RNA–Protein interactions for RNA: ENST00000409229.7

SLC3A1-202, Transcript of solute carrier family 3 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC3A1, Length 2,909 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-202ENST00000409229 RSPH6AQ9H0K4 717 aa15.94■□□□□ 0.14
SLC3A1-202ENST00000409229 PPP1R15AO75807 674 aaPredicted RBP15.93■□□□□ 0.14
SLC3A1-202ENST00000409229 WASHC2CQ9Y4E1 1318 aa15.92■□□□□ 0.14
SLC3A1-202ENST00000409229 NPM2Q86SE8 214 aaKnown RBP15.9■□□□□ 0.14
SLC3A1-202ENST00000409229 NACADO15069 1562 aa15.89■□□□□ 0.13
SLC3A1-202ENST00000409229 USP35Q9P2H5 1018 aa15.86■□□□□ 0.13
SLC3A1-202ENST00000409229 RANGAP1P46060 587 aaPredicted RBP15.84■□□□□ 0.13
SLC3A1-202ENST00000409229 SOGA1O94964 1423 aa15.84■□□□□ 0.13
SLC3A1-202ENST00000409229 ABCC8Q09428 1581 aa15.84■□□□□ 0.13
SLC3A1-202ENST00000409229 SIN3AQ96ST3 1273 aa15.83■□□□□ 0.12
SLC3A1-202ENST00000409229 GSE1Q14687 1217 aa15.82■□□□□ 0.12
SLC3A1-202ENST00000409229 CCDC88BA6NC98 1476 aa15.81■□□□□ 0.12
SLC3A1-202ENST00000409229 PPM1GO15355 546 aaPredicted RBP15.76■□□□□ 0.11
SLC3A1-202ENST00000409229 A0A0U1RQG5 324 aaPredicted RBP15.76■□□□□ 0.11
SLC3A1-202ENST00000409229 FRAT1Q92837 279 aaPredicted RBP15.75■□□□□ 0.11
SLC3A1-202ENST00000409229 CLIP1P30622 1438 aa15.73■□□□□ 0.11
SLC3A1-202ENST00000409229 FAM43AQ8N2R8 423 aa15.73■□□□□ 0.11
SLC3A1-202ENST00000409229 EEA1Q15075 1411 aa15.73■□□□□ 0.11
SLC3A1-202ENST00000409229 BAZ1BQ9UIG0 1483 aaKnown RBP15.72■□□□□ 0.11
SLC3A1-202ENST00000409229 RUSC2Q8N2Y8 1516 aa15.72■□□□□ 0.11
SLC3A1-202ENST00000409229 GOLGA3Q08378 1498 aa15.72■□□□□ 0.11
SLC3A1-202ENST00000409229 WDR97A6NE52 1622 aa15.71■□□□□ 0.11
SLC3A1-202ENST00000409229 VPS8Q8N3P4 1428 aa15.69■□□□□ 0.1
SLC3A1-202ENST00000409229 HSP90AA2PQ14568 343 aaPredicted RBP15.68■□□□□ 0.1
SLC3A1-202ENST00000409229 FAM9BQ8IZU0 186 aa15.65■□□□□ 0.1
SLC3A1-202ENST00000409229 NFKBIBQ15653 356 aa15.64■□□□□ 0.09
SLC3A1-202ENST00000409229 DCAF11Q8TEB1 546 aa15.64■□□□□ 0.09
SLC3A1-202ENST00000409229 NAP1L5Q96NT1 182 aaPredicted RBP15.62■□□□□ 0.09
SLC3A1-202ENST00000409229 RBM10P98175 930 aaKnown RBP15.6■□□□□ 0.09
SLC3A1-202ENST00000409229 CCDC184Q52MB2 194 aa15.6■□□□□ 0.09
SLC3A1-202ENST00000409229 KANK4Q5T7N3 995 aaPredicted RBP15.59■□□□□ 0.09
SLC3A1-202ENST00000409229 HSP90AA1P07900 732 aaKnown RBP15.58■□□□□ 0.08
SLC3A1-202ENST00000409229 PDE4CQ08493 712 aa15.57■□□□□ 0.08
SLC3A1-202ENST00000409229 RRAGDQ9NQL2 400 aaPredicted RBP15.57■□□□□ 0.08
SLC3A1-202ENST00000409229 MAPKBP1O60336 1514 aa15.57■□□□□ 0.08
SLC3A1-202ENST00000409229 RAB3GAP2Q9H2M9 1393 aa15.57■□□□□ 0.08
SLC3A1-202ENST00000409229 RRP9O43818 475 aaKnown RBP15.56■□□□□ 0.08
SLC3A1-202ENST00000409229 PDE4AP27815 886 aa15.56■□□□□ 0.08
SLC3A1-202ENST00000409229 SLC4A3P48751 1232 aa15.56■□□□□ 0.08
SLC3A1-202ENST00000409229 SCRIBQ14160 1630 aa15.56■□□□□ 0.08
SLC3A1-202ENST00000409229 AKNAQ7Z591 1439 aa15.54■□□□□ 0.08
SLC3A1-202ENST00000409229 PDIA4P13667 645 aaKnown RBP15.53■□□□□ 0.08
SLC3A1-202ENST00000409229 CECR2Q9BXF3 1484 aa15.52■□□□□ 0.08
SLC3A1-202ENST00000409229 ZBED9Q6R2W3 1325 aa15.52■□□□□ 0.07
SLC3A1-202ENST00000409229 AAMPQ13685 434 aa15.51■□□□□ 0.07
SLC3A1-202ENST00000409229 EIF4G1Q04637 1599 aaKnown RBP15.5■□□□□ 0.07
SLC3A1-202ENST00000409229 MRS2Q9HD23 443 aa15.5■□□□□ 0.07
SLC3A1-202ENST00000409229 MROH2BQ7Z745 1585 aa15.5■□□□□ 0.07
SLC3A1-202ENST00000409229 CEP164Q9UPV0 1460 aa15.5■□□□□ 0.07
SLC3A1-202ENST00000409229 FGD1P98174 961 aa15.49■□□□□ 0.07
SLC3A1-202ENST00000409229 BACH2Q9BYV9 841 aa15.49■□□□□ 0.07
SLC3A1-202ENST00000409229 FRAT2O75474 233 aaPredicted RBP15.48■□□□□ 0.07
SLC3A1-202ENST00000409229 PNNQ9H307 717 aaKnown RBP15.48■□□□□ 0.07
SLC3A1-202ENST00000409229 SENP3-EIF4A1A0A087X0R7 540 aa15.48■□□□□ 0.07
SLC3A1-202ENST00000409229 TCERG1O14776 1098 aaKnown RBP15.48■□□□□ 0.07
SLC3A1-202ENST00000409229 WIZO95785 1651 aa15.48■□□□□ 0.07
SLC3A1-202ENST00000409229 ARID4BQ4LE39 1312 aaPredicted RBP15.47■□□□□ 0.07
SLC3A1-202ENST00000409229 DDRGK1Q96HY6 314 aa15.47■□□□□ 0.07
SLC3A1-202ENST00000409229 CCNB3Q8WWL7 1395 aa15.47■□□□□ 0.07
SLC3A1-202ENST00000409229 CUX2O14529 1486 aa15.46■□□□□ 0.07
SLC3A1-202ENST00000409229 AEBP2Q6ZN18 517 aaPredicted RBP15.44■□□□□ 0.06
SLC3A1-202ENST00000409229 KLHL34Q8N239 644 aa15.44■□□□□ 0.06
SLC3A1-202ENST00000409229 RRBP1Q9P2E9 1410 aaKnown RBP15.44■□□□□ 0.06
SLC3A1-202ENST00000409229 ARXQ96QS3 562 aa15.44■□□□□ 0.06
SLC3A1-202ENST00000409229 KIF21BO75037 1637 aa15.42■□□□□ 0.06
SLC3A1-202ENST00000409229 NCAPD3P42695 1498 aa15.41■□□□□ 0.06
SLC3A1-202ENST00000409229 NUDCQ9Y266 331 aa15.39■□□□□ 0.05
SLC3A1-202ENST00000409229 RGS3P49796 1198 aa15.37■□□□□ 0.05
SLC3A1-202ENST00000409229 CNGB1Q14028 1251 aaPredicted RBP15.37■□□□□ 0.05
SLC3A1-202ENST00000409229 TONSLQ96HA7 1378 aa15.37■□□□□ 0.05
SLC3A1-202ENST00000409229 SETD5Q9C0A6 1442 aa15.37■□□□□ 0.05
SLC3A1-202ENST00000409229 NCBP3Q53F19 620 aaKnown RBP15.37■□□□□ 0.05
SLC3A1-202ENST00000409229 BCL11BQ9C0K0 894 aaPredicted RBP15.36■□□□□ 0.05
SLC3A1-202ENST00000409229 POGKQ9P215 609 aa15.36■□□□□ 0.05
SLC3A1-202ENST00000409229 SKAP1Q86WV1 359 aa15.36■□□□□ 0.05
SLC3A1-202ENST00000409229 SMG6Q86US8 1419 aaKnown RBP15.35■□□□□ 0.05
SLC3A1-202ENST00000409229 MS4A1P11836 297 aa15.35■□□□□ 0.05
SLC3A1-202ENST00000409229 EXOC6Q8TAG9 804 aa15.35■□□□□ 0.05
SLC3A1-202ENST00000409229 PRKRIP1Q9H875 184 aaPredicted RBP15.35■□□□□ 0.05
SLC3A1-202ENST00000409229 RNF123Q5XPI4 1314 aa15.34■□□□□ 0.05
SLC3A1-202ENST00000409229 RAPGEF2Q9Y4G8 1499 aa15.33■□□□□ 0.04
SLC3A1-202ENST00000409229 SMARCA2P51531 1590 aa15.33■□□□□ 0.04
SLC3A1-202ENST00000409229 PEG3Q9GZU2 1588 aa15.33■□□□□ 0.04
SLC3A1-202ENST00000409229 CLCN1P35523 988 aa15.31■□□□□ 0.04
SLC3A1-202ENST00000409229 FAM50AQ14320 339 aaKnown RBP15.3■□□□□ 0.04
SLC3A1-202ENST00000409229 PRDM4Q9UKN5 801 aa15.3■□□□□ 0.04
SLC3A1-202ENST00000409229 L1TD1Q5T7N2 865 aaKnown RBP15.3■□□□□ 0.04
SLC3A1-202ENST00000409229 HSPA5P11021 654 aaKnown RBP15.29■□□□□ 0.04
SLC3A1-202ENST00000409229 CALD1Q05682 793 aaKnown RBP15.27■□□□□ 0.03
SLC3A1-202ENST00000409229 BAZ1AQ9NRL2 1556 aaPredicted RBP15.25■□□□□ 0.03
SLC3A1-202ENST00000409229 PDCL3Q9H2J4 239 aa15.25■□□□□ 0.03
SLC3A1-202ENST00000409229 CNTLNQ9NXG0 1405 aa15.23■□□□□ 0.03
SLC3A1-202ENST00000409229 PANK2Q9BZ23 570 aa15.23■□□□□ 0.03
SLC3A1-202ENST00000409229 RRP1P56182 461 aaKnown RBP15.22■□□□□ 0.03
SLC3A1-202ENST00000409229 XRCC6P12956 609 aaKnown RBP eCLIP15.21■□□□□ 0.03
SLC3A1-202ENST00000409229 ARAP1Q96P48 1450 aa15.2■□□□□ 0.02
SLC3A1-202ENST00000409229 FHAD1B1AJZ9 1412 aa15.18■□□□□ 0.02
SLC3A1-202ENST00000409229 EIF4G2P78344 907 aaKnown RBP eCLIP15.18■□□□□ 0.02
SLC3A1-202ENST00000409229 GOLGA6L3A6NEY3 463 aa15.17■□□□□ 0.02
SLC3A1-202ENST00000409229 TAF7LQ5H9L4 462 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms