RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 TSPY10P0CW01 314 aa17■□□□□ 0.31
RNF43-201ENST00000407977 MTUS2Q5JR59 1369 aa17■□□□□ 0.31
RNF43-201ENST00000407977 NOP58Q9Y2X3 529 aaKnown RBP16.99■□□□□ 0.31
RNF43-201ENST00000407977 ESF1Q9H501 851 aaKnown RBP16.99■□□□□ 0.31
RNF43-201ENST00000407977 CHIC2Q9UKJ5 165 aa16.99■□□□□ 0.31
RNF43-201ENST00000407977 STAG3Q9UJ98 1225 aa16.99■□□□□ 0.31
RNF43-201ENST00000407977 SUPT16HQ9Y5B9 1047 aaKnown RBP16.97■□□□□ 0.31
RNF43-201ENST00000407977 PTMAP06454 111 aaKnown RBP16.96■□□□□ 0.31
RNF43-201ENST00000407977 CDK11BP21127 795 aaKnown RBP16.94■□□□□ 0.3
RNF43-201ENST00000407977 KDM2AQ9Y2K7 1162 aa16.92■□□□□ 0.3
RNF43-201ENST00000407977 ZCCHC6Q5VYS8 1495 aaKnown RBP16.92■□□□□ 0.3
RNF43-201ENST00000407977 NAP1L5Q96NT1 182 aaPredicted RBP16.92■□□□□ 0.3
RNF43-201ENST00000407977 CDCA8Q53HL2 280 aa16.91■□□□□ 0.3
RNF43-201ENST00000407977 CASC1Q6TDU7 716 aa16.9■□□□□ 0.3
RNF43-201ENST00000407977 HIRIP3Q9BW71 556 aaPredicted RBP16.9■□□□□ 0.3
RNF43-201ENST00000407977 DNTTIP2Q5QJE6 756 aaKnown RBP16.9■□□□□ 0.3
RNF43-201ENST00000407977 RSF1Q96T23 1441 aaPredicted RBP16.89■□□□□ 0.29
RNF43-201ENST00000407977 GOLGA3Q08378 1498 aa16.88■□□□□ 0.29
RNF43-201ENST00000407977 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.88■□□□□ 0.296e-9■■□□□ 14.4
RNF43-201ENST00000407977 ZRSR1Q15695 479 aaKnown RBP16.87■□□□□ 0.29
RNF43-201ENST00000407977 CFAP53Q96M91 514 aa16.87■□□□□ 0.29
RNF43-201ENST00000407977 CEP162Q5TB80 1403 aa16.87■□□□□ 0.29
RNF43-201ENST00000407977 CHMP4BQ9H444 224 aaKnown RBP16.84■□□□□ 0.29
RNF43-201ENST00000407977 SCRIBQ14160 1630 aa16.84■□□□□ 0.29
RNF43-201ENST00000407977 L1TD1Q5T7N2 865 aaKnown RBP16.84■□□□□ 0.29
RNF43-201ENST00000407977 LAS1LQ9Y4W2 734 aaKnown RBP16.83■□□□□ 0.28
RNF43-201ENST00000407977 MS4A1P11836 297 aa16.81■□□□□ 0.28
RNF43-201ENST00000407977 TIMELESSQ9UNS1 1208 aa16.81■□□□□ 0.28
RNF43-201ENST00000407977 KNSTRNQ9Y448 316 aa16.81■□□□□ 0.28
RNF43-201ENST00000407977 FTSJ3Q8IY81 847 aaKnown RBP16.8■□□□□ 0.28
RNF43-201ENST00000407977 NPM1P06748 294 aaKnown RBP eCLIP16.8■□□□□ 0.28
RNF43-201ENST00000407977 CCER2I3L3R5 266 aa16.79■□□□□ 0.28
RNF43-201ENST00000407977 DEKP35659 375 aaKnown RBP16.78■□□□□ 0.28
RNF43-201ENST00000407977 TNIKQ9UKE5 1360 aa16.78■□□□□ 0.28
RNF43-201ENST00000407977 RRP7BPQ9NSQ0 103 aa16.78■□□□□ 0.28
RNF43-201ENST00000407977 RTN4Q9NQC3 1192 aaKnown RBP16.77■□□□□ 0.28
RNF43-201ENST00000407977 MYO15BQ96JP2 1530 aa16.77■□□□□ 0.27
RNF43-201ENST00000407977 GOLGA6L6A8MZA4 724 aa16.76■□□□□ 0.27
RNF43-201ENST00000407977 NRDCO43847 1150 aa16.75■□□□□ 0.27
RNF43-201ENST00000407977 RBM19Q9Y4C8 960 aaKnown RBP16.74■□□□□ 0.27
RNF43-201ENST00000407977 HSP90AB1P08238 724 aaKnown RBP16.72■□□□□ 0.27
RNF43-201ENST00000407977 RGS3P49796 1198 aa16.72■□□□□ 0.27
RNF43-201ENST00000407977 CHAF1AQ13111 956 aaPredicted RBP16.72■□□□□ 0.27
RNF43-201ENST00000407977 CARD11Q9BXL7 1154 aa16.72■□□□□ 0.27
RNF43-201ENST00000407977 CFAP44Q96MT7 982 aa16.71■□□□□ 0.27
RNF43-201ENST00000407977 B4GALNT3Q6L9W6 998 aa16.7■□□□□ 0.26
RNF43-201ENST00000407977 MSNP26038 577 aaKnown RBP16.7■□□□□ 0.26
RNF43-201ENST00000407977 NUDCQ9Y266 331 aa16.69■□□□□ 0.26
RNF43-201ENST00000407977 HSCBQ8IWL3 235 aa16.69■□□□□ 0.26
RNF43-201ENST00000407977 PTMSP20962 102 aa16.68■□□□□ 0.26
RNF43-201ENST00000407977 CEP164Q9UPV0 1460 aa16.68■□□□□ 0.26
RNF43-201ENST00000407977 MAPK8IP3Q9UPT6 1336 aa16.67■□□□□ 0.26
RNF43-201ENST00000407977 PLCB2Q00722 1185 aa16.63■□□□□ 0.25
RNF43-201ENST00000407977 PNNQ9H307 717 aaKnown RBP16.63■□□□□ 0.25
RNF43-201ENST00000407977 PLEKHD1A6NEE1 506 aa16.62■□□□□ 0.25
RNF43-201ENST00000407977 FRAT1Q92837 279 aaPredicted RBP16.61■□□□□ 0.25
RNF43-201ENST00000407977 RGL3Q3MIN7 710 aa16.61■□□□□ 0.25
RNF43-201ENST00000407977 TCERG1O14776 1098 aaKnown RBP16.6■□□□□ 0.25
RNF43-201ENST00000407977 WRNQ14191 1432 aaPredicted RBP eCLIP16.58■□□□□ 0.24
RNF43-201ENST00000407977 SIN3AQ96ST3 1273 aa16.58■□□□□ 0.24
RNF43-201ENST00000407977 GOLGA6L4A6NEF3 574 aa16.57■□□□□ 0.24
RNF43-201ENST00000407977 CFDP1Q9UEE9 299 aaPredicted RBP16.57■□□□□ 0.24
RNF43-201ENST00000407977 CCNB3Q8WWL7 1395 aa16.57■□□□□ 0.24
RNF43-201ENST00000407977 GBP4Q96PP9 640 aa16.56■□□□□ 0.24
RNF43-201ENST00000407977 KIF27Q86VH2 1401 aa16.56■□□□□ 0.24
RNF43-201ENST00000407977 NEUROD2Q15784 382 aa16.56■□□□□ 0.24
RNF43-201ENST00000407977 MCCP23508 829 aa16.56■□□□□ 0.24
RNF43-201ENST00000407977 CHMP7Q8WUX9 453 aaPredicted RBP16.55■□□□□ 0.24
RNF43-201ENST00000407977 PPP1R15AO75807 674 aaPredicted RBP16.55■□□□□ 0.24
RNF43-201ENST00000407977 HAP1P54257 671 aaPredicted RBP16.53■□□□□ 0.24
RNF43-201ENST00000407977 TMF1P82094 1093 aa16.53■□□□□ 0.24
RNF43-201ENST00000407977 FGD1P98174 961 aa16.51■□□□□ 0.23
RNF43-201ENST00000407977 SENP3-EIF4A1A0A087X0R7 540 aa16.51■□□□□ 0.23
RNF43-201ENST00000407977 TSHZ2Q9NRE2 1034 aa16.51■□□□□ 0.23
RNF43-201ENST00000407977 KIAA2012Q0VF49 1180 aa16.51■□□□□ 0.23
RNF43-201ENST00000407977 TPRNQ4KMQ1 711 aa16.5■□□□□ 0.23
RNF43-201ENST00000407977 FHAD1B1AJZ9 1412 aa16.5■□□□□ 0.23
RNF43-201ENST00000407977 KCNJ4P48050 445 aa16.49■□□□□ 0.23
RNF43-201ENST00000407977 IPO9Q96P70 1041 aaKnown RBP16.49■□□□□ 0.23
RNF43-201ENST00000407977 CC2D1BQ5T0F9 858 aaKnown RBP16.48■□□□□ 0.23
RNF43-201ENST00000407977 ARID4BQ4LE39 1312 aaPredicted RBP16.47■□□□□ 0.23
RNF43-201ENST00000407977 USP35Q9P2H5 1018 aa16.47■□□□□ 0.23
RNF43-201ENST00000407977 OS9Q13438 667 aaPredicted RBP16.45■□□□□ 0.22
RNF43-201ENST00000407977 SYAP1Q96A49 352 aaPredicted RBP16.45■□□□□ 0.22
RNF43-201ENST00000407977 C14orf37Q86TY3 774 aa16.45■□□□□ 0.22
RNF43-201ENST00000407977 DRC7Q8IY82 874 aa16.45■□□□□ 0.22
RNF43-201ENST00000407977 RCAN3Q9UKA8 241 aa16.45■□□□□ 0.22
RNF43-201ENST00000407977 IPO8O15397 1037 aaKnown RBP16.45■□□□□ 0.22
RNF43-201ENST00000407977 SETD5Q9C0A6 1442 aa16.45■□□□□ 0.22
RNF43-201ENST00000407977 GOLGA6L3A6NEY3 463 aa16.44■□□□□ 0.22
RNF43-201ENST00000407977 RWDD1Q9H446 243 aaPredicted RBP16.44■□□□□ 0.22
RNF43-201ENST00000407977 KTN1Q86UP2 1357 aaKnown RBP16.43■□□□□ 0.22
RNF43-201ENST00000407977 RALBP1Q15311 655 aa16.43■□□□□ 0.22
RNF43-201ENST00000407977 U2SURPO15042 1029 aaKnown RBP16.41■□□□□ 0.22
RNF43-201ENST00000407977 HSPA5P11021 654 aaKnown RBP16.41■□□□□ 0.22
RNF43-201ENST00000407977 ZBTB7CA1YPR0 619 aa16.41■□□□□ 0.22
RNF43-201ENST00000407977 PLPPR3Q6T4P5 718 aa16.4■□□□□ 0.22
RNF43-201ENST00000407977 HTATSF1O43719 755 aaKnown RBP16.4■□□□□ 0.22
RNF43-201ENST00000407977 POGKQ9P215 609 aa16.39■□□□□ 0.21
RNF43-201ENST00000407977 PMFBP1Q8TBY8 1022 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms