RNA–Protein interactions for RNA: ENST00000406772.5

GGA1-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 2 BASIC

Gene GGA1, Length 3,205 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-206ENST00000406772 WDR97A6NE52 1622 aa20.66■□□□□ 0.9
GGA1-206ENST00000406772 CDK11AQ9UQ88 783 aaPredicted RBP20.66■□□□□ 0.9
GGA1-206ENST00000406772 SETD5Q9C0A6 1442 aa20.66■□□□□ 0.9
GGA1-206ENST00000406772 KIF27Q86VH2 1401 aa20.65■□□□□ 0.9
GGA1-206ENST00000406772 PPP1R15AO75807 674 aaPredicted RBP20.65■□□□□ 0.9
GGA1-206ENST00000406772 TONSLQ96HA7 1378 aa20.64■□□□□ 0.89
GGA1-206ENST00000406772 MSH5O43196 834 aa20.61■□□□□ 0.89
GGA1-206ENST00000406772 PRXQ9BXM0 1461 aa20.6■□□□□ 0.89
GGA1-206ENST00000406772 FAM9BQ8IZU0 186 aa20.59■□□□□ 0.89
GGA1-206ENST00000406772 POLR3GLQ9BT43 218 aa20.59■□□□□ 0.89
GGA1-206ENST00000406772 ARHGAP35Q9NRY4 1499 aa20.59■□□□□ 0.89
GGA1-206ENST00000406772 PHLDB1Q86UU1 1377 aa20.58■□□□□ 0.89
GGA1-206ENST00000406772 MAPKBP1O60336 1514 aa20.56■□□□□ 0.88
GGA1-206ENST00000406772 CHIC2Q9UKJ5 165 aa20.54■□□□□ 0.88
GGA1-206ENST00000406772 ARID3CA6NKF2 412 aa20.53■□□□□ 0.88
GGA1-206ENST00000406772 B4GALNT3Q6L9W6 998 aa20.52■□□□□ 0.88
GGA1-206ENST00000406772 TOP2BQ02880 1626 aa20.52■□□□□ 0.88
GGA1-206ENST00000406772 CCER2I3L3R5 266 aa20.51■□□□□ 0.87
GGA1-206ENST00000406772 NBR1Q14596 966 aa20.51■□□□□ 0.87
GGA1-206ENST00000406772 CUX2O14529 1486 aa20.5■□□□□ 0.87
GGA1-206ENST00000406772 RRP7BPQ9NSQ0 103 aa20.47■□□□□ 0.87
GGA1-206ENST00000406772 ERICH3Q5RHP9 1530 aa20.46■□□□□ 0.87
GGA1-206ENST00000406772 PEG3Q9GZU2 1588 aa20.43■□□□□ 0.86
GGA1-206ENST00000406772 CUX1P39880 1505 aa20.43■□□□□ 0.86
GGA1-206ENST00000406772 CARMIL1Q5VZK9 1371 aa20.43■□□□□ 0.86
GGA1-206ENST00000406772 CCDC184Q52MB2 194 aa20.42■□□□□ 0.86
GGA1-206ENST00000406772 FHOD3Q2V2M9 1422 aa20.4■□□□□ 0.86
GGA1-206ENST00000406772 MRS2Q9HD23 443 aa20.4■□□□□ 0.86
GGA1-206ENST00000406772 FOXD1Q16676 465 aa20.39■□□□□ 0.85
GGA1-206ENST00000406772 HSPA5P11021 654 aaKnown RBP20.38■□□□□ 0.85
GGA1-206ENST00000406772 LRRC9Q6ZRR7 1453 aa20.37■□□□□ 0.85
GGA1-206ENST00000406772 IGF1RP08069 1367 aa20.37■□□□□ 0.85
GGA1-206ENST00000406772 ZNF326Q5BKZ1 582 aaKnown RBP20.34■□□□□ 0.85
GGA1-206ENST00000406772 MTUS2Q5JR59 1369 aa20.34■□□□□ 0.85
GGA1-206ENST00000406772 TIAM1Q13009 1591 aa20.32■□□□□ 0.84
GGA1-206ENST00000406772 PPP4R2Q9NY27 417 aa20.3■□□□□ 0.84
GGA1-206ENST00000406772 TIMELESSQ9UNS1 1208 aa20.3■□□□□ 0.84
GGA1-206ENST00000406772 DEKP35659 375 aaKnown RBP20.29■□□□□ 0.84
GGA1-206ENST00000406772 EIF4G2P78344 907 aaKnown RBP eCLIP20.27■□□□□ 0.84
GGA1-206ENST00000406772 WASHC2AQ641Q2 1341 aa20.27■□□□□ 0.84
GGA1-206ENST00000406772 BIVM-ERCC5R4GMW8 1640 aa20.26■□□□□ 0.83
GGA1-206ENST00000406772 NPM2Q86SE8 214 aaKnown RBP20.25■□□□□ 0.83
GGA1-206ENST00000406772 FHAD1B1AJZ9 1412 aa20.25■□□□□ 0.83
GGA1-206ENST00000406772 FANCIQ9NVI1 1328 aa20.24■□□□□ 0.83
GGA1-206ENST00000406772 SALL2Q9Y467 1007 aaPredicted RBP20.23■□□□□ 0.83
GGA1-206ENST00000406772 CCDC18Q5T9S5 1454 aa20.22■□□□□ 0.83
GGA1-206ENST00000406772 PAK3O75914 559 aaPredicted RBP20.19■□□□□ 0.82
GGA1-206ENST00000406772 CCDC136Q96JN2 1154 aa20.18■□□□□ 0.82
GGA1-206ENST00000406772 C11orf95C9JLR9 678 aaPredicted RBP20.18■□□□□ 0.82
GGA1-206ENST00000406772 L3MBTL2Q969R5 705 aa20.17■□□□□ 0.82
GGA1-206ENST00000406772 NOP58Q9Y2X3 529 aaKnown RBP20.16■□□□□ 0.82
GGA1-206ENST00000406772 PCF11O94913 1555 aaKnown RBP20.16■□□□□ 0.82
GGA1-206ENST00000406772 RTL5Q5HYW3 569 aaPredicted RBP20.14■□□□□ 0.82
GGA1-206ENST00000406772 FGD5Q6ZNL6 1462 aa20.14■□□□□ 0.81
GGA1-206ENST00000406772 PRKRIP1Q9H875 184 aaPredicted RBP20.14■□□□□ 0.81
GGA1-206ENST00000406772 FGD6Q6ZV73 1430 aa20.13■□□□□ 0.81
GGA1-206ENST00000406772 PTPRKQ15262 1439 aa20.12■□□□□ 0.81
GGA1-206ENST00000406772 RTN4Q9NQC3 1192 aaKnown RBP20.11■□□□□ 0.81
GGA1-206ENST00000406772 AQRO60306 1485 aaKnown RBP eCLIP20.1■□□□□ 0.814e-7■■■■□ 26.1
GGA1-206ENST00000406772 CFTRP13569 1480 aa20.1■□□□□ 0.81
GGA1-206ENST00000406772 ANP32AP39687 249 aaKnown RBP20.1■□□□□ 0.81
GGA1-206ENST00000406772 NCAPD3P42695 1498 aa20.09■□□□□ 0.81
GGA1-206ENST00000406772 RAD54L2Q9Y4B4 1467 aa20.08■□□□□ 0.81
GGA1-206ENST00000406772 UACAQ9BZF9 1416 aa20.07■□□□□ 0.8
GGA1-206ENST00000406772 MPHOSPH9Q99550 1183 aa20.05■□□□□ 0.8
GGA1-206ENST00000406772 ZBTB47Q9UFB7 747 aaPredicted RBP20.04■□□□□ 0.8
GGA1-206ENST00000406772 AKNAQ7Z591 1439 aa20.04■□□□□ 0.8
GGA1-206ENST00000406772 LAS1LQ9Y4W2 734 aaKnown RBP20.03■□□□□ 0.8
GGA1-206ENST00000406772 SLC4A1APQ9BWU0 796 aaKnown RBP20.02■□□□□ 0.8
GGA1-206ENST00000406772 FMN1Q68DA7 1419 aa20.01■□□□□ 0.79
GGA1-206ENST00000406772 NBPF8Q3BBV2 869 aa20.01■□□□□ 0.79
GGA1-206ENST00000406772 NAIPQ13075 1403 aa20■□□□□ 0.79
GGA1-206ENST00000406772 CADPSQ9ULU8 1353 aa19.99■□□□□ 0.79
GGA1-206ENST00000406772 TDRD9Q8NDG6 1382 aaKnown RBP19.99■□□□□ 0.79
GGA1-206ENST00000406772 ZBED9Q6R2W3 1325 aa19.98■□□□□ 0.79
GGA1-206ENST00000406772 CNTLNQ9NXG0 1405 aa19.98■□□□□ 0.79
GGA1-206ENST00000406772 TMC1Q8TDI8 760 aa19.98■□□□□ 0.79
GGA1-206ENST00000406772 HFM1A2PYH4 1435 aa19.98■□□□□ 0.79
GGA1-206ENST00000406772 ZNF777Q9ULD5 760 aaPredicted RBP19.97■□□□□ 0.79
GGA1-206ENST00000406772 CCDC7Q96M83 1385 aa19.97■□□□□ 0.79
GGA1-206ENST00000406772 MAP3K1Q13233 1512 aa19.96■□□□□ 0.79
GGA1-206ENST00000406772 KIF7Q2M1P5 1343 aa19.96■□□□□ 0.79
GGA1-206ENST00000406772 CASKIN1Q8WXD9 1431 aa19.96■□□□□ 0.79
GGA1-206ENST00000406772 KDM2AQ9Y2K7 1162 aa19.94■□□□□ 0.78
GGA1-206ENST00000406772 ERICH6BQ5W0A0 696 aa19.94■□□□□ 0.78
GGA1-206ENST00000406772 NCOA2Q15596 1464 aa19.94■□□□□ 0.78
GGA1-206ENST00000406772 HMGXB3Q12766 1538 aa19.93■□□□□ 0.78
GGA1-206ENST00000406772 FYCO1Q9BQS8 1478 aa19.92■□□□□ 0.78
GGA1-206ENST00000406772 MYOM3Q5VTT5 1437 aa19.9■□□□□ 0.78
GGA1-206ENST00000406772 PTPN23Q9H3S7 1636 aa19.9■□□□□ 0.78
GGA1-206ENST00000406772 MYT1LQ9UL68 1186 aa19.9■□□□□ 0.78
GGA1-206ENST00000406772 IPO9Q96P70 1041 aaKnown RBP19.89■□□□□ 0.77
GGA1-206ENST00000406772 NUDCQ9Y266 331 aa19.89■□□□□ 0.77
GGA1-206ENST00000406772 ZNF644Q9H582 1327 aaPredicted RBP19.87■□□□□ 0.77
GGA1-206ENST00000406772 ANO8Q9HCE9 1232 aaPredicted RBP19.87■□□□□ 0.77
GGA1-206ENST00000406772 SKAP1Q86WV1 359 aa19.86■□□□□ 0.77
GGA1-206ENST00000406772 CFAP43Q8NDM7 1665 aa19.86■□□□□ 0.77
GGA1-206ENST00000406772 IL27Q8NEV9 243 aa19.85■□□□□ 0.77
GGA1-206ENST00000406772 NESP48681 1621 aa19.85■□□□□ 0.77
GGA1-206ENST00000406772 FANCD2Q9BXW9 1451 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms