RNA–Protein interactions for RNA: ENST00000406451.8

HDAC9-204, Transcript of histone deacetylase 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HDAC9, Length 9,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-204ENST00000406451 MYT1Q01538 1121 aa6.79□□□□□ -1.32
HDAC9-204ENST00000406451 ACIN1Q9UKV3 1341 aaKnown RBP6.79□□□□□ -1.32
HDAC9-204ENST00000406451 MROH2BQ7Z745 1585 aa6.79□□□□□ -1.32
HDAC9-204ENST00000406451 SENP3Q9H4L4 574 aaPredicted RBP6.78□□□□□ -1.32
HDAC9-204ENST00000406451 CARMIL1Q5VZK9 1371 aa6.78□□□□□ -1.32
HDAC9-204ENST00000406451 CCDC88BA6NC98 1476 aa6.77□□□□□ -1.33
HDAC9-204ENST00000406451 WIZO95785 1651 aa6.77□□□□□ -1.33
HDAC9-204ENST00000406451 A0A0G2JS52 829 aa6.76□□□□□ -1.33
HDAC9-204ENST00000406451 FHAD1B1AJZ9 1412 aa6.76□□□□□ -1.33
HDAC9-204ENST00000406451 CARMIL2Q6F5E8 1435 aa6.76□□□□□ -1.33
HDAC9-204ENST00000406451 TOP2AP11388 1531 aaKnown RBP6.76□□□□□ -1.33
HDAC9-204ENST00000406451 SOGA1O94964 1423 aa6.75□□□□□ -1.33
HDAC9-204ENST00000406451 CCNB3Q8WWL7 1395 aa6.75□□□□□ -1.33
HDAC9-204ENST00000406451 HAP1P54257 671 aaPredicted RBP6.75□□□□□ -1.33
HDAC9-204ENST00000406451 SMARCA4P51532 1647 aa6.74□□□□□ -1.33
HDAC9-204ENST00000406451 TNIKQ9UKE5 1360 aa6.74□□□□□ -1.33
HDAC9-204ENST00000406451 ZBTB7CA1YPR0 619 aa6.74□□□□□ -1.33
HDAC9-204ENST00000406451 PLEKHG5O94827 1062 aa6.74□□□□□ -1.33
HDAC9-204ENST00000406451 ABCC8Q09428 1581 aa6.73□□□□□ -1.33
HDAC9-204ENST00000406451 KANK1Q14678 1352 aa6.73□□□□□ -1.33
HDAC9-204ENST00000406451 RGL3Q3MIN7 710 aa6.72□□□□□ -1.33
HDAC9-204ENST00000406451 CADPSQ9ULU8 1353 aa6.72□□□□□ -1.33
HDAC9-204ENST00000406451 WDR43Q15061 677 aaKnown RBP eCLIP6.72□□□□□ -1.33
HDAC9-204ENST00000406451 RTL5Q5HYW3 569 aaPredicted RBP6.72□□□□□ -1.33
HDAC9-204ENST00000406451 NPM2Q86SE8 214 aaKnown RBP6.72□□□□□ -1.33
HDAC9-204ENST00000406451 TDRD9Q8NDG6 1382 aaKnown RBP6.71□□□□□ -1.33
HDAC9-204ENST00000406451 TMC1Q8TDI8 760 aa6.71□□□□□ -1.34
HDAC9-204ENST00000406451 MLECQ14165 292 aa6.7□□□□□ -1.34
HDAC9-204ENST00000406451 DDX10Q13206 875 aaKnown RBP6.7□□□□□ -1.34
HDAC9-204ENST00000406451 ATAD2BQ9ULI0 1458 aa6.7□□□□□ -1.34
HDAC9-204ENST00000406451 FAM9BQ8IZU0 186 aa6.69□□□□□ -1.34
HDAC9-204ENST00000406451 EIF4G2P78344 907 aaKnown RBP eCLIP6.69□□□□□ -1.34
HDAC9-204ENST00000406451 CDCA8Q53HL2 280 aa6.68□□□□□ -1.34
HDAC9-204ENST00000406451 POGKQ9P215 609 aa6.68□□□□□ -1.34
HDAC9-204ENST00000406451 HDGFP51858 240 aaKnown RBP6.68□□□□□ -1.34
HDAC9-204ENST00000406451 SALL2Q9Y467 1007 aaPredicted RBP6.67□□□□□ -1.34
HDAC9-204ENST00000406451 FANCD2Q9BXW9 1451 aa6.67□□□□□ -1.34
HDAC9-204ENST00000406451 HNRNPUQ00839 825 aaKnown RBP eCLIP6.67□□□□□ -1.34
HDAC9-204ENST00000406451 LMOD2Q6P5Q4 547 aa6.67□□□□□ -1.34
HDAC9-204ENST00000406451 FMN1Q68DA7 1419 aa6.66□□□□□ -1.34
HDAC9-204ENST00000406451 ARHGAP35Q9NRY4 1499 aa6.66□□□□□ -1.34
HDAC9-204ENST00000406451 MRS2Q9HD23 443 aa6.65□□□□□ -1.34
HDAC9-204ENST00000406451 CFAP53Q96M91 514 aa6.65□□□□□ -1.35
HDAC9-204ENST00000406451 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.64□□□□□ -1.35
HDAC9-204ENST00000406451 EFCAB2Q5VUJ9 269 aa6.64□□□□□ -1.35
HDAC9-204ENST00000406451 KNSTRNQ9Y448 316 aa6.64□□□□□ -1.35
HDAC9-204ENST00000406451 CARD11Q9BXL7 1154 aa6.64□□□□□ -1.35
HDAC9-204ENST00000406451 GGT6Q6P531 493 aa6.63□□□□□ -1.35
HDAC9-204ENST00000406451 PPM1GO15355 546 aaPredicted RBP6.63□□□□□ -1.35
HDAC9-204ENST00000406451 RAPGEF2Q9Y4G8 1499 aa6.63□□□□□ -1.35
HDAC9-204ENST00000406451 HIRIP3Q9BW71 556 aaPredicted RBP6.62□□□□□ -1.35
HDAC9-204ENST00000406451 MYH16Q9H6N6 1097 aa6.62□□□□□ -1.35
HDAC9-204ENST00000406451 GTF3C3Q9Y5Q9 886 aa6.62□□□□□ -1.35
HDAC9-204ENST00000406451 OSCARQ8IYS5 282 aa6.61□□□□□ -1.35
HDAC9-204ENST00000406451 UPF2Q9HAU5 1272 aaKnown RBP6.61□□□□□ -1.35
HDAC9-204ENST00000406451 HSP90AA1P07900 732 aaKnown RBP6.61□□□□□ -1.35
HDAC9-204ENST00000406451 VPS8Q8N3P4 1428 aa6.61□□□□□ -1.35
HDAC9-204ENST00000406451 JPH4Q96JJ6 628 aa6.6□□□□□ -1.35
HDAC9-204ENST00000406451 ARXQ96QS3 562 aa6.6□□□□□ -1.35
HDAC9-204ENST00000406451 CCDC18Q5T9S5 1454 aa6.6□□□□□ -1.35
HDAC9-204ENST00000406451 ANP32AP39687 249 aaKnown RBP6.6□□□□□ -1.35
HDAC9-204ENST00000406451 CYB5RLQ6IPT4 315 aa6.58□□□□□ -1.36
HDAC9-204ENST00000406451 FHOD3Q2V2M9 1422 aa6.58□□□□□ -1.36
HDAC9-204ENST00000406451 PRDM2Q13029 1718 aa6.58□□□□□ -1.36
HDAC9-204ENST00000406451 ANKRD30AQ9BXX3 1397 aa6.58□□□□□ -1.36
HDAC9-204ENST00000406451 DCAF11Q8TEB1 546 aa6.58□□□□□ -1.36
HDAC9-204ENST00000406451 NUDCQ9Y266 331 aa6.58□□□□□ -1.36
HDAC9-204ENST00000406451 GAPVD1Q14C86 1478 aa6.57□□□□□ -1.36
HDAC9-204ENST00000406451 MAPK8IP3Q9UPT6 1336 aa6.57□□□□□ -1.36
HDAC9-204ENST00000406451 SRPK2P78362 688 aaKnown RBP6.57□□□□□ -1.36
HDAC9-204ENST00000406451 SPAG9O60271 1321 aaKnown RBP6.57□□□□□ -1.36
HDAC9-204ENST00000406451 NPHP1O15259 732 aa6.57□□□□□ -1.36
HDAC9-204ENST00000406451 PTPRGP23470 1445 aa6.57□□□□□ -1.36
HDAC9-204ENST00000406451 CC2D2AQ9P2K1 1620 aa6.56□□□□□ -1.36
HDAC9-204ENST00000406451 FGD5Q6ZNL6 1462 aa6.56□□□□□ -1.36
HDAC9-204ENST00000406451 SAFB2Q14151 953 aaKnown RBP eCLIP6.56□□□□□ -1.36
HDAC9-204ENST00000406451 TMF1P82094 1093 aa6.56□□□□□ -1.36
HDAC9-204ENST00000406451 PKD2Q13563 968 aa6.56□□□□□ -1.36
HDAC9-204ENST00000406451 EID1Q9Y6B2 187 aa6.56□□□□□ -1.36
HDAC9-204ENST00000406451 TNNT2P45379 298 aaPredicted RBP6.56□□□□□ -1.36
HDAC9-204ENST00000406451 FKBP8Q14318 412 aa6.56□□□□□ -1.36
HDAC9-204ENST00000406451 CCDC136Q96JN2 1154 aa6.56□□□□□ -1.36
HDAC9-204ENST00000406451 KIF3BO15066 747 aa6.55□□□□□ -1.36
HDAC9-204ENST00000406451 SETD5Q9C0A6 1442 aa6.55□□□□□ -1.36
HDAC9-204ENST00000406451 STK26Q9P289 416 aa6.55□□□□□ -1.36
HDAC9-204ENST00000406451 NUP155O75694 1391 aa6.55□□□□□ -1.36
HDAC9-204ENST00000406451 RSPH4AQ5TD94 716 aa6.55□□□□□ -1.36
HDAC9-204ENST00000406451 NCAPD3P42695 1498 aa6.54□□□□□ -1.36
HDAC9-204ENST00000406451 WASHC2CQ9Y4E1 1318 aa6.54□□□□□ -1.36
HDAC9-204ENST00000406451 SIN3AQ96ST3 1273 aa6.54□□□□□ -1.36
HDAC9-204ENST00000406451 PNNQ9H307 717 aaKnown RBP6.54□□□□□ -1.36
HDAC9-204ENST00000406451 SOX12O15370 315 aa6.53□□□□□ -1.36
HDAC9-204ENST00000406451 HNRNPMP52272 730 aaKnown RBP eCLIP6.53□□□□□ -1.36
HDAC9-204ENST00000406451 LAS1LQ9Y4W2 734 aaKnown RBP6.53□□□□□ -1.36
HDAC9-204ENST00000406451 U2SURPO15042 1029 aaKnown RBP6.53□□□□□ -1.36
HDAC9-204ENST00000406451 KANK4Q5T7N3 995 aaPredicted RBP6.52□□□□□ -1.37
HDAC9-204ENST00000406451 HDGFL2Q7Z4V5 671 aaPredicted RBP6.52□□□□□ -1.37
HDAC9-204ENST00000406451 NEUROD2Q15784 382 aa6.52□□□□□ -1.37
HDAC9-204ENST00000406451 PAK3O75914 559 aaPredicted RBP6.52□□□□□ -1.37
HDAC9-204ENST00000406451 CC2D1BQ5T0F9 858 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms