RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 EEA1Q15075 1411 aa6.85□□□□□ -1.31
SCN3A-203ENST00000409101 GOLGA3Q08378 1498 aa6.85□□□□□ -1.31
SCN3A-203ENST00000409101 CARMIL2Q6F5E8 1435 aa6.84□□□□□ -1.31
SCN3A-203ENST00000409101 HDGFP51858 240 aaKnown RBP6.84□□□□□ -1.31
SCN3A-203ENST00000409101 DIEXFQ68CQ4 756 aaKnown RBP6.84□□□□□ -1.31
SCN3A-203ENST00000409101 RRP7BPQ9NSQ0 103 aa6.84□□□□□ -1.31
SCN3A-203ENST00000409101 CUX2O14529 1486 aa6.83□□□□□ -1.32
SCN3A-203ENST00000409101 CEP164Q9UPV0 1460 aa6.83□□□□□ -1.32
SCN3A-203ENST00000409101 ACIN1Q9UKV3 1341 aaKnown RBP6.83□□□□□ -1.32
SCN3A-203ENST00000409101 KANK1Q14678 1352 aa6.83□□□□□ -1.32
SCN3A-203ENST00000409101 MYT1Q01538 1121 aa6.82□□□□□ -1.32
SCN3A-203ENST00000409101 LMOD2Q6P5Q4 547 aa6.81□□□□□ -1.32
SCN3A-203ENST00000409101 SOGA1O94964 1423 aa6.81□□□□□ -1.32
SCN3A-203ENST00000409101 CCNB3Q8WWL7 1395 aa6.81□□□□□ -1.32
SCN3A-203ENST00000409101 CARMIL1Q5VZK9 1371 aa6.8□□□□□ -1.32
SCN3A-203ENST00000409101 TMC1Q8TDI8 760 aa6.79□□□□□ -1.32
SCN3A-203ENST00000409101 POGKQ9P215 609 aa6.79□□□□□ -1.32
SCN3A-203ENST00000409101 WDR43Q15061 677 aaKnown RBP eCLIP6.79□□□□□ -1.32
SCN3A-203ENST00000409101 RGL3Q3MIN7 710 aa6.78□□□□□ -1.32
SCN3A-203ENST00000409101 OSCARQ8IYS5 282 aa6.78□□□□□ -1.32
SCN3A-203ENST00000409101 CADPSQ9ULU8 1353 aa6.77□□□□□ -1.33
SCN3A-203ENST00000409101 TDRD9Q8NDG6 1382 aaKnown RBP6.76□□□□□ -1.33
SCN3A-203ENST00000409101 ARXQ96QS3 562 aa6.76□□□□□ -1.33
SCN3A-203ENST00000409101 GGT6Q6P531 493 aa6.75□□□□□ -1.33
SCN3A-203ENST00000409101 NPHP1O15259 732 aa6.75□□□□□ -1.33
SCN3A-203ENST00000409101 CDCA8Q53HL2 280 aa6.75□□□□□ -1.33
SCN3A-203ENST00000409101 CYB5RLQ6IPT4 315 aa6.74□□□□□ -1.33
SCN3A-203ENST00000409101 FHAD1B1AJZ9 1412 aa6.74□□□□□ -1.33
SCN3A-203ENST00000409101 CCDC88BA6NC98 1476 aa6.74□□□□□ -1.33
SCN3A-203ENST00000409101 CEP162Q5TB80 1403 aa6.73□□□□□ -1.33
SCN3A-203ENST00000409101 MROH2BQ7Z745 1585 aa6.73□□□□□ -1.33
SCN3A-203ENST00000409101 EFCAB2Q5VUJ9 269 aa6.73□□□□□ -1.33
SCN3A-203ENST00000409101 CFAP53Q96M91 514 aa6.73□□□□□ -1.33
SCN3A-203ENST00000409101 PPM1GO15355 546 aaPredicted RBP6.72□□□□□ -1.33
SCN3A-203ENST00000409101 MYO15BQ96JP2 1530 aa6.72□□□□□ -1.33
SCN3A-203ENST00000409101 TOP2AP11388 1531 aaKnown RBP6.7□□□□□ -1.34
SCN3A-203ENST00000409101 EID1Q9Y6B2 187 aa6.7□□□□□ -1.34
SCN3A-203ENST00000409101 TNIKQ9UKE5 1360 aa6.7□□□□□ -1.34
SCN3A-203ENST00000409101 FANCD2Q9BXW9 1451 aa6.7□□□□□ -1.34
SCN3A-203ENST00000409101 ATAD2BQ9ULI0 1458 aa6.7□□□□□ -1.34
SCN3A-203ENST00000409101 FAM9BQ8IZU0 186 aa6.7□□□□□ -1.34
SCN3A-203ENST00000409101 SALL2Q9Y467 1007 aaPredicted RBP6.7□□□□□ -1.34
SCN3A-203ENST00000409101 ABCC8Q09428 1581 aa6.7□□□□□ -1.34
SCN3A-203ENST00000409101 RTL5Q5HYW3 569 aaPredicted RBP6.69□□□□□ -1.34
SCN3A-203ENST00000409101 MYH16Q9H6N6 1097 aa6.69□□□□□ -1.34
SCN3A-203ENST00000409101 EIF4G2P78344 907 aaKnown RBP eCLIP6.69□□□□□ -1.34
SCN3A-203ENST00000409101 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.69□□□□□ -1.34
SCN3A-203ENST00000409101 CARD11Q9BXL7 1154 aa6.68□□□□□ -1.34
SCN3A-203ENST00000409101 CCDC9Q9Y3X0 531 aaKnown RBP6.68□□□□□ -1.34
SCN3A-203ENST00000409101 KNSTRNQ9Y448 316 aa6.68□□□□□ -1.34
SCN3A-203ENST00000409101 JPH4Q96JJ6 628 aa6.67□□□□□ -1.34
SCN3A-203ENST00000409101 DDX10Q13206 875 aaKnown RBP6.67□□□□□ -1.34
SCN3A-203ENST00000409101 SRPK2P78362 688 aaKnown RBP6.66□□□□□ -1.34
SCN3A-203ENST00000409101 NUDCQ9Y266 331 aa6.66□□□□□ -1.34
SCN3A-203ENST00000409101 PAK3O75914 559 aaPredicted RBP6.66□□□□□ -1.34
SCN3A-203ENST00000409101 FMN1Q68DA7 1419 aa6.65□□□□□ -1.34
SCN3A-203ENST00000409101 SMARCA4P51532 1647 aa6.65□□□□□ -1.34
SCN3A-203ENST00000409101 MAPK8IP3Q9UPT6 1336 aa6.65□□□□□ -1.34
SCN3A-203ENST00000409101 CSB-PGBD3P0DP91 1061 aa6.65□□□□□ -1.34
SCN3A-203ENST00000409101 STK26Q9P289 416 aa6.65□□□□□ -1.34
SCN3A-203ENST00000409101 FAM69CQ0P6D2 419 aa6.65□□□□□ -1.35
SCN3A-203ENST00000409101 ARHGAP35Q9NRY4 1499 aa6.64□□□□□ -1.35
SCN3A-203ENST00000409101 PTPRGP23470 1445 aa6.64□□□□□ -1.35
SCN3A-203ENST00000409101 SPAG9O60271 1321 aaKnown RBP6.64□□□□□ -1.35
SCN3A-203ENST00000409101 WASHC2CQ9Y4E1 1318 aa6.64□□□□□ -1.35
SCN3A-203ENST00000409101 WIZO95785 1651 aa6.64□□□□□ -1.35
SCN3A-203ENST00000409101 KIF3BO15066 747 aa6.64□□□□□ -1.35
SCN3A-203ENST00000409101 SOX12O15370 315 aa6.64□□□□□ -1.35
SCN3A-203ENST00000409101 SAFB2Q14151 953 aaKnown RBP eCLIP6.64□□□□□ -1.35
SCN3A-203ENST00000409101 HNRNPUQ00839 825 aaKnown RBP eCLIP6.64□□□□□ -1.35
SCN3A-203ENST00000409101 MRS2Q9HD23 443 aa6.64□□□□□ -1.35
SCN3A-203ENST00000409101 RAPGEF2Q9Y4G8 1499 aa6.63□□□□□ -1.35
SCN3A-203ENST00000409101 MEX3CQ5U5Q3 659 aaKnown RBP6.63□□□□□ -1.35
SCN3A-203ENST00000409101 UPF2Q9HAU5 1272 aaKnown RBP6.63□□□□□ -1.35
SCN3A-203ENST00000409101 HSP90AA1P07900 732 aaKnown RBP6.63□□□□□ -1.35
SCN3A-203ENST00000409101 PNNQ9H307 717 aaKnown RBP6.63□□□□□ -1.35
SCN3A-203ENST00000409101 DCAF11Q8TEB1 546 aa6.62□□□□□ -1.35
SCN3A-203ENST00000409101 LAS1LQ9Y4W2 734 aaKnown RBP6.62□□□□□ -1.35
SCN3A-203ENST00000409101 HDGFL2Q7Z4V5 671 aaPredicted RBP6.62□□□□□ -1.35
SCN3A-203ENST00000409101 ANKRD30AQ9BXX3 1397 aa6.62□□□□□ -1.35
SCN3A-203ENST00000409101 HNRNPMP52272 730 aaKnown RBP eCLIP6.62□□□□□ -1.35
SCN3A-203ENST00000409101 TNNT2P45379 298 aaPredicted RBP6.61□□□□□ -1.35
SCN3A-203ENST00000409101 TMF1P82094 1093 aa6.61□□□□□ -1.35
SCN3A-203ENST00000409101 RSPH4AQ5TD94 716 aa6.61□□□□□ -1.35
SCN3A-203ENST00000409101 CCDC18Q5T9S5 1454 aa6.6□□□□□ -1.35
SCN3A-203ENST00000409101 HIRIP3Q9BW71 556 aaPredicted RBP6.6□□□□□ -1.35
SCN3A-203ENST00000409101 TMX4Q9H1E5 349 aaPredicted RBP6.6□□□□□ -1.35
SCN3A-203ENST00000409101 U2SURPO15042 1029 aaKnown RBP6.6□□□□□ -1.35
SCN3A-203ENST00000409101 GOLGA2Q08379 1002 aa6.59□□□□□ -1.35
SCN3A-203ENST00000409101 PKD2Q13563 968 aa6.59□□□□□ -1.36
SCN3A-203ENST00000409101 GAPVD1Q14C86 1478 aa6.58□□□□□ -1.36
SCN3A-203ENST00000409101 MRC2Q9UBG0 1479 aa6.58□□□□□ -1.36
SCN3A-203ENST00000409101 FHOD3Q2V2M9 1422 aa6.58□□□□□ -1.36
SCN3A-203ENST00000409101 NUP155O75694 1391 aa6.58□□□□□ -1.36
SCN3A-203ENST00000409101 NUTM2DQ5VT03 806 aaPredicted RBP6.57□□□□□ -1.36
SCN3A-203ENST00000409101 RTF1Q92541 710 aaKnown RBP6.57□□□□□ -1.36
SCN3A-203ENST00000409101 NGDNQ8NEJ9 315 aaKnown RBP6.57□□□□□ -1.36
SCN3A-203ENST00000409101 ANP32AP39687 249 aaKnown RBP6.57□□□□□ -1.36
SCN3A-203ENST00000409101 CC2D1BQ5T0F9 858 aaKnown RBP6.57□□□□□ -1.36
SCN3A-203ENST00000409101 MORC1Q86VD1 984 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms