RNA–Protein interactions for RNA: ENST00000406961.5

NCOA1-205, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene NCOA1, Length 7,289 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-205ENST00000406961 SALL2Q9Y467 1007 aaPredicted RBP21.65■■□□□ 1.06
NCOA1-205ENST00000406961 MROH2BQ7Z745 1585 aa21.63■■□□□ 1.05
NCOA1-205ENST00000406961 EIF4G2P78344 907 aaKnown RBP eCLIP21.63■■□□□ 1.051e-6■■■□□ 18
NCOA1-205ENST00000406961 MIER1Q8N108 512 aa21.62■■□□□ 1.05
NCOA1-205ENST00000406961 MRS2Q9HD23 443 aa21.62■■□□□ 1.05
NCOA1-205ENST00000406961 ANP32AP39687 249 aaKnown RBP21.62■■□□□ 1.05
NCOA1-205ENST00000406961 CFDP1Q9UEE9 299 aaPredicted RBP21.61■■□□□ 1.05
NCOA1-205ENST00000406961 SOGA1O94964 1423 aa21.61■■□□□ 1.05
NCOA1-205ENST00000406961 ERCC6Q03468 1493 aa21.61■■□□□ 1.05
NCOA1-205ENST00000406961 NPM2Q86SE8 214 aaKnown RBP21.57■■□□□ 1.04
NCOA1-205ENST00000406961 CCDC88BA6NC98 1476 aa21.57■■□□□ 1.04
NCOA1-205ENST00000406961 WDR43Q15061 677 aaKnown RBP eCLIP21.56■■□□□ 1.04
NCOA1-205ENST00000406961 CUX2O14529 1486 aa21.55■■□□□ 1.04
NCOA1-205ENST00000406961 CARMIL1Q5VZK9 1371 aa21.54■■□□□ 1.04
NCOA1-205ENST00000406961 RGL3Q3MIN7 710 aa21.48■■□□□ 1.03
NCOA1-205ENST00000406961 FHAD1B1AJZ9 1412 aa21.47■■□□□ 1.03
NCOA1-205ENST00000406961 EIF4G1Q04637 1599 aaKnown RBP21.45■■□□□ 1.02
NCOA1-205ENST00000406961 SMARCA2P51531 1590 aa21.45■■□□□ 1.02
NCOA1-205ENST00000406961 ABCC8Q09428 1581 aa21.45■■□□□ 1.02
NCOA1-205ENST00000406961 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.44■■□□□ 1.02
NCOA1-205ENST00000406961 SENP3Q9H4L4 574 aaPredicted RBP21.43■■□□□ 1.02
NCOA1-205ENST00000406961 CCDC136Q96JN2 1154 aa21.43■■□□□ 1.02
NCOA1-205ENST00000406961 CCNB3Q8WWL7 1395 aa21.4■■□□□ 1.02
NCOA1-205ENST00000406961 PPP1R15AO75807 674 aaPredicted RBP21.4■■□□□ 1.02
NCOA1-205ENST00000406961 SIN3AQ96ST3 1273 aa21.4■■□□□ 1.02
NCOA1-205ENST00000406961 CARD11Q9BXL7 1154 aa21.35■■□□□ 1.01
NCOA1-205ENST00000406961 UPF2Q9HAU5 1272 aaKnown RBP21.34■■□□□ 1.01
NCOA1-205ENST00000406961 IRX6P78412 446 aaPredicted RBP21.34■■□□□ 1.01
NCOA1-205ENST00000406961 TOP2AP11388 1531 aaKnown RBP21.34■■□□□ 1.01
NCOA1-205ENST00000406961 VPS8Q8N3P4 1428 aa21.32■■□□□ 1
NCOA1-205ENST00000406961 WIZO95785 1651 aa21.29■■□□□ 1
NCOA1-205ENST00000406961 PDS5BQ9NTI5 1447 aa21.28■■□□□ 1
NCOA1-205ENST00000406961 CDCA8Q53HL2 280 aa21.28■■□□□ 1
NCOA1-205ENST00000406961 SCAF1Q9H7N4 1312 aaKnown RBP21.28■■□□□ 1
NCOA1-205ENST00000406961 HSP90AA1P07900 732 aaKnown RBP21.27■■□□□ 1
NCOA1-205ENST00000406961 ARID4BQ4LE39 1312 aaPredicted RBP21.25■□□□□ 0.99
NCOA1-205ENST00000406961 KNSTRNQ9Y448 316 aa21.25■□□□□ 0.99
NCOA1-205ENST00000406961 KANK4Q5T7N3 995 aaPredicted RBP21.24■□□□□ 0.99
NCOA1-205ENST00000406961 ARHGAP35Q9NRY4 1499 aa21.22■□□□□ 0.99
NCOA1-205ENST00000406961 TDRD9Q8NDG6 1382 aaKnown RBP21.22■□□□□ 0.99
NCOA1-205ENST00000406961 ZBTB7CA1YPR0 619 aa21.19■□□□□ 0.98
NCOA1-205ENST00000406961 C14orf37Q86TY3 774 aa21.19■□□□□ 0.98
NCOA1-205ENST00000406961 CFAP53Q96M91 514 aa21.19■□□□□ 0.98
NCOA1-205ENST00000406961 SETD5Q9C0A6 1442 aa21.19■□□□□ 0.98
NCOA1-205ENST00000406961 SENP3-EIF4A1A0A087X0R7 540 aa21.17■□□□□ 0.98
NCOA1-205ENST00000406961 CADPSQ9ULU8 1353 aa21.15■□□□□ 0.98
NCOA1-205ENST00000406961 PLEKHG5O94827 1062 aa21.14■□□□□ 0.97
NCOA1-205ENST00000406961 CARMIL2Q6F5E8 1435 aa21.13■□□□□ 0.97
NCOA1-205ENST00000406961 TIMELESSQ9UNS1 1208 aa21.13■□□□□ 0.97
NCOA1-205ENST00000406961 MYH16Q9H6N6 1097 aa21.12■□□□□ 0.97
NCOA1-205ENST00000406961 ATAD2BQ9ULI0 1458 aa21.12■□□□□ 0.97
NCOA1-205ENST00000406961 DCAF11Q8TEB1 546 aa21.12■□□□□ 0.97
NCOA1-205ENST00000406961 FMN1Q68DA7 1419 aa21.11■□□□□ 0.97
NCOA1-205ENST00000406961 KANK1Q14678 1352 aa21.1■□□□□ 0.97
NCOA1-205ENST00000406961 POGKQ9P215 609 aa21.09■□□□□ 0.97
NCOA1-205ENST00000406961 PPM1GO15355 546 aaPredicted RBP21.07■□□□□ 0.96
NCOA1-205ENST00000406961 SMARCA4P51532 1647 aa21.07■□□□□ 0.96
NCOA1-205ENST00000406961 RAPGEF2Q9Y4G8 1499 aa21.06■□□□□ 0.96
NCOA1-205ENST00000406961 SUPT16HQ9Y5B9 1047 aaKnown RBP21.05■□□□□ 0.96
NCOA1-205ENST00000406961 ANP32BQ92688 251 aaKnown RBP21.05■□□□□ 0.96
NCOA1-205ENST00000406961 CC2D1BQ5T0F9 858 aaKnown RBP21.04■□□□□ 0.96
NCOA1-205ENST00000406961 TMF1P82094 1093 aa21.02■□□□□ 0.96
NCOA1-205ENST00000406961 PKD2Q13563 968 aa21.02■□□□□ 0.96
NCOA1-205ENST00000406961 RAB3GAP2Q9H2M9 1393 aa21.01■□□□□ 0.95
NCOA1-205ENST00000406961 NEUROD2Q15784 382 aa21.01■□□□□ 0.95
NCOA1-205ENST00000406961 FOXD1Q16676 465 aa21■□□□□ 0.95
NCOA1-205ENST00000406961 FHOD3Q2V2M9 1422 aa21■□□□□ 0.95
NCOA1-205ENST00000406961 A0A0G2JS52 829 aa20.99■□□□□ 0.95
NCOA1-205ENST00000406961 NBR1Q14596 966 aa20.99■□□□□ 0.95
NCOA1-205ENST00000406961 HSPA5P11021 654 aaKnown RBP20.99■□□□□ 0.95
NCOA1-205ENST00000406961 MAPK8IP3Q9UPT6 1336 aa20.99■□□□□ 0.95
NCOA1-205ENST00000406961 NUDCQ9Y266 331 aa20.98■□□□□ 0.95
NCOA1-205ENST00000406961 TNNT2P45379 298 aaPredicted RBP20.98■□□□□ 0.95
NCOA1-205ENST00000406961 MPHOSPH9Q99550 1183 aa20.94■□□□□ 0.94
NCOA1-205ENST00000406961 MLECQ14165 292 aa20.93■□□□□ 0.94
NCOA1-205ENST00000406961 GGT6Q6P531 493 aa20.92■□□□□ 0.94
NCOA1-205ENST00000406961 ANKRD30AQ9BXX3 1397 aa20.92■□□□□ 0.94
NCOA1-205ENST00000406961 LAS1LQ9Y4W2 734 aaKnown RBP20.91■□□□□ 0.94
NCOA1-205ENST00000406961 FTSJ3Q8IY81 847 aaKnown RBP20.91■□□□□ 0.94
NCOA1-205ENST00000406961 EFCAB2Q5VUJ9 269 aa20.91■□□□□ 0.94
NCOA1-205ENST00000406961 HAP1P54257 671 aaPredicted RBP20.9■□□□□ 0.94
NCOA1-205ENST00000406961 NUP155O75694 1391 aa20.9■□□□□ 0.94
NCOA1-205ENST00000406961 RUSC2Q8N2Y8 1516 aa20.89■□□□□ 0.93
NCOA1-205ENST00000406961 FANCD2Q9BXW9 1451 aa20.88■□□□□ 0.93
NCOA1-205ENST00000406961 CCER2I3L3R5 266 aa20.88■□□□□ 0.93
NCOA1-205ENST00000406961 DDRGK1Q96HY6 314 aa20.87■□□□□ 0.93
NCOA1-205ENST00000406961 U2SURPO15042 1029 aaKnown RBP20.87■□□□□ 0.93
NCOA1-205ENST00000406961 PPP4R2Q9NY27 417 aa20.86■□□□□ 0.93
NCOA1-205ENST00000406961 HDGFP51858 240 aaKnown RBP20.85■□□□□ 0.93
NCOA1-205ENST00000406961 SRPK2P78362 688 aaKnown RBP20.84■□□□□ 0.93
NCOA1-205ENST00000406961 BECN1Q14457 450 aa20.84■□□□□ 0.93
NCOA1-205ENST00000406961 LMOD2Q6P5Q4 547 aa20.84■□□□□ 0.93
NCOA1-205ENST00000406961 FRAT1Q92837 279 aaPredicted RBP20.83■□□□□ 0.93
NCOA1-205ENST00000406961 SAFB2Q14151 953 aaKnown RBP eCLIP20.83■□□□□ 0.92
NCOA1-205ENST00000406961 HNRNPMP52272 730 aaKnown RBP eCLIP20.82■□□□□ 0.925e-8■■■■■ 28.9
NCOA1-205ENST00000406961 TRHP20396 242 aaPredicted RBP20.82■□□□□ 0.92
NCOA1-205ENST00000406961 CCDC18Q5T9S5 1454 aa20.82■□□□□ 0.92
NCOA1-205ENST00000406961 ARXQ96QS3 562 aa20.82■□□□□ 0.92
NCOA1-205ENST00000406961 MORC1Q86VD1 984 aa20.81■□□□□ 0.92
NCOA1-205ENST00000406961 ROCK2O75116 1388 aaKnown RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms