RNA–Protein interactions for RNA: ENST00000409047.2

TUBA3D-202, Transcript of tubulin alpha 3d, humanhuman

TSL 2

Gene TUBA3D, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-202ENST00000409047 JPH4Q96JJ6 628 aa23.58■■□□□ 1.37
TUBA3D-202ENST00000409047 ABCC10Q5T3U5 1492 aa23.48■■□□□ 1.35
TUBA3D-202ENST00000409047 ADCY10Q96PN6 1610 aa23.47■■□□□ 1.35
TUBA3D-202ENST00000409047 MAPKBP1O60336 1514 aa23.46■■□□□ 1.35
TUBA3D-202ENST00000409047 DIP2BQ9P265 1576 aa23.43■■□□□ 1.34
TUBA3D-202ENST00000409047 FAM69CQ0P6D2 419 aa23.4■■□□□ 1.34
TUBA3D-202ENST00000409047 IGF1RP08069 1367 aa23.4■■□□□ 1.34
TUBA3D-202ENST00000409047 KIAA0586Q9BVV6 1533 aa23.39■■□□□ 1.34
TUBA3D-202ENST00000409047 CUL7Q14999 1698 aa23.33■■□□□ 1.33
TUBA3D-202ENST00000409047 NPM1P06748 294 aaKnown RBP eCLIP23.31■■□□□ 1.32
TUBA3D-202ENST00000409047 KIF27Q86VH2 1401 aa23.29■■□□□ 1.32
TUBA3D-202ENST00000409047 TSPOAP1O95153 1857 aa23.26■■□□□ 1.31
TUBA3D-202ENST00000409047 KDM6BO15054 1643 aa23.25■■□□□ 1.31
TUBA3D-202ENST00000409047 KDM4FA0A1W2PPD8 638 aa23.21■■□□□ 1.31
TUBA3D-202ENST00000409047 PTPRGP23470 1445 aa23.19■■□□□ 1.3
TUBA3D-202ENST00000409047 CARMIL1Q5VZK9 1371 aa23.19■■□□□ 1.3
TUBA3D-202ENST00000409047 PPRC1Q5VV67 1664 aaKnown RBP23.16■■□□□ 1.3
TUBA3D-202ENST00000409047 ABCC2Q92887 1545 aa23.15■■□□□ 1.3
TUBA3D-202ENST00000409047 TNIKQ9UKE5 1360 aa23.14■■□□□ 1.29
TUBA3D-202ENST00000409047 IQGAP2Q13576 1575 aa23.12■■□□□ 1.29
TUBA3D-202ENST00000409047 GLI2P10070 1586 aa23.1■■□□□ 1.29
TUBA3D-202ENST00000409047 ASXL2Q76L83 1435 aa23.1■■□□□ 1.29
TUBA3D-202ENST00000409047 UHRF1BP1LA0JNW5 1464 aa23.1■■□□□ 1.29
TUBA3D-202ENST00000409047 DISP1Q96F81 1524 aa23.09■■□□□ 1.29
TUBA3D-202ENST00000409047 CARMIL2Q6F5E8 1435 aa23.08■■□□□ 1.29
TUBA3D-202ENST00000409047 TTBK1Q5TCY1 1321 aaPredicted RBP23.07■■□□□ 1.28
TUBA3D-202ENST00000409047 PLB1Q6P1J6 1458 aa23.05■■□□□ 1.28
TUBA3D-202ENST00000409047 UACAQ9BZF9 1416 aa23.03■■□□□ 1.28
TUBA3D-202ENST00000409047 COL17A1Q9UMD9 1497 aaPredicted RBP23.01■■□□□ 1.27
TUBA3D-202ENST00000409047 KDM5BQ9UGL1 1544 aa23.01■■□□□ 1.27
TUBA3D-202ENST00000409047 UGGT2Q9NYU1 1516 aa23■■□□□ 1.27
TUBA3D-202ENST00000409047 MAP3K4Q9Y6R4 1608 aa22.98■■□□□ 1.27
TUBA3D-202ENST00000409047 EPRSP07814 1512 aaKnown RBP22.98■■□□□ 1.27
TUBA3D-202ENST00000409047 ZCCHC11Q5TAX3 1644 aaKnown RBP22.95■■□□□ 1.26
TUBA3D-202ENST00000409047 KIAA0556O60303 1618 aa22.94■■□□□ 1.26
TUBA3D-202ENST00000409047 RAPGEF2Q9Y4G8 1499 aa22.94■■□□□ 1.26
TUBA3D-202ENST00000409047 ADGRL1O94910 1474 aa22.92■■□□□ 1.26
TUBA3D-202ENST00000409047 TEX14Q8IWB6 1497 aa22.83■■□□□ 1.25
TUBA3D-202ENST00000409047 WDR7Q9Y4E6 1490 aa22.82■■□□□ 1.24
TUBA3D-202ENST00000409047 CTTNBP2Q8WZ74 1663 aa22.81■■□□□ 1.24
TUBA3D-202ENST00000409047 ABCA8O94911 1581 aa22.77■■□□□ 1.24
TUBA3D-202ENST00000409047 ILDR1Q86SU0 546 aaPredicted RBP22.75■■□□□ 1.23
TUBA3D-202ENST00000409047 MAGI3Q5TCQ9 1506 aa22.73■■□□□ 1.23
TUBA3D-202ENST00000409047 CFAP43Q8NDM7 1665 aa22.72■■□□□ 1.23
TUBA3D-202ENST00000409047 HECW2Q9P2P5 1572 aa22.71■■□□□ 1.23
TUBA3D-202ENST00000409047 PRXQ9BXM0 1461 aa22.69■■□□□ 1.22
TUBA3D-202ENST00000409047 CD109Q6YHK3 1445 aa22.69■■□□□ 1.22
TUBA3D-202ENST00000409047 GOLGA3Q08378 1498 aa22.68■■□□□ 1.22
TUBA3D-202ENST00000409047 KCNH8Q96L42 1107 aa22.62■■□□□ 1.21
TUBA3D-202ENST00000409047 KIF21BO75037 1637 aa22.58■■□□□ 1.21
TUBA3D-202ENST00000409047 ATP10BO94823 1461 aa22.57■■□□□ 1.2
TUBA3D-202ENST00000409047 ARAP3Q8WWN8 1544 aa22.57■■□□□ 1.2
TUBA3D-202ENST00000409047 ABCA9Q8IUA7 1624 aa22.52■■□□□ 1.2
TUBA3D-202ENST00000409047 SAMD9Q5K651 1589 aa22.5■■□□□ 1.19
TUBA3D-202ENST00000409047 ARID3CA6NKF2 412 aa22.49■■□□□ 1.19
TUBA3D-202ENST00000409047 P3H3Q8IVL6 736 aa22.48■■□□□ 1.19
TUBA3D-202ENST00000409047 ADAMTSL3P82987 1691 aa22.46■■□□□ 1.19
TUBA3D-202ENST00000409047 RAPGEF6Q8TEU7 1601 aa22.43■■□□□ 1.18
TUBA3D-202ENST00000409047 FRMPD1Q5SYB0 1578 aa22.42■■□□□ 1.18
TUBA3D-202ENST00000409047 PHLDB1Q86UU1 1377 aa22.41■■□□□ 1.18
TUBA3D-202ENST00000409047 RAPGEF3O95398 923 aa22.39■■□□□ 1.17
TUBA3D-202ENST00000409047 NEO1Q92859 1461 aa22.39■■□□□ 1.17
TUBA3D-202ENST00000409047 PTPRMP28827 1452 aa22.38■■□□□ 1.17
TUBA3D-202ENST00000409047 NUP153P49790 1475 aaKnown RBP22.38■■□□□ 1.17
TUBA3D-202ENST00000409047 BCORL1Q5H9F3 1711 aa22.35■■□□□ 1.17
TUBA3D-202ENST00000409047 CSRNP3Q8WYN3 585 aa22.35■■□□□ 1.17
TUBA3D-202ENST00000409047 MADDQ8WXG6 1647 aa22.31■■□□□ 1.16
TUBA3D-202ENST00000409047 FHOD3Q2V2M9 1422 aa22.29■■□□□ 1.16
TUBA3D-202ENST00000409047 RICTORQ6R327 1708 aa22.28■■□□□ 1.16
TUBA3D-202ENST00000409047 FAM9AQ8IZU1 332 aaPredicted RBP22.28■■□□□ 1.16
TUBA3D-202ENST00000409047 ARHGEF40Q8TER5 1519 aa22.26■■□□□ 1.15
TUBA3D-202ENST00000409047 LMTK3Q96Q04 1460 aa22.24■■□□□ 1.15
TUBA3D-202ENST00000409047 SIGLEC1Q9BZZ2 1709 aa22.23■■□□□ 1.15
TUBA3D-202ENST00000409047 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.23■■□□□ 1.15
TUBA3D-202ENST00000409047 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.23■■□□□ 1.15
TUBA3D-202ENST00000409047 HNRNPUL2Q1KMD3 747 aaKnown RBP22.23■■□□□ 1.15
TUBA3D-202ENST00000409047 PCF11O94913 1555 aaKnown RBP22.23■■□□□ 1.15
TUBA3D-202ENST00000409047 FBXO41Q8TF61 875 aa22.22■■□□□ 1.15
TUBA3D-202ENST00000409047 AKNAQ7Z591 1439 aa22.21■■□□□ 1.15
TUBA3D-202ENST00000409047 DENND4BO75064 1496 aaPredicted RBP22.21■■□□□ 1.15
TUBA3D-202ENST00000409047 TTC37Q6PGP7 1564 aa22.21■■□□□ 1.15
TUBA3D-202ENST00000409047 RIMS1Q86UR5 1692 aaKnown RBP22.2■■□□□ 1.14
TUBA3D-202ENST00000409047 EEA1Q15075 1411 aa22.19■■□□□ 1.14
TUBA3D-202ENST00000409047 ZMYM4Q5VZL5 1548 aa22.18■■□□□ 1.14
TUBA3D-202ENST00000409047 FANCAO15360 1455 aa22.18■■□□□ 1.14
TUBA3D-202ENST00000409047 RANGAP1P46060 587 aaPredicted RBP22.18■■□□□ 1.14
TUBA3D-202ENST00000409047 ARID4BQ4LE39 1312 aaPredicted RBP22.16■■□□□ 1.14
TUBA3D-202ENST00000409047 PLEKHD1A6NEE1 506 aa22.16■■□□□ 1.14
TUBA3D-202ENST00000409047 CFAP74Q9C0B2 1584 aa22.16■■□□□ 1.14
TUBA3D-202ENST00000409047 YEATS2Q9ULM3 1422 aa22.14■■□□□ 1.14
TUBA3D-202ENST00000409047 EFCAB5A4FU69 1503 aa22.14■■□□□ 1.13
TUBA3D-202ENST00000409047 CDK13Q14004 1512 aaKnown RBP22.11■■□□□ 1.13
TUBA3D-202ENST00000409047 ZFYVE16Q7Z3T8 1539 aa22.1■■□□□ 1.13
TUBA3D-202ENST00000409047 HECW1Q76N89 1606 aa22.09■■□□□ 1.13
TUBA3D-202ENST00000409047 MAGI2Q86UL8 1455 aa22.07■■□□□ 1.12
TUBA3D-202ENST00000409047 PLCH2O75038 1416 aa22.06■■□□□ 1.12
TUBA3D-202ENST00000409047 HSPA2P54652 639 aa22.05■■□□□ 1.12
TUBA3D-202ENST00000409047 POGZQ7Z3K3 1410 aa22.05■■□□□ 1.12
TUBA3D-202ENST00000409047 FER1L4A9Z1Z3 1794 aa22.02■■□□□ 1.12
TUBA3D-202ENST00000409047 SCAPERQ9BY12 1400 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms