RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 SHROOM2Q13796 1616 aa4.27□□□□□ -1.73
RNU4-53P-201ENST00000410828 ERICH3Q5RHP9 1530 aa4.26□□□□□ -1.73
RNU4-53P-201ENST00000410828 KDM6BO15054 1643 aa4.26□□□□□ -1.73
RNU4-53P-201ENST00000410828 KIF13AQ9H1H9 1805 aa4.25□□□□□ -1.73
RNU4-53P-201ENST00000410828 PTPRGP23470 1445 aa4.25□□□□□ -1.73
RNU4-53P-201ENST00000410828 DIP2BQ9P265 1576 aa4.25□□□□□ -1.73
RNU4-53P-201ENST00000410828 TTBK1Q5TCY1 1321 aaPredicted RBP4.24□□□□□ -1.73
RNU4-53P-201ENST00000410828 SUPT5HO00267 1087 aaKnown RBP4.24□□□□□ -1.73
RNU4-53P-201ENST00000410828 FBXO41Q8TF61 875 aa4.24□□□□□ -1.73
RNU4-53P-201ENST00000410828 KIAA0586Q9BVV6 1533 aa4.24□□□□□ -1.73
RNU4-53P-201ENST00000410828 ADGRL1O94910 1474 aa4.24□□□□□ -1.73
RNU4-53P-201ENST00000410828 PLB1Q6P1J6 1458 aa4.23□□□□□ -1.73
RNU4-53P-201ENST00000410828 CARMIL2Q6F5E8 1435 aa4.22□□□□□ -1.73
RNU4-53P-201ENST00000410828 ASXL2Q76L83 1435 aa4.22□□□□□ -1.73
RNU4-53P-201ENST00000410828 ADCY10Q96PN6 1610 aa4.22□□□□□ -1.73
RNU4-53P-201ENST00000410828 IGF1RP08069 1367 aa4.22□□□□□ -1.73
RNU4-53P-201ENST00000410828 TNIKQ9UKE5 1360 aa4.22□□□□□ -1.73
RNU4-53P-201ENST00000410828 ABCC2Q92887 1545 aa4.21□□□□□ -1.73
RNU4-53P-201ENST00000410828 TOP2BQ02880 1626 aa4.21□□□□□ -1.73
RNU4-53P-201ENST00000410828 COL17A1Q9UMD9 1497 aaPredicted RBP4.21□□□□□ -1.74
RNU4-53P-201ENST00000410828 RUSC2Q8N2Y8 1516 aa4.21□□□□□ -1.74
RNU4-53P-201ENST00000410828 HECW2Q9P2P5 1572 aa4.2□□□□□ -1.74
RNU4-53P-201ENST00000410828 TEX14Q8IWB6 1497 aa4.2□□□□□ -1.74
RNU4-53P-201ENST00000410828 KIF27Q86VH2 1401 aa4.2□□□□□ -1.74
RNU4-53P-201ENST00000410828 UACAQ9BZF9 1416 aa4.2□□□□□ -1.74
RNU4-53P-201ENST00000410828 TSPOAP1O95153 1857 aa4.2□□□□□ -1.74
RNU4-53P-201ENST00000410828 GLI2P10070 1586 aa4.19□□□□□ -1.74
RNU4-53P-201ENST00000410828 UHRF1BP1LA0JNW5 1464 aa4.19□□□□□ -1.74
RNU4-53P-201ENST00000410828 CARMIL1Q5VZK9 1371 aa4.19□□□□□ -1.74
RNU4-53P-201ENST00000410828 BIVM-ERCC5R4GMW8 1640 aa4.19□□□□□ -1.74
RNU4-53P-201ENST00000410828 EPRSP07814 1512 aaKnown RBP4.18□□□□□ -1.74
RNU4-53P-201ENST00000410828 KCNH8Q96L42 1107 aa4.18□□□□□ -1.74
RNU4-53P-201ENST00000410828 KDM5BQ9UGL1 1544 aa4.17□□□□□ -1.74
RNU4-53P-201ENST00000410828 CD109Q6YHK3 1445 aa4.16□□□□□ -1.74
RNU4-53P-201ENST00000410828 FAM9AQ8IZU1 332 aaPredicted RBP4.15□□□□□ -1.75
RNU4-53P-201ENST00000410828 WDR7Q9Y4E6 1490 aa4.15□□□□□ -1.75
RNU4-53P-201ENST00000410828 PPRC1Q5VV67 1664 aaKnown RBP4.15□□□□□ -1.75
RNU4-53P-201ENST00000410828 MAGI3Q5TCQ9 1506 aa4.15□□□□□ -1.75
RNU4-53P-201ENST00000410828 LMTK3Q96Q04 1460 aa4.14□□□□□ -1.75
RNU4-53P-201ENST00000410828 DISP1Q96F81 1524 aa4.14□□□□□ -1.75
RNU4-53P-201ENST00000410828 ARID4BQ4LE39 1312 aaPredicted RBP4.14□□□□□ -1.75
RNU4-53P-201ENST00000410828 IQGAP2Q13576 1575 aa4.14□□□□□ -1.75
RNU4-53P-201ENST00000410828 PHLDB1Q86UU1 1377 aa4.14□□□□□ -1.75
RNU4-53P-201ENST00000410828 MAP3K4Q9Y6R4 1608 aa4.13□□□□□ -1.75
RNU4-53P-201ENST00000410828 CUL7Q14999 1698 aa4.13□□□□□ -1.75
RNU4-53P-201ENST00000410828 PTPRMP28827 1452 aa4.13□□□□□ -1.75
RNU4-53P-201ENST00000410828 CERKQ8TCT0 537 aa4.13□□□□□ -1.75
RNU4-53P-201ENST00000410828 SOCS7O14512 581 aa4.12□□□□□ -1.75
RNU4-53P-201ENST00000410828 RAPGEF3O95398 923 aa4.12□□□□□ -1.75
RNU4-53P-201ENST00000410828 DISP3Q9P2K9 1392 aa4.12□□□□□ -1.75
RNU4-53P-201ENST00000410828 RAPGEF2Q9Y4G8 1499 aa4.11□□□□□ -1.75
RNU4-53P-201ENST00000410828 ARAP3Q8WWN8 1544 aa4.11□□□□□ -1.75
RNU4-53P-201ENST00000410828 UGGT2Q9NYU1 1516 aa4.11□□□□□ -1.75
RNU4-53P-201ENST00000410828 ARID3CA6NKF2 412 aa4.11□□□□□ -1.75
RNU4-53P-201ENST00000410828 HSPA2P54652 639 aa4.11□□□□□ -1.75
RNU4-53P-201ENST00000410828 GOLGA3Q08378 1498 aa4.11□□□□□ -1.75
RNU4-53P-201ENST00000410828 PLPPR3Q6T4P5 718 aa4.1□□□□□ -1.75
RNU4-53P-201ENST00000410828 ILDR2Q71H61 639 aa4.1□□□□□ -1.75
RNU4-53P-201ENST00000410828 PCF11O94913 1555 aaKnown RBP4.1□□□□□ -1.75
RNU4-53P-201ENST00000410828 ZCCHC11Q5TAX3 1644 aaKnown RBP4.1□□□□□ -1.75
RNU4-53P-201ENST00000410828 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.09□□□□□ -1.75
RNU4-53P-201ENST00000410828 HNRNPUL2Q1KMD3 747 aaKnown RBP4.09□□□□□ -1.75
RNU4-53P-201ENST00000410828 DMRT2Q9Y5R5 561 aa4.09□□□□□ -1.75
RNU4-53P-201ENST00000410828 KIAA0556O60303 1618 aa4.09□□□□□ -1.76
RNU4-53P-201ENST00000410828 KIF21BO75037 1637 aa4.08□□□□□ -1.76
RNU4-53P-201ENST00000410828 POGZQ7Z3K3 1410 aa4.08□□□□□ -1.76
RNU4-53P-201ENST00000410828 P3H3Q8IVL6 736 aa4.08□□□□□ -1.76
RNU4-53P-201ENST00000410828 NEO1Q92859 1461 aa4.08□□□□□ -1.76
RNU4-53P-201ENST00000410828 ADAMTSL3P82987 1691 aa4.07□□□□□ -1.76
RNU4-53P-201ENST00000410828 CFAP43Q8NDM7 1665 aa4.07□□□□□ -1.76
RNU4-53P-201ENST00000410828 ATP10BO94823 1461 aa4.07□□□□□ -1.76
RNU4-53P-201ENST00000410828 PLEKHD1A6NEE1 506 aa4.07□□□□□ -1.76
RNU4-53P-201ENST00000410828 ABCA8O94911 1581 aa4.06□□□□□ -1.76
RNU4-53P-201ENST00000410828 DENND4BO75064 1496 aaPredicted RBP4.06□□□□□ -1.76
RNU4-53P-201ENST00000410828 MLECQ14165 292 aa4.06□□□□□ -1.76
RNU4-53P-201ENST00000410828 AKNAQ7Z591 1439 aa4.05□□□□□ -1.76
RNU4-53P-201ENST00000410828 YEATS2Q9ULM3 1422 aa4.05□□□□□ -1.76
RNU4-53P-201ENST00000410828 FHOD3Q2V2M9 1422 aa4.04□□□□□ -1.76
RNU4-53P-201ENST00000410828 MADDQ8WXG6 1647 aa4.04□□□□□ -1.76
RNU4-53P-201ENST00000410828 CEBPAP49715 358 aaPredicted RBP4.04□□□□□ -1.76
RNU4-53P-201ENST00000410828 FANCAO15360 1455 aa4.04□□□□□ -1.76
RNU4-53P-201ENST00000410828 BCORL1Q5H9F3 1711 aa4.04□□□□□ -1.76
RNU4-53P-201ENST00000410828 ABCA9Q8IUA7 1624 aa4.03□□□□□ -1.76
RNU4-53P-201ENST00000410828 MAGI2Q86UL8 1455 aa4.03□□□□□ -1.76
RNU4-53P-201ENST00000410828 PRXQ9BXM0 1461 aa4.03□□□□□ -1.76
RNU4-53P-201ENST00000410828 ARHGEF40Q8TER5 1519 aa4.02□□□□□ -1.77
RNU4-53P-201ENST00000410828 EFCAB2Q5VUJ9 269 aa4.02□□□□□ -1.77
RNU4-53P-201ENST00000410828 ESF1Q9H501 851 aaKnown RBP4.02□□□□□ -1.77
RNU4-53P-201ENST00000410828 UHRF1BP1Q6BDS2 1440 aa4.02□□□□□ -1.77
RNU4-53P-201ENST00000410828 SCAPERQ9BY12 1400 aa4.02□□□□□ -1.77
RNU4-53P-201ENST00000410828 FRMPD1Q5SYB0 1578 aa4.02□□□□□ -1.77
RNU4-53P-201ENST00000410828 ZFYVE16Q7Z3T8 1539 aa4.01□□□□□ -1.77
RNU4-53P-201ENST00000410828 RIMS1Q86UR5 1692 aaKnown RBP4.01□□□□□ -1.77
RNU4-53P-201ENST00000410828 ATP10AO60312 1499 aa4.01□□□□□ -1.77
RNU4-53P-201ENST00000410828 RANGAP1P46060 587 aaPredicted RBP4.01□□□□□ -1.77
RNU4-53P-201ENST00000410828 CSRNP3Q8WYN3 585 aa4.01□□□□□ -1.77
RNU4-53P-201ENST00000410828 MYT1LQ9UL68 1186 aa4.01□□□□□ -1.77
RNU4-53P-201ENST00000410828 PTPRTO14522 1441 aa4.01□□□□□ -1.77
RNU4-53P-201ENST00000410828 EFCAB5A4FU69 1503 aa4□□□□□ -1.77
RNU4-53P-201ENST00000410828 NUP153P49790 1475 aaKnown RBP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms