RNA–Protein interactions for RNA: ENST00000405409.6

RBFOX2-205, Transcript of RNA binding fox-1 homolog 2, humanhuman

TSL 1 (best) BASIC

Gene RBFOX2, Length 6,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-205ENST00000405409 WDR43Q15061 677 aaKnown RBP eCLIP10.41□□□□□ -0.74
RBFOX2-205ENST00000405409 GOLGA6L6A8MZA4 724 aa10.41□□□□□ -0.74
RBFOX2-205ENST00000405409 OSCARQ8IYS5 282 aa10.4□□□□□ -0.74
RBFOX2-205ENST00000405409 TMC1Q8TDI8 760 aa10.39□□□□□ -0.75
RBFOX2-205ENST00000405409 NPM1P06748 294 aaKnown RBP eCLIP10.39□□□□□ -0.75
RBFOX2-205ENST00000405409 ARID4BQ4LE39 1312 aaPredicted RBP10.39□□□□□ -0.75
RBFOX2-205ENST00000405409 DDX10Q13206 875 aaKnown RBP10.38□□□□□ -0.75
RBFOX2-205ENST00000405409 TAOK2Q9UL54 1235 aa10.38□□□□□ -0.75
RBFOX2-205ENST00000405409 A0A0G2JS52 829 aa10.38□□□□□ -0.75
RBFOX2-205ENST00000405409 PLPPR3Q6T4P5 718 aa10.37□□□□□ -0.75
RBFOX2-205ENST00000405409 LAS1LQ9Y4W2 734 aaKnown RBP10.37□□□□□ -0.75
RBFOX2-205ENST00000405409 CHGAP10645 457 aaKnown RBP10.37□□□□□ -0.75
RBFOX2-205ENST00000405409 SCAF1Q9H7N4 1312 aaKnown RBP10.36□□□□□ -0.75
RBFOX2-205ENST00000405409 CHAF1AQ13111 956 aaPredicted RBP10.36□□□□□ -0.75
RBFOX2-205ENST00000405409 STAG3Q9UJ98 1225 aa10.35□□□□□ -0.75
RBFOX2-205ENST00000405409 CASC1Q6TDU7 716 aa10.35□□□□□ -0.75
RBFOX2-205ENST00000405409 ARID3CA6NKF2 412 aa10.35□□□□□ -0.75
RBFOX2-205ENST00000405409 ARID3AQ99856 593 aa10.34□□□□□ -0.75
RBFOX2-205ENST00000405409 ZNF777Q9ULD5 760 aaPredicted RBP10.34□□□□□ -0.75
RBFOX2-205ENST00000405409 FOXD1Q16676 465 aa10.33□□□□□ -0.76
RBFOX2-205ENST00000405409 TONSLQ96HA7 1378 aa10.33□□□□□ -0.76
RBFOX2-205ENST00000405409 TNNT3P45378 269 aaPredicted RBP10.33□□□□□ -0.76
RBFOX2-205ENST00000405409 PPM1GO15355 546 aaPredicted RBP10.33□□□□□ -0.76
RBFOX2-205ENST00000405409 ZBTB7CA1YPR0 619 aa10.33□□□□□ -0.76
RBFOX2-205ENST00000405409 MSNP26038 577 aaKnown RBP10.33□□□□□ -0.76
RBFOX2-205ENST00000405409 ESF1Q9H501 851 aaKnown RBP10.3□□□□□ -0.76
RBFOX2-205ENST00000405409 FBLN2P98095 1184 aa10.3□□□□□ -0.76
RBFOX2-205ENST00000405409 DRC7Q8IY82 874 aa10.29□□□□□ -0.76
RBFOX2-205ENST00000405409 MRS2Q9HD23 443 aa10.29□□□□□ -0.76
RBFOX2-205ENST00000405409 CLSTN1O94985 981 aa10.29□□□□□ -0.76
RBFOX2-205ENST00000405409 NRDCO43847 1150 aa10.29□□□□□ -0.76
RBFOX2-205ENST00000405409 HSP90AB1P08238 724 aaKnown RBP10.29□□□□□ -0.76
RBFOX2-205ENST00000405409 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.29□□□□□ -0.76
RBFOX2-205ENST00000405409 P3H3Q8IVL6 736 aa10.27□□□□□ -0.77
RBFOX2-205ENST00000405409 NOP58Q9Y2X3 529 aaKnown RBP10.27□□□□□ -0.77
RBFOX2-205ENST00000405409 PLEKHG5O94827 1062 aa10.26□□□□□ -0.77
RBFOX2-205ENST00000405409 NOC3LQ8WTT2 800 aaKnown RBP10.25□□□□□ -0.77
RBFOX2-205ENST00000405409 NAP1L2Q9ULW6 460 aaPredicted RBP10.25□□□□□ -0.77
RBFOX2-205ENST00000405409 DEKP35659 375 aaKnown RBP10.24□□□□□ -0.77
RBFOX2-205ENST00000405409 L1TD1Q5T7N2 865 aaKnown RBP10.23□□□□□ -0.77
RBFOX2-205ENST00000405409 CALRP27797 417 aaKnown RBP10.23□□□□□ -0.77
RBFOX2-205ENST00000405409 PRM3Q9NNZ6 103 aa10.22□□□□□ -0.77
RBFOX2-205ENST00000405409 PNNQ9H307 717 aaKnown RBP10.21□□□□□ -0.77
RBFOX2-205ENST00000405409 FTSJ3Q8IY81 847 aaKnown RBP10.21□□□□□ -0.78
RBFOX2-205ENST00000405409 KIAA2012Q0VF49 1180 aa10.2□□□□□ -0.78
RBFOX2-205ENST00000405409 GOLGA6L4A6NEF3 574 aa10.2□□□□□ -0.78
RBFOX2-205ENST00000405409 FGD1P98174 961 aa10.2□□□□□ -0.78
RBFOX2-205ENST00000405409 SENP3-EIF4A1A0A087X0R7 540 aa10.19□□□□□ -0.78
RBFOX2-205ENST00000405409 SPRYD3Q8NCJ5 442 aa10.19□□□□□ -0.78
RBFOX2-205ENST00000405409 C14orf37Q86TY3 774 aa10.19□□□□□ -0.78
RBFOX2-205ENST00000405409 KDM2AQ9Y2K7 1162 aa10.19□□□□□ -0.78
RBFOX2-205ENST00000405409 PDS5BQ9NTI5 1447 aa10.19□□□□□ -0.78
RBFOX2-205ENST00000405409 MIER1Q8N108 512 aa10.19□□□□□ -0.78
RBFOX2-205ENST00000405409 A0A0U1RQG5 324 aaPredicted RBP10.18□□□□□ -0.78
RBFOX2-205ENST00000405409 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.17□□□□□ -0.78
RBFOX2-205ENST00000405409 RGS3P49796 1198 aa10.17□□□□□ -0.78
RBFOX2-205ENST00000405409 GOLGA6L1Q8N7Z2 621 aa10.17□□□□□ -0.78
RBFOX2-205ENST00000405409 HIRIP3Q9BW71 556 aaPredicted RBP10.16□□□□□ -0.78
RBFOX2-205ENST00000405409 HSCBQ8IWL3 235 aa10.16□□□□□ -0.78
RBFOX2-205ENST00000405409 SENP3Q9H4L4 574 aaPredicted RBP10.16□□□□□ -0.78
RBFOX2-205ENST00000405409 SETQ01105 290 aaPredicted RBP10.16□□□□□ -0.78
RBFOX2-205ENST00000405409 KCNJ4P48050 445 aa10.15□□□□□ -0.78
RBFOX2-205ENST00000405409 SUPT16HQ9Y5B9 1047 aaKnown RBP10.15□□□□□ -0.78
RBFOX2-205ENST00000405409 PDE4CQ08493 712 aa10.14□□□□□ -0.79
RBFOX2-205ENST00000405409 OS9Q13438 667 aaPredicted RBP10.13□□□□□ -0.79
RBFOX2-205ENST00000405409 NPHP1O15259 732 aa10.11□□□□□ -0.79
RBFOX2-205ENST00000405409 GNL2Q13823 731 aaKnown RBP10.1□□□□□ -0.79
RBFOX2-205ENST00000405409 PATL2C9JE40 543 aaKnown RBP10.1□□□□□ -0.79
RBFOX2-205ENST00000405409 GOLGA2Q08379 1002 aa10.09□□□□□ -0.79
RBFOX2-205ENST00000405409 CHIC2Q9UKJ5 165 aa10.09□□□□□ -0.79
RBFOX2-205ENST00000405409 GZF1Q9H116 711 aaPredicted RBP10.09□□□□□ -0.79
RBFOX2-205ENST00000405409 FRAT1Q92837 279 aaPredicted RBP10.08□□□□□ -0.8
RBFOX2-205ENST00000405409 MYO15BQ96JP2 1530 aa10.08□□□□□ -0.8
RBFOX2-205ENST00000405409 ISY1Q9ULR0 285 aaKnown RBP10.07□□□□□ -0.8
RBFOX2-205ENST00000405409 PPP4R2Q9NY27 417 aa10.07□□□□□ -0.8
RBFOX2-205ENST00000405409 MCCP23508 829 aa10.07□□□□□ -0.8
RBFOX2-205ENST00000405409 CFAP53Q96M91 514 aa10.06□□□□□ -0.8
RBFOX2-205ENST00000405409 NEUROD2Q15784 382 aa10.06□□□□□ -0.8
RBFOX2-205ENST00000405409 HAP1P54257 671 aaPredicted RBP10.05□□□□□ -0.8
RBFOX2-205ENST00000405409 PTMSP20962 102 aa10.05□□□□□ -0.8
RBFOX2-205ENST00000405409 CHMP7Q8WUX9 453 aaPredicted RBP10.05□□□□□ -0.8
RBFOX2-205ENST00000405409 FBXO3Q9UK99 471 aa10.05□□□□□ -0.8
RBFOX2-205ENST00000405409 TPM4P67936 248 aa10.04□□□□□ -0.8
RBFOX2-205ENST00000405409 HSP90AA2PQ14568 343 aaPredicted RBP10.04□□□□□ -0.8
RBFOX2-205ENST00000405409 ANO8Q9HCE9 1232 aaPredicted RBP10.04□□□□□ -0.8
RBFOX2-205ENST00000405409 B4GALNT3Q6L9W6 998 aa10.03□□□□□ -0.8
RBFOX2-205ENST00000405409 EIF4G2P78344 907 aaKnown RBP eCLIP10.03□□□□□ -0.8
RBFOX2-205ENST00000405409 USP35Q9P2H5 1018 aa10.03□□□□□ -0.8
RBFOX2-205ENST00000405409 VSIG10Q8N0Z9 540 aa10.02□□□□□ -0.81
RBFOX2-205ENST00000405409 MAPK8IP3Q9UPT6 1336 aa10.02□□□□□ -0.81
RBFOX2-205ENST00000405409 GBP4Q96PP9 640 aa10.02□□□□□ -0.81
RBFOX2-205ENST00000405409 HSP90B1P14625 803 aaKnown RBP10□□□□□ -0.81
RBFOX2-205ENST00000405409 ZNF771Q7L3S4 317 aaPredicted RBP10□□□□□ -0.81
RBFOX2-205ENST00000405409 CREBRFQ8IUR6 639 aa10□□□□□ -0.81
RBFOX2-205ENST00000405409 CHMP4BQ9H444 224 aaKnown RBP10□□□□□ -0.81
RBFOX2-205ENST00000405409 GOLGA6L3A6NEY3 463 aa9.99□□□□□ -0.81
RBFOX2-205ENST00000405409 TAF7LQ5H9L4 462 aa9.99□□□□□ -0.81
RBFOX2-205ENST00000405409 SYAP1Q96A49 352 aaPredicted RBP9.98□□□□□ -0.81
RBFOX2-205ENST00000405409 KNSTRNQ9Y448 316 aa9.98□□□□□ -0.81
RBFOX2-205ENST00000405409 PPP1R15AO75807 674 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms