aaPredicted RBP31.05■■■□□ 2.56
ITSN2-205ENST00000412011 PHLDB1Q86UU1 1377 aa31.03■■■□□ 2.56
ITSN2-205ENST00000412011 KIAA0556O60303 1618 aa31■■■□□ 2.55
ITSN2-205ENST00000412011 DISP1Q96F81 1524 aa30.99■■■□□ 2.55
ITSN2-205ENST00000412011 HECW1Q76N89 1606 aa30.96■■■□□ 2.55
ITSN2-205ENST00000412011 NUP160Q12769 1436 aa30.95■■■□□ 2.55
ITSN2-205ENST00000412011 FBLN2P98095 1184 aa30.95■■■□□ 2.55
ITSN2-205ENST00000412011 CCDC18Q5T9S5 1454 aa30.92■■■□□ 2.54
ITSN2-205ENST00000412011 MTUS2Q5JR59 1369 aa30.92■■■□□ 2.54
ITSN2-205ENST00000412011 EHBP1L1Q8N3D4 1523 aa30.86■■■□□ 2.53
ITSN2-205ENST00000412011 EPRSP07814 1512 aaKnown RBP30.84■■■□□ 2.53
ITSN2-205ENST00000412011 SUPT6HQ7KZ85 1726 aaKnown RBP30.83■■■□□ 2.53
ITSN2-205ENST00000412011 MAGI3Q5TCQ9 1506 aa30.82■■■□□ 2.52
ITSN2-205ENST00000412011 ITGAEP38570 1179 aa30.81■■■□□ 2.52
ITSN2-205ENST00000412011 NCOA2Q15596 1464 aa30.79■■■□□ 2.52
ITSN2-205ENST00000412011 CDK13Q14004 1512 aaKnown RBP30.78■■■□□ 2.52
ITSN2-205ENST00000412011 FAM50AQ14320 339 aaKnown RBP30.77■■■□□ 2.52
ITSN2-205ENST00000412011 RAPGEF6Q8TEU7 1601 aa30.77■■■□□ 2.52
ITSN2-205ENST00000412011 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.76■■■□□ 2.52
ITSN2-205ENST00000412011 JPH4Q96JJ6 628 aa30.76■■■□□ 2.51
ITSN2-205ENST00000412011 CHD1O14646 1710 aa30.76■■■□□ 2.51
ITSN2-205ENST00000412011 FGD6Q6ZV73 1430 aa30.75■■■□□ 2.51
ITSN2-205ENST00000412011 ARHGEF11O15085 1522 aa30.73■■■□□ 2.51
ITSN2-205ENST00000412011 CARMIL2Q6F5E8 1435 aa30.72■■■□□ 2.51
ITSN2-205ENST00000412011 NUP153P49790 1475 aaKnown RBP30.7■■■□□ 2.51
ITSN2-205ENST00000412011 MYOM3Q5VTT5 1437 aa30.69■■■□□ 2.5
ITSN2-205ENST00000412011 DHX57Q6P158 1386 aaKnown RBP30.69■■■□□ 2.5
ITSN2-205ENST00000412011 ARID3CA6NKF2 412 aa30.64■■■□□ 2.5
ITSN2-205ENST00000412011 RAB3GAP2Q9H2M9 1393 aa30.61■■■□□ 2.49
ITSN2-205ENST00000412011 SETD5Q9C0A6 1442 aa30.61■■■□□ 2.49
ITSN2-205ENST00000412011 PLB1Q6P1J6 1458 aa30.6■■■□□ 2.49
ITSN2-205ENST00000412011 CLSPNQ9HAW4 1339 aa30.59■■■□□ 2.49
ITSN2-205ENST00000412011 PTPN23Q9H3S7 1636 aa30.59■■■□□ 2.49
ITSN2-205ENST00000412011 PRG4Q92954 1404 aaPredicted RBP30.52■■■□□ 2.48
ITSN2-205ENST00000412011 ABCA8O94911 1581 aa30.52■■■□□ 2.48
ITSN2-205ENST00000412011 TCOF1Q13428 1488 aaKnown RBP30.5■■■□□ 2.47
ITSN2-205ENST00000412011 SHROOM2Q13796 1616 aa30.49■■■□□ 2.47
ITSN2-205ENST00000412011 PTPRKQ15262 1439 aa30.47■■■□□ 2.47
ITSN2-205ENST00000412011 CDK11AQ9UQ88 783 aaPredicted RBP30.46■■■□□ 2.47
ITSN2-205ENST00000412011 MIA2Q96PC5 1412 aa30.45■■■□□ 2.47
ITSN2-205ENST00000412011 TROQ12816 1431 aaPredicted RBP30.42■■■□□ 2.46
ITSN2-205ENST00000412011 ADCY10Q96PN6 1610 aa30.38■■■□□ 2.45
ITSN2-205ENST00000412011 PTPRGP23470 1445 aa30.38■■■□□ 2.45
ITSN2-205ENST00000412011 MAPKBP1O60336 1514 aa30.36■■■□□ 2.45
ITSN2-205ENST00000412011 HFM1A2PYH4 1435 aa30.36■■■□□ 2.45
ITSN2-205ENST00000412011 ATP10BO94823 1461 aa30.34■■■□□ 2.45
ITSN2-205ENST00000412011 CLASP1Q7Z460 1538 aa30.33■■■□□ 2.45
ITSN2-205ENST00000412011 KIF14Q15058 1648 aa30.32■■■□□ 2.45
ITSN2-205ENST00000412011 ERCC6L2Q5T890 1561 aa30.3■■■□□ 2.44
ITSN2-205ENST00000412011 NAIPQ13075 1403 aa30.29■■■□□ 2.44
ITSN2-205ENST00000412011 ITSN2Q9NZM3 1697 aa30.29■■■□□ 2.44
ITSN2-205ENST00000412011 GCC2Q8IWJ2 1684 aa30.24■■■□□ 2.43
ITSN2-205ENST00000412011 PLEKHD1A6NEE1 506 aa30.22■■■□□ 2.43
ITSN2-205ENST00000412011 UACAQ9BZF9 1416 aa30.22■■■□□ 2.43
ITSN2-205ENST00000412011 DNMT1P26358 1616 aaKnown RBP30.21■■■□□ 2.43
ITSN2-205ENST00000412011 GPATCH8Q9UKJ3 1502 aaKnown RBP30.21■■■□□ 2.43
ITSN2-205ENST00000412011 AKNAQ7Z591 1439 aa30.2■■■□□ 2.43
ITSN2-205ENST00000412011 ZNF316A6NFI3 1004 aaPredicted RBP30.19■■■□□ 2.42
ITSN2-205ENST00000412011 CHIC2Q9UKJ5 165 aa30.18■■■□□ 2.42
ITSN2-205ENST00000412011 ZNF644Q9H582 1327 aaPredicted RBP30.17■■■□□ 2.42
ITSN2-205ENST00000412011 DAPK1P53355 1430 aa30.17■■■□□ 2.42
ITSN2-205ENST00000412011 CDC42BPAQ5VT25 1732 aa30.16■■■□□ 2.42
ITSN2-205ENST00000412011 ABCC10Q5T3U5 1492 aa30.15■■■□□ 2.42
ITSN2-205ENST00000412011 RRP7BPQ9NSQ0 103 aa30.15■■■□□ 2.42
ITSN2-205ENST00000412011 CAMSAP2Q08AD1 1489 aa30.14■■■□□ 2.42
ITSN2-205ENST00000412011 ABCC5O15440 1437 aa30.14■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms