RNA–Protein interactions for RNA: ENST00000405141.5

NCOA1-204, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NCOA1, Length 7,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-204ENST00000405141 SIN3AQ96ST3 1273 aa12.69□□□□□ -0.38
NCOA1-204ENST00000405141 RTN4Q9NQC3 1192 aaKnown RBP12.69□□□□□ -0.38
NCOA1-204ENST00000405141 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.67□□□□□ -0.38
NCOA1-204ENST00000405141 LAS1LQ9Y4W2 734 aaKnown RBP12.66□□□□□ -0.38
NCOA1-204ENST00000405141 GLIPR1L2Q4G1C9 344 aa12.64□□□□□ -0.39
NCOA1-204ENST00000405141 RB1CC1Q8TDY2 1594 aa12.64□□□□□ -0.39
NCOA1-204ENST00000405141 SENP3Q9H4L4 574 aaPredicted RBP12.63□□□□□ -0.39
NCOA1-204ENST00000405141 TNIKQ9UKE5 1360 aa12.63□□□□□ -0.39
NCOA1-204ENST00000405141 DDRGK1Q96HY6 314 aa12.61□□□□□ -0.39
NCOA1-204ENST00000405141 B4GALNT3Q6L9W6 998 aa12.6□□□□□ -0.39
NCOA1-204ENST00000405141 NOP58Q9Y2X3 529 aaKnown RBP12.59□□□□□ -0.39
NCOA1-204ENST00000405141 PPP4R2Q9NY27 417 aa12.58□□□□□ -0.4
NCOA1-204ENST00000405141 WRNQ14191 1432 aaPredicted RBP eCLIP12.58□□□□□ -0.4
NCOA1-204ENST00000405141 EEA1Q15075 1411 aa12.57□□□□□ -0.4
NCOA1-204ENST00000405141 PLPPR3Q6T4P5 718 aa12.56□□□□□ -0.4
NCOA1-204ENST00000405141 STAG3Q9UJ98 1225 aa12.56□□□□□ -0.4
NCOA1-204ENST00000405141 RBM19Q9Y4C8 960 aaKnown RBP12.55□□□□□ -0.4
NCOA1-204ENST00000405141 CEP164Q9UPV0 1460 aa12.55□□□□□ -0.4
NCOA1-204ENST00000405141 RGL3Q3MIN7 710 aa12.54□□□□□ -0.4
NCOA1-204ENST00000405141 SOGA1O94964 1423 aa12.54□□□□□ -0.4
NCOA1-204ENST00000405141 TSPY4P0CV99 314 aa12.53□□□□□ -0.4
NCOA1-204ENST00000405141 TSPY10P0CW01 314 aa12.53□□□□□ -0.4
NCOA1-204ENST00000405141 BECN1Q14457 450 aa12.53□□□□□ -0.4
NCOA1-204ENST00000405141 DEKP35659 375 aaKnown RBP12.51□□□□□ -0.41
NCOA1-204ENST00000405141 RGS3P49796 1198 aa12.5□□□□□ -0.41
NCOA1-204ENST00000405141 NACADO15069 1562 aa12.49□□□□□ -0.41
NCOA1-204ENST00000405141 CARD11Q9BXL7 1154 aa12.49□□□□□ -0.41
NCOA1-204ENST00000405141 TPRNQ4KMQ1 711 aa12.49□□□□□ -0.41
NCOA1-204ENST00000405141 NCLP19338 710 aaKnown RBP12.49□□□□□ -0.41
NCOA1-204ENST00000405141 CC2D1BQ5T0F9 858 aaKnown RBP12.48□□□□□ -0.41
NCOA1-204ENST00000405141 TRIM44Q96DX7 344 aaPredicted RBP12.48□□□□□ -0.41
NCOA1-204ENST00000405141 TSHZ2Q9NRE2 1034 aa12.48□□□□□ -0.41
NCOA1-204ENST00000405141 PPM1GO15355 546 aaPredicted RBP12.47□□□□□ -0.41
NCOA1-204ENST00000405141 MYH16Q9H6N6 1097 aa12.47□□□□□ -0.41
NCOA1-204ENST00000405141 NEUROD2Q15784 382 aa12.46□□□□□ -0.41
NCOA1-204ENST00000405141 CCNB3Q8WWL7 1395 aa12.46□□□□□ -0.42
NCOA1-204ENST00000405141 ABCC8Q09428 1581 aa12.45□□□□□ -0.42
NCOA1-204ENST00000405141 NAP1L5Q96NT1 182 aaPredicted RBP12.44□□□□□ -0.42
NCOA1-204ENST00000405141 CECR2Q9BXF3 1484 aa12.44□□□□□ -0.42
NCOA1-204ENST00000405141 ESF1Q9H501 851 aaKnown RBP12.43□□□□□ -0.42
NCOA1-204ENST00000405141 KNSTRNQ9Y448 316 aa12.43□□□□□ -0.42
NCOA1-204ENST00000405141 KANK4Q5T7N3 995 aaPredicted RBP12.43□□□□□ -0.42
NCOA1-204ENST00000405141 KIF27Q86VH2 1401 aa12.42□□□□□ -0.42
NCOA1-204ENST00000405141 FRAT1Q92837 279 aaPredicted RBP12.42□□□□□ -0.42
NCOA1-204ENST00000405141 HSPA5P11021 654 aaKnown RBP12.42□□□□□ -0.42
NCOA1-204ENST00000405141 CHMP7Q8WUX9 453 aaPredicted RBP12.42□□□□□ -0.42
NCOA1-204ENST00000405141 KCNH8Q96L42 1107 aa12.42□□□□□ -0.42
NCOA1-204ENST00000405141 BAZ1BQ9UIG0 1483 aaKnown RBP12.41□□□□□ -0.42
NCOA1-204ENST00000405141 TNNT2P45379 298 aaPredicted RBP12.4□□□□□ -0.42
NCOA1-204ENST00000405141 SPRYD3Q8NCJ5 442 aa12.4□□□□□ -0.42
NCOA1-204ENST00000405141 CCER2I3L3R5 266 aa12.4□□□□□ -0.42
NCOA1-204ENST00000405141 FTSJ3Q8IY81 847 aaKnown RBP12.4□□□□□ -0.42
NCOA1-204ENST00000405141 PLEKHG5O94827 1062 aa12.39□□□□□ -0.43
NCOA1-204ENST00000405141 ZBTB7CA1YPR0 619 aa12.38□□□□□ -0.43
NCOA1-204ENST00000405141 FOXD1Q16676 465 aa12.38□□□□□ -0.43
NCOA1-204ENST00000405141 CFDP1Q9UEE9 299 aaPredicted RBP12.38□□□□□ -0.43
NCOA1-204ENST00000405141 GOLGA6L22H0YM25 854 aa12.38□□□□□ -0.43
NCOA1-204ENST00000405141 SETD5Q9C0A6 1442 aa12.38□□□□□ -0.43
NCOA1-204ENST00000405141 CCDC88BA6NC98 1476 aa12.36□□□□□ -0.43
NCOA1-204ENST00000405141 PTMAP06454 111 aaKnown RBP12.36□□□□□ -0.43
NCOA1-204ENST00000405141 ERICH6BQ5W0A0 696 aa12.35□□□□□ -0.43
NCOA1-204ENST00000405141 VPS8Q8N3P4 1428 aa12.34□□□□□ -0.43
NCOA1-204ENST00000405141 PLEKHD1A6NEE1 506 aa12.34□□□□□ -0.43
NCOA1-204ENST00000405141 RAB3GAP2Q9H2M9 1393 aa12.33□□□□□ -0.43
NCOA1-204ENST00000405141 WIZO95785 1651 aa12.33□□□□□ -0.44
NCOA1-204ENST00000405141 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.33□□□□□ -0.44
NCOA1-204ENST00000405141 CFAP53Q96M91 514 aa12.33□□□□□ -0.44
NCOA1-204ENST00000405141 DNTTIP2Q5QJE6 756 aaKnown RBP12.33□□□□□ -0.44
NCOA1-204ENST00000405141 NPM1P06748 294 aaKnown RBP eCLIP12.32□□□□□ -0.44
NCOA1-204ENST00000405141 DCAF11Q8TEB1 546 aa12.32□□□□□ -0.44
NCOA1-204ENST00000405141 HSP90AB1P08238 724 aaKnown RBP12.31□□□□□ -0.44
NCOA1-204ENST00000405141 EIF4G1Q04637 1599 aaKnown RBP12.3□□□□□ -0.44
NCOA1-204ENST00000405141 BAZ1AQ9NRL2 1556 aaPredicted RBP12.3□□□□□ -0.44
NCOA1-204ENST00000405141 ARID4BQ4LE39 1312 aaPredicted RBP12.3□□□□□ -0.44
NCOA1-204ENST00000405141 MROH2BQ7Z745 1585 aa12.3□□□□□ -0.44
NCOA1-204ENST00000405141 CASC1Q6TDU7 716 aa12.29□□□□□ -0.44
NCOA1-204ENST00000405141 C14orf37Q86TY3 774 aa12.29□□□□□ -0.44
NCOA1-204ENST00000405141 ARHGAP35Q9NRY4 1499 aa12.28□□□□□ -0.44
NCOA1-204ENST00000405141 CDCA8Q53HL2 280 aa12.28□□□□□ -0.44
NCOA1-204ENST00000405141 PLCB2Q00722 1185 aa12.27□□□□□ -0.44
NCOA1-204ENST00000405141 MAPK8IP3Q9UPT6 1336 aa12.27□□□□□ -0.44
NCOA1-204ENST00000405141 CUX2O14529 1486 aa12.26□□□□□ -0.45
NCOA1-204ENST00000405141 FHAD1B1AJZ9 1412 aa12.25□□□□□ -0.45
NCOA1-204ENST00000405141 U2SURPO15042 1029 aaKnown RBP12.25□□□□□ -0.45
NCOA1-204ENST00000405141 CARMIL1Q5VZK9 1371 aa12.25□□□□□ -0.45
NCOA1-204ENST00000405141 PPP1R15AO75807 674 aaPredicted RBP12.25□□□□□ -0.45
NCOA1-204ENST00000405141 TIMELESSQ9UNS1 1208 aa12.24□□□□□ -0.45
NCOA1-204ENST00000405141 TMF1P82094 1093 aa12.24□□□□□ -0.45
NCOA1-204ENST00000405141 HSCBQ8IWL3 235 aa12.24□□□□□ -0.45
NCOA1-204ENST00000405141 RCAN3Q9UKA8 241 aa12.24□□□□□ -0.45
NCOA1-204ENST00000405141 GZF1Q9H116 711 aaPredicted RBP12.23□□□□□ -0.45
NCOA1-204ENST00000405141 TAOK2Q9UL54 1235 aa12.23□□□□□ -0.45
NCOA1-204ENST00000405141 IPO9Q96P70 1041 aaKnown RBP12.22□□□□□ -0.45
NCOA1-204ENST00000405141 SLKQ9H2G2 1235 aaPredicted RBP12.22□□□□□ -0.45
NCOA1-204ENST00000405141 KTN1Q86UP2 1357 aaKnown RBP12.2□□□□□ -0.46
NCOA1-204ENST00000405141 L1TD1Q5T7N2 865 aaKnown RBP12.2□□□□□ -0.46
NCOA1-204ENST00000405141 PKD2Q13563 968 aa12.2□□□□□ -0.46
NCOA1-204ENST00000405141 A0A0G2JS52 829 aa12.19□□□□□ -0.46
NCOA1-204ENST00000405141 MPHOSPH9Q99550 1183 aa12.19□□□□□ -0.46
NCOA1-204ENST00000405141 NUDCQ9Y266 331 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms