RNA–Protein interactions for RNA: ENST00000406381.6

ERBB2-202, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5 BASIC

Gene ERBB2, Length 4,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-202ENST00000406381 SIN3AQ96ST3 1273 aa17.21■□□□□ 0.35
ERBB2-202ENST00000406381 RTN4Q9NQC3 1192 aaKnown RBP17.21■□□□□ 0.35
ERBB2-202ENST00000406381 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.21■□□□□ 0.34
ERBB2-202ENST00000406381 CHIC2Q9UKJ5 165 aa17.2■□□□□ 0.34
ERBB2-202ENST00000406381 TIMELESSQ9UNS1 1208 aa17.18■□□□□ 0.34
ERBB2-202ENST00000406381 ARID3CA6NKF2 412 aa17.18■□□□□ 0.34
ERBB2-202ENST00000406381 ERICH6BQ5W0A0 696 aa17.17■□□□□ 0.34
ERBB2-202ENST00000406381 WRNQ14191 1432 aaPredicted RBP eCLIP17.16■□□□□ 0.34
ERBB2-202ENST00000406381 ARXQ96QS3 562 aa17.15■□□□□ 0.34
ERBB2-202ENST00000406381 HSP90AA1P07900 732 aaKnown RBP17.15■□□□□ 0.34
ERBB2-202ENST00000406381 LAS1LQ9Y4W2 734 aaKnown RBP17.15■□□□□ 0.34
ERBB2-202ENST00000406381 MTUS2Q5JR59 1369 aa17.13■□□□□ 0.33
ERBB2-202ENST00000406381 CCNB3Q8WWL7 1395 aa17.12■□□□□ 0.33
ERBB2-202ENST00000406381 ZNF777Q9ULD5 760 aaPredicted RBP17.11■□□□□ 0.33
ERBB2-202ENST00000406381 SOGA1O94964 1423 aa17.1■□□□□ 0.33
ERBB2-202ENST00000406381 VPS8Q8N3P4 1428 aa17.08■□□□□ 0.32
ERBB2-202ENST00000406381 BECN1Q14457 450 aa17.08■□□□□ 0.32
ERBB2-202ENST00000406381 FBLN2P98095 1184 aa17.06■□□□□ 0.32
ERBB2-202ENST00000406381 RRP7BPQ9NSQ0 103 aa17.05■□□□□ 0.32
ERBB2-202ENST00000406381 WDR43Q15061 677 aaKnown RBP eCLIP17.04■□□□□ 0.321e-5■■■■□ 24.6
ERBB2-202ENST00000406381 SENP3-EIF4A1A0A087X0R7 540 aa17.03■□□□□ 0.32
ERBB2-202ENST00000406381 TRIM44Q96DX7 344 aaPredicted RBP16.99■□□□□ 0.31
ERBB2-202ENST00000406381 KDM2AQ9Y2K7 1162 aa16.99■□□□□ 0.31
ERBB2-202ENST00000406381 KCNH8Q96L42 1107 aa16.97■□□□□ 0.31
ERBB2-202ENST00000406381 CECR2Q9BXF3 1484 aa16.97■□□□□ 0.31
ERBB2-202ENST00000406381 SETD5Q9C0A6 1442 aa16.96■□□□□ 0.3
ERBB2-202ENST00000406381 FANCIQ9NVI1 1328 aa16.95■□□□□ 0.3
ERBB2-202ENST00000406381 KANK4Q5T7N3 995 aaPredicted RBP16.94■□□□□ 0.3
ERBB2-202ENST00000406381 IPO9Q96P70 1041 aaKnown RBP16.94■□□□□ 0.3
ERBB2-202ENST00000406381 CCDC88BA6NC98 1476 aa16.93■□□□□ 0.3
ERBB2-202ENST00000406381 NAP1L5Q96NT1 182 aaPredicted RBP16.92■□□□□ 0.3
ERBB2-202ENST00000406381 PPP1R15AO75807 674 aaPredicted RBP16.91■□□□□ 0.3
ERBB2-202ENST00000406381 KIF27Q86VH2 1401 aa16.91■□□□□ 0.3
ERBB2-202ENST00000406381 RAB3GAP2Q9H2M9 1393 aa16.91■□□□□ 0.3
ERBB2-202ENST00000406381 DHX57Q6P158 1386 aaKnown RBP16.9■□□□□ 0.3
ERBB2-202ENST00000406381 HSPA5P11021 654 aaKnown RBP16.87■□□□□ 0.29
ERBB2-202ENST00000406381 RGS3P49796 1198 aa16.87■□□□□ 0.29
ERBB2-202ENST00000406381 BAZ1AQ9NRL2 1556 aaPredicted RBP16.87■□□□□ 0.29
ERBB2-202ENST00000406381 TCERG1O14776 1098 aaKnown RBP16.86■□□□□ 0.29
ERBB2-202ENST00000406381 TSPY4P0CV99 314 aa16.85■□□□□ 0.29
ERBB2-202ENST00000406381 TSPY10P0CW01 314 aa16.85■□□□□ 0.29
ERBB2-202ENST00000406381 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.85■□□□□ 0.29
ERBB2-202ENST00000406381 ABCC8Q09428 1581 aa16.84■□□□□ 0.29
ERBB2-202ENST00000406381 CARD11Q9BXL7 1154 aa16.83■□□□□ 0.28
ERBB2-202ENST00000406381 GOLGA6L22H0YM25 854 aa16.83■□□□□ 0.28
ERBB2-202ENST00000406381 L1TD1Q5T7N2 865 aaKnown RBP16.81■□□□□ 0.28
ERBB2-202ENST00000406381 MROH2BQ7Z745 1585 aa16.81■□□□□ 0.28
ERBB2-202ENST00000406381 USP35Q9P2H5 1018 aa16.8■□□□□ 0.28
ERBB2-202ENST00000406381 FHAD1B1AJZ9 1412 aa16.79■□□□□ 0.28
ERBB2-202ENST00000406381 NUDCQ9Y266 331 aa16.77■□□□□ 0.28
ERBB2-202ENST00000406381 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.77■□□□□ 0.27
ERBB2-202ENST00000406381 NACADO15069 1562 aa16.76■□□□□ 0.27
ERBB2-202ENST00000406381 RCAN3Q9UKA8 241 aa16.74■□□□□ 0.27
ERBB2-202ENST00000406381 KNSTRNQ9Y448 316 aa16.74■□□□□ 0.27
ERBB2-202ENST00000406381 TNNT2P45379 298 aaPredicted RBP16.73■□□□□ 0.27
ERBB2-202ENST00000406381 RGL3Q3MIN7 710 aa16.7■□□□□ 0.26
ERBB2-202ENST00000406381 NCLP19338 710 aaKnown RBP16.69■□□□□ 0.26
ERBB2-202ENST00000406381 PNNQ9H307 717 aaKnown RBP16.68■□□□□ 0.26
ERBB2-202ENST00000406381 BAZ1BQ9UIG0 1483 aaKnown RBP16.68■□□□□ 0.26
ERBB2-202ENST00000406381 SLC24A1O60721 1099 aa16.68■□□□□ 0.26
ERBB2-202ENST00000406381 CDCA8Q53HL2 280 aa16.68■□□□□ 0.26
ERBB2-202ENST00000406381 MYH16Q9H6N6 1097 aa16.67■□□□□ 0.26
ERBB2-202ENST00000406381 CHGAP10645 457 aaKnown RBP16.66■□□□□ 0.26
ERBB2-202ENST00000406381 ARHGAP35Q9NRY4 1499 aa16.66■□□□□ 0.26
ERBB2-202ENST00000406381 CC2D1BQ5T0F9 858 aaKnown RBP16.65■□□□□ 0.26
ERBB2-202ENST00000406381 ZBED9Q6R2W3 1325 aa16.65■□□□□ 0.26
ERBB2-202ENST00000406381 PTMAP06454 111 aaKnown RBP16.65■□□□□ 0.26
ERBB2-202ENST00000406381 FRAT1Q92837 279 aaPredicted RBP16.63■□□□□ 0.25
ERBB2-202ENST00000406381 GSE1Q14687 1217 aa16.63■□□□□ 0.25
ERBB2-202ENST00000406381 CFDP1Q9UEE9 299 aaPredicted RBP16.63■□□□□ 0.25
ERBB2-202ENST00000406381 CARMIL1Q5VZK9 1371 aa16.63■□□□□ 0.25
ERBB2-202ENST00000406381 FTSJ3Q8IY81 847 aaKnown RBP16.63■□□□□ 0.25
ERBB2-202ENST00000406381 PDE4AP27815 886 aa16.63■□□□□ 0.25
ERBB2-202ENST00000406381 DNTTIP2Q5QJE6 756 aaKnown RBP16.62■□□□□ 0.25
ERBB2-202ENST00000406381 RSPH6AQ9H0K4 717 aa16.62■□□□□ 0.25
ERBB2-202ENST00000406381 PRKRIP1Q9H875 184 aaPredicted RBP16.62■□□□□ 0.25
ERBB2-202ENST00000406381 RALBP1Q15311 655 aa16.6■□□□□ 0.25
ERBB2-202ENST00000406381 SLKQ9H2G2 1235 aaPredicted RBP16.6■□□□□ 0.25
ERBB2-202ENST00000406381 RUSC2Q8N2Y8 1516 aa16.59■□□□□ 0.25
ERBB2-202ENST00000406381 PDE3BQ13370 1112 aa16.59■□□□□ 0.25
ERBB2-202ENST00000406381 NEUROD2Q15784 382 aa16.59■□□□□ 0.25
ERBB2-202ENST00000406381 RAPGEF2Q9Y4G8 1499 aa16.59■□□□□ 0.25
ERBB2-202ENST00000406381 L3MBTL2Q969R5 705 aa16.59■□□□□ 0.25
ERBB2-202ENST00000406381 HSP90AB1P08238 724 aaKnown RBP16.58■□□□□ 0.25
ERBB2-202ENST00000406381 HSCBQ8IWL3 235 aa16.58■□□□□ 0.25
ERBB2-202ENST00000406381 MPHOSPH9Q99550 1183 aa16.58■□□□□ 0.25
ERBB2-202ENST00000406381 CFAP53Q96M91 514 aa16.57■□□□□ 0.24
ERBB2-202ENST00000406381 FOXD1Q16676 465 aa16.57■□□□□ 0.24
ERBB2-202ENST00000406381 MSNP26038 577 aaKnown RBP16.56■□□□□ 0.24
ERBB2-202ENST00000406381 WIZO95785 1651 aa16.56■□□□□ 0.24
ERBB2-202ENST00000406381 KTN1Q86UP2 1357 aaKnown RBP16.56■□□□□ 0.24
ERBB2-202ENST00000406381 DCAF11Q8TEB1 546 aa16.56■□□□□ 0.24
ERBB2-202ENST00000406381 FMN1Q68DA7 1419 aa16.55■□□□□ 0.24
ERBB2-202ENST00000406381 SPRYD3Q8NCJ5 442 aa16.55■□□□□ 0.24
ERBB2-202ENST00000406381 GOLGA6L3A6NEY3 463 aa16.54■□□□□ 0.24
ERBB2-202ENST00000406381 MS4A1P11836 297 aa16.54■□□□□ 0.24
ERBB2-202ENST00000406381 GZF1Q9H116 711 aaPredicted RBP16.54■□□□□ 0.24
ERBB2-202ENST00000406381 TMF1P82094 1093 aa16.53■□□□□ 0.24
ERBB2-202ENST00000406381 CUX2O14529 1486 aa16.53■□□□□ 0.24
ERBB2-202ENST00000406381 PLEKHD1A6NEE1 506 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms