RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 IGF1RP08069 1367 aa29.34■■■□□ 2.29
MRPL55-220ENST00000411464 RUSC2Q8N2Y8 1516 aa29.32■■■□□ 2.28
MRPL55-220ENST00000411464 FAM69CQ0P6D2 419 aa29.32■■■□□ 2.28
MRPL55-220ENST00000411464 KIF27Q86VH2 1401 aa29.31■■■□□ 2.28
MRPL55-220ENST00000411464 KIAA0586Q9BVV6 1533 aa29.28■■■□□ 2.28
MRPL55-220ENST00000411464 ABCC10Q5T3U5 1492 aa29.23■■■□□ 2.27
MRPL55-220ENST00000411464 KIF13AQ9H1H9 1805 aa29.18■■■□□ 2.26
MRPL55-220ENST00000411464 MAPKBP1O60336 1514 aa29.17■■■□□ 2.26
MRPL55-220ENST00000411464 CARMIL1Q5VZK9 1371 aa29.15■■■□□ 2.26
MRPL55-220ENST00000411464 CUL7Q14999 1698 aa29.14■■■□□ 2.26
MRPL55-220ENST00000411464 ADCY10Q96PN6 1610 aa29.12■■■□□ 2.25
MRPL55-220ENST00000411464 PTPRGP23470 1445 aa29.11■■■□□ 2.25
MRPL55-220ENST00000411464 TTBK1Q5TCY1 1321 aaPredicted RBP29.1■■■□□ 2.25
MRPL55-220ENST00000411464 DIP2BQ9P265 1576 aa29.05■■■□□ 2.24
MRPL55-220ENST00000411464 CARMIL2Q6F5E8 1435 aa29.04■■■□□ 2.24
MRPL55-220ENST00000411464 TNIKQ9UKE5 1360 aa29.01■■■□□ 2.24
MRPL55-220ENST00000411464 ABCC2Q92887 1545 aa28.91■■■□□ 2.22
MRPL55-220ENST00000411464 IQGAP2Q13576 1575 aa28.89■■■□□ 2.22
MRPL55-220ENST00000411464 KDM6BO15054 1643 aa28.88■■■□□ 2.21
MRPL55-220ENST00000411464 ASXL2Q76L83 1435 aa28.85■■■□□ 2.21
MRPL55-220ENST00000411464 PLB1Q6P1J6 1458 aa28.85■■■□□ 2.21
MRPL55-220ENST00000411464 UACAQ9BZF9 1416 aa28.84■■■□□ 2.21
MRPL55-220ENST00000411464 UHRF1BP1LA0JNW5 1464 aa28.83■■■□□ 2.21
MRPL55-220ENST00000411464 RAPGEF2Q9Y4G8 1499 aa28.82■■■□□ 2.2
MRPL55-220ENST00000411464 KDM4FA0A1W2PPD8 638 aa28.81■■■□□ 2.2
MRPL55-220ENST00000411464 DISP1Q96F81 1524 aa28.8■■■□□ 2.2
MRPL55-220ENST00000411464 TSPOAP1O95153 1857 aa28.8■■■□□ 2.2
MRPL55-220ENST00000411464 GLI2P10070 1586 aa28.72■■■□□ 2.19
MRPL55-220ENST00000411464 UGGT2Q9NYU1 1516 aa28.72■■■□□ 2.19
MRPL55-220ENST00000411464 KDM5BQ9UGL1 1544 aa28.69■■■□□ 2.18
MRPL55-220ENST00000411464 EPRSP07814 1512 aaKnown RBP28.65■■■□□ 2.18
MRPL55-220ENST00000411464 KIAA0556O60303 1618 aa28.61■■■□□ 2.17
MRPL55-220ENST00000411464 TEX14Q8IWB6 1497 aa28.57■■■□□ 2.16
MRPL55-220ENST00000411464 PPRC1Q5VV67 1664 aaKnown RBP28.57■■■□□ 2.16
MRPL55-220ENST00000411464 COL17A1Q9UMD9 1497 aaPredicted RBP28.54■■■□□ 2.16
MRPL55-220ENST00000411464 ZCCHC11Q5TAX3 1644 aaKnown RBP28.54■■■□□ 2.16
MRPL55-220ENST00000411464 GOLGA3Q08378 1498 aa28.53■■■□□ 2.16
MRPL55-220ENST00000411464 WDR7Q9Y4E6 1490 aa28.52■■■□□ 2.16
MRPL55-220ENST00000411464 MAP3K4Q9Y6R4 1608 aa28.51■■■□□ 2.15
MRPL55-220ENST00000411464 KCNH8Q96L42 1107 aa28.49■■■□□ 2.15
MRPL55-220ENST00000411464 FAM9AQ8IZU1 332 aaPredicted RBP28.48■■■□□ 2.15
MRPL55-220ENST00000411464 ADGRL1O94910 1474 aa28.46■■■□□ 2.15
MRPL55-220ENST00000411464 PRXQ9BXM0 1461 aa28.44■■■□□ 2.14
MRPL55-220ENST00000411464 CD109Q6YHK3 1445 aa28.42■■■□□ 2.14
MRPL55-220ENST00000411464 CTTNBP2Q8WZ74 1663 aa28.39■■■□□ 2.14
MRPL55-220ENST00000411464 ABCA8O94911 1581 aa28.37■■■□□ 2.13
MRPL55-220ENST00000411464 P3H3Q8IVL6 736 aa28.36■■■□□ 2.13
MRPL55-220ENST00000411464 MAGI3Q5TCQ9 1506 aa28.34■■■□□ 2.13
MRPL55-220ENST00000411464 ARID3CA6NKF2 412 aa28.32■■■□□ 2.12
MRPL55-220ENST00000411464 CSRNP3Q8WYN3 585 aa28.28■■■□□ 2.12
MRPL55-220ENST00000411464 CFAP43Q8NDM7 1665 aa28.25■■■□□ 2.11
MRPL55-220ENST00000411464 ATP10BO94823 1461 aa28.22■■■□□ 2.11
MRPL55-220ENST00000411464 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.18■■■□□ 2.1
MRPL55-220ENST00000411464 HNRNPUL2Q1KMD3 747 aaKnown RBP28.18■■■□□ 2.1
MRPL55-220ENST00000411464 ILDR1Q86SU0 546 aaPredicted RBP28.18■■■□□ 2.1
MRPL55-220ENST00000411464 ARAP3Q8WWN8 1544 aa28.13■■■□□ 2.09
MRPL55-220ENST00000411464 PHLDB1Q86UU1 1377 aa28.13■■■□□ 2.09
MRPL55-220ENST00000411464 RANGAP1P46060 587 aaPredicted RBP28.12■■■□□ 2.09
MRPL55-220ENST00000411464 HECW2Q9P2P5 1572 aa28.09■■■□□ 2.09
MRPL55-220ENST00000411464 RAPGEF3O95398 923 aa28.06■■■□□ 2.08
MRPL55-220ENST00000411464 SAMD9Q5K651 1589 aa28.05■■■□□ 2.08
MRPL55-220ENST00000411464 EEA1Q15075 1411 aa28.04■■■□□ 2.08
MRPL55-220ENST00000411464 ABCA9Q8IUA7 1624 aa28.03■■■□□ 2.08
MRPL55-220ENST00000411464 RAPGEF6Q8TEU7 1601 aa28.02■■■□□ 2.08
MRPL55-220ENST00000411464 PLEKHD1A6NEE1 506 aa28■■■□□ 2.07
MRPL55-220ENST00000411464 NEO1Q92859 1461 aa28■■■□□ 2.07
MRPL55-220ENST00000411464 KIF21BO75037 1637 aa27.99■■■□□ 2.07
MRPL55-220ENST00000411464 NUP153P49790 1475 aaKnown RBP27.97■■■□□ 2.07
MRPL55-220ENST00000411464 FHOD3Q2V2M9 1422 aa27.97■■■□□ 2.07
MRPL55-220ENST00000411464 ARID4BQ4LE39 1312 aaPredicted RBP27.93■■■□□ 2.06
MRPL55-220ENST00000411464 PTPRMP28827 1452 aa27.86■■■□□ 2.05
MRPL55-220ENST00000411464 DENND4BO75064 1496 aaPredicted RBP27.83■■■□□ 2.04
MRPL55-220ENST00000411464 AKNAQ7Z591 1439 aa27.82■■■□□ 2.04
MRPL55-220ENST00000411464 ADAMTSL3P82987 1691 aa27.79■■■□□ 2.04
MRPL55-220ENST00000411464 EFCAB5A4FU69 1503 aa27.79■■■□□ 2.04
MRPL55-220ENST00000411464 FANCAO15360 1455 aa27.79■■■□□ 2.04
MRPL55-220ENST00000411464 FRMPD1Q5SYB0 1578 aa27.78■■■□□ 2.04
MRPL55-220ENST00000411464 UBTFP17480 764 aaKnown RBP27.75■■■□□ 2.03
MRPL55-220ENST00000411464 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.74■■■□□ 2.03
MRPL55-220ENST00000411464 EHMT2Q96KQ7 1210 aa27.74■■■□□ 2.03
MRPL55-220ENST00000411464 ATP1B4Q9UN42 357 aaPredicted RBP27.74■■■□□ 2.03
MRPL55-220ENST00000411464 BCORL1Q5H9F3 1711 aa27.7■■■□□ 2.03
MRPL55-220ENST00000411464 POGZQ7Z3K3 1410 aa27.68■■■□□ 2.02
MRPL55-220ENST00000411464 ARHGEF40Q8TER5 1519 aa27.68■■■□□ 2.02
MRPL55-220ENST00000411464 CFAP74Q9C0B2 1584 aa27.68■■■□□ 2.02
MRPL55-220ENST00000411464 MADDQ8WXG6 1647 aa27.67■■■□□ 2.02
MRPL55-220ENST00000411464 FBXO41Q8TF61 875 aa27.66■■■□□ 2.02
MRPL55-220ENST00000411464 CDK11AQ9UQ88 783 aaPredicted RBP27.66■■■□□ 2.02
MRPL55-220ENST00000411464 CDK13Q14004 1512 aaKnown RBP27.66■■■□□ 2.02
MRPL55-220ENST00000411464 TTC37Q6PGP7 1564 aa27.65■■■□□ 2.02
MRPL55-220ENST00000411464 PLPPR3Q6T4P5 718 aa27.64■■■□□ 2.02
MRPL55-220ENST00000411464 PLCH2O75038 1416 aa27.64■■■□□ 2.02
MRPL55-220ENST00000411464 FMN1Q68DA7 1419 aa27.63■■■□□ 2.01
MRPL55-220ENST00000411464 SCAPERQ9BY12 1400 aa27.63■■■□□ 2.01
MRPL55-220ENST00000411464 RICTORQ6R327 1708 aa27.63■■■□□ 2.01
MRPL55-220ENST00000411464 YEATS2Q9ULM3 1422 aa27.62■■■□□ 2.01
MRPL55-220ENST00000411464 EFCAB2Q5VUJ9 269 aa27.62■■■□□ 2.01
MRPL55-220ENST00000411464 MAGI2Q86UL8 1455 aa27.62■■■□□ 2.01
MRPL55-220ENST00000411464 ZFYVE16Q7Z3T8 1539 aa27.61■■■□□ 2.01
MRPL55-220ENST00000411464 PCF11O94913 1555 aaKnown RBP27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms