RNA–Protein interactions for RNA: ENST00000405493.6

RAPGEF3-204, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-204ENST00000405493 ATAD2BQ9ULI0 1458 aa16.13■□□□□ 0.17
RAPGEF3-204ENST00000405493 ABCC8Q09428 1581 aa16.13■□□□□ 0.17
RAPGEF3-204ENST00000405493 TONSLQ96HA7 1378 aa16.13■□□□□ 0.17
RAPGEF3-204ENST00000405493 MROH2BQ7Z745 1585 aa16.13■□□□□ 0.17
RAPGEF3-204ENST00000405493 EIF4G1Q04637 1599 aaKnown RBP16.11■□□□□ 0.17
RAPGEF3-204ENST00000405493 ZBTB47Q9UFB7 747 aaPredicted RBP16.11■□□□□ 0.17
RAPGEF3-204ENST00000405493 OSCARQ8IYS5 282 aa16.09■□□□□ 0.17
RAPGEF3-204ENST00000405493 CCDC88BA6NC98 1476 aa16.09■□□□□ 0.17
RAPGEF3-204ENST00000405493 FHAD1B1AJZ9 1412 aa16.08■□□□□ 0.17
RAPGEF3-204ENST00000405493 HDGFP51858 240 aaKnown RBP16.08■□□□□ 0.16
RAPGEF3-204ENST00000405493 TOP2AP11388 1531 aaKnown RBP16.06■□□□□ 0.16
RAPGEF3-204ENST00000405493 TDRD9Q8NDG6 1382 aaKnown RBP16.05■□□□□ 0.16
RAPGEF3-204ENST00000405493 CCNB3Q8WWL7 1395 aa16.03■□□□□ 0.16
RAPGEF3-204ENST00000405493 CANXP27824 592 aaKnown RBP16.01■□□□□ 0.15
RAPGEF3-204ENST00000405493 KANK1Q14678 1352 aa16■□□□□ 0.15
RAPGEF3-204ENST00000405493 TNIKQ9UKE5 1360 aa16■□□□□ 0.15
RAPGEF3-204ENST00000405493 HAP1P54257 671 aaPredicted RBP15.98■□□□□ 0.15
RAPGEF3-204ENST00000405493 FANCD2Q9BXW9 1451 aa15.98■□□□□ 0.15
RAPGEF3-204ENST00000405493 SMARCA4P51532 1647 aa15.97■□□□□ 0.15
RAPGEF3-204ENST00000405493 BCL11AQ9H165 835 aa15.96■□□□□ 0.15
RAPGEF3-204ENST00000405493 EFCAB2Q5VUJ9 269 aa15.95■□□□□ 0.14
RAPGEF3-204ENST00000405493 RRP7BPQ9NSQ0 103 aa15.95■□□□□ 0.14
RAPGEF3-204ENST00000405493 CEP162Q5TB80 1403 aa15.94■□□□□ 0.14
RAPGEF3-204ENST00000405493 NCAPD3P42695 1498 aa15.92■□□□□ 0.14
RAPGEF3-204ENST00000405493 KDM2AQ9Y2K7 1162 aa15.92■□□□□ 0.14
RAPGEF3-204ENST00000405493 NPM2Q86SE8 214 aaKnown RBP15.9■□□□□ 0.14
RAPGEF3-204ENST00000405493 JPH4Q96JJ6 628 aa15.9■□□□□ 0.14
RAPGEF3-204ENST00000405493 MLECQ14165 292 aa15.89■□□□□ 0.13
RAPGEF3-204ENST00000405493 CDCA8Q53HL2 280 aa15.87■□□□□ 0.13
RAPGEF3-204ENST00000405493 FMN1Q68DA7 1419 aa15.87■□□□□ 0.13
RAPGEF3-204ENST00000405493 FKBP8Q14318 412 aa15.86■□□□□ 0.13
RAPGEF3-204ENST00000405493 CYB5RLQ6IPT4 315 aa15.85■□□□□ 0.13
RAPGEF3-204ENST00000405493 DDX10Q13206 875 aaKnown RBP15.81■□□□□ 0.12
RAPGEF3-204ENST00000405493 WIZO95785 1651 aa15.81■□□□□ 0.12
RAPGEF3-204ENST00000405493 RSPH4AQ5TD94 716 aa15.81■□□□□ 0.12
RAPGEF3-204ENST00000405493 A0A0G2JS52 829 aa15.8■□□□□ 0.12
RAPGEF3-204ENST00000405493 POGKQ9P215 609 aa15.8■□□□□ 0.12
RAPGEF3-204ENST00000405493 RAPGEF2Q9Y4G8 1499 aa15.8■□□□□ 0.12
RAPGEF3-204ENST00000405493 MIER1Q8N108 512 aa15.8■□□□□ 0.12
RAPGEF3-204ENST00000405493 AEBP2Q6ZN18 517 aaPredicted RBP15.79■□□□□ 0.12
RAPGEF3-204ENST00000405493 RGL3Q3MIN7 710 aa15.78■□□□□ 0.12
RAPGEF3-204ENST00000405493 GGT6Q6P531 493 aa15.78■□□□□ 0.12
RAPGEF3-204ENST00000405493 PTPRGP23470 1445 aa15.78■□□□□ 0.12
RAPGEF3-204ENST00000405493 ZBTB7CA1YPR0 619 aa15.77■□□□□ 0.12
RAPGEF3-204ENST00000405493 FAM9BQ8IZU0 186 aa15.77■□□□□ 0.12
RAPGEF3-204ENST00000405493 HNRNPUQ00839 825 aaKnown RBP eCLIP15.76■□□□□ 0.11
RAPGEF3-204ENST00000405493 ANP32AP39687 249 aaKnown RBP15.76■□□□□ 0.11
RAPGEF3-204ENST00000405493 TMC1Q8TDI8 760 aa15.73■□□□□ 0.11
RAPGEF3-204ENST00000405493 WDR43Q15061 677 aaKnown RBP eCLIP15.72■□□□□ 0.11
RAPGEF3-204ENST00000405493 SALL2Q9Y467 1007 aaPredicted RBP15.72■□□□□ 0.11
RAPGEF3-204ENST00000405493 EIF4G2P78344 907 aaKnown RBP eCLIP15.71■□□□□ 0.11
RAPGEF3-204ENST00000405493 LMOD2Q6P5Q4 547 aa15.7■□□□□ 0.1
RAPGEF3-204ENST00000405493 SENP3Q9H4L4 574 aaPredicted RBP15.7■□□□□ 0.1
RAPGEF3-204ENST00000405493 EID1Q9Y6B2 187 aa15.7■□□□□ 0.1
RAPGEF3-204ENST00000405493 GAPVD1Q14C86 1478 aa15.69■□□□□ 0.1
RAPGEF3-204ENST00000405493 CFAP53Q96M91 514 aa15.69■□□□□ 0.1
RAPGEF3-204ENST00000405493 MRC2Q9UBG0 1479 aa15.68■□□□□ 0.1
RAPGEF3-204ENST00000405493 SPAG9O60271 1321 aaKnown RBP15.68■□□□□ 0.1
RAPGEF3-204ENST00000405493 CC2D2AQ9P2K1 1620 aa15.67■□□□□ 0.1
RAPGEF3-204ENST00000405493 PLEKHG5O94827 1062 aa15.67■□□□□ 0.1
RAPGEF3-204ENST00000405493 ARHGAP35Q9NRY4 1499 aa15.67■□□□□ 0.1
RAPGEF3-204ENST00000405493 CCDC18Q5T9S5 1454 aa15.66■□□□□ 0.1
RAPGEF3-204ENST00000405493 ANKRD30AQ9BXX3 1397 aa15.65■□□□□ 0.1
RAPGEF3-204ENST00000405493 HIRIP3Q9BW71 556 aaPredicted RBP15.65■□□□□ 0.1
RAPGEF3-204ENST00000405493 ANP32EQ9BTT0 268 aa15.63■□□□□ 0.09
RAPGEF3-204ENST00000405493 FAM69CQ0P6D2 419 aa15.62■□□□□ 0.09
RAPGEF3-204ENST00000405493 FGD5Q6ZNL6 1462 aa15.62■□□□□ 0.09
RAPGEF3-204ENST00000405493 IFT140Q96RY7 1462 aa15.61■□□□□ 0.09
RAPGEF3-204ENST00000405493 CARD11Q9BXL7 1154 aa15.61■□□□□ 0.09
RAPGEF3-204ENST00000405493 KIF3BO15066 747 aa15.61■□□□□ 0.09
RAPGEF3-204ENST00000405493 HMGXB3Q12766 1538 aa15.6■□□□□ 0.09
RAPGEF3-204ENST00000405493 GRIN2BQ13224 1484 aa15.6■□□□□ 0.09
RAPGEF3-204ENST00000405493 VPS8Q8N3P4 1428 aa15.59■□□□□ 0.09
RAPGEF3-204ENST00000405493 KNSTRNQ9Y448 316 aa15.59■□□□□ 0.09
RAPGEF3-204ENST00000405493 WASHC2CQ9Y4E1 1318 aa15.59■□□□□ 0.09
RAPGEF3-204ENST00000405493 MRS2Q9HD23 443 aa15.59■□□□□ 0.09
RAPGEF3-204ENST00000405493 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.57■□□□□ 0.08
RAPGEF3-204ENST00000405493 NUDCQ9Y266 331 aa15.56■□□□□ 0.08
RAPGEF3-204ENST00000405493 CFTRP13569 1480 aa15.53■□□□□ 0.08
RAPGEF3-204ENST00000405493 CCDC136Q96JN2 1154 aa15.53■□□□□ 0.08
RAPGEF3-204ENST00000405493 FHOD3Q2V2M9 1422 aa15.52■□□□□ 0.08
RAPGEF3-204ENST00000405493 AQRO60306 1485 aaKnown RBP eCLIP15.52■□□□□ 0.07
RAPGEF3-204ENST00000405493 HSP90AA1P07900 732 aaKnown RBP15.52■□□□□ 0.07
RAPGEF3-204ENST00000405493 EIF5BO60841 1220 aaKnown RBP15.51■□□□□ 0.07
RAPGEF3-204ENST00000405493 UPF2Q9HAU5 1272 aaKnown RBP15.51■□□□□ 0.07
RAPGEF3-204ENST00000405493 IRX6P78412 446 aaPredicted RBP15.51■□□□□ 0.07
RAPGEF3-204ENST00000405493 HNRNPMP52272 730 aaKnown RBP eCLIP15.5■□□□□ 0.07
RAPGEF3-204ENST00000405493 PNNQ9H307 717 aaKnown RBP15.5■□□□□ 0.07
RAPGEF3-204ENST00000405493 RAD54L2Q9Y4B4 1467 aa15.5■□□□□ 0.07
RAPGEF3-204ENST00000405493 SRPK2P78362 688 aaKnown RBP15.49■□□□□ 0.07
RAPGEF3-204ENST00000405493 NBR1Q14596 966 aa15.49■□□□□ 0.07
RAPGEF3-204ENST00000405493 TMF1P82094 1093 aa15.49■□□□□ 0.07
RAPGEF3-204ENST00000405493 DCAF11Q8TEB1 546 aa15.49■□□□□ 0.07
RAPGEF3-204ENST00000405493 PPM1GO15355 546 aaPredicted RBP15.49■□□□□ 0.07
RAPGEF3-204ENST00000405493 NUP155O75694 1391 aa15.49■□□□□ 0.07
RAPGEF3-204ENST00000405493 PKD2Q13563 968 aa15.48■□□□□ 0.07
RAPGEF3-204ENST00000405493 TIMELESSQ9UNS1 1208 aa15.47■□□□□ 0.07
RAPGEF3-204ENST00000405493 HDGFL2Q7Z4V5 671 aaPredicted RBP15.46■□□□□ 0.07
RAPGEF3-204ENST00000405493 IGF1RP08069 1367 aa15.45■□□□□ 0.06
RAPGEF3-204ENST00000405493 MAPK8IP3Q9UPT6 1336 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms