RNA–Protein interactions for RNA: ENST00000404933.6

SMS-202, Transcript of spermine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMS, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMS-202ENST00000404933 GRIN2BQ13224 1484 aa18.18■□□□□ 0.5
SMS-202ENST00000404933 EFCAB5A4FU69 1503 aa18.17■□□□□ 0.5
SMS-202ENST00000404933 FHAD1B1AJZ9 1412 aa18.16■□□□□ 0.5
SMS-202ENST00000404933 ADAMTS12P58397 1594 aa18.15■□□□□ 0.5
SMS-202ENST00000404933 ZNF608Q9ULD9 1512 aaPredicted RBP18.13■□□□□ 0.49
SMS-202ENST00000404933 EIF4G3O43432 1585 aaKnown RBP18.1■□□□□ 0.49
SMS-202ENST00000404933 MAP3K1Q13233 1512 aa18.07■□□□□ 0.48
SMS-202ENST00000404933 SAMD9Q5K651 1589 aa18.05■□□□□ 0.48
SMS-202ENST00000404933 FHOD3Q2V2M9 1422 aa18.04■□□□□ 0.48
SMS-202ENST00000404933 ZEB1P37275 1124 aaPredicted RBP18.02■□□□□ 0.48
SMS-202ENST00000404933 P3H3Q8IVL6 736 aa18.02■□□□□ 0.48
SMS-202ENST00000404933 SNAPC4Q5SXM2 1469 aa18.02■□□□□ 0.48
SMS-202ENST00000404933 TIAM1Q13009 1591 aa18.02■□□□□ 0.48
SMS-202ENST00000404933 PCF11O94913 1555 aaKnown RBP18.01■□□□□ 0.47
SMS-202ENST00000404933 KANK4Q5T7N3 995 aaPredicted RBP18■□□□□ 0.47
SMS-202ENST00000404933 FMN1Q68DA7 1419 aa18■□□□□ 0.47
SMS-202ENST00000404933 MAGI1Q96QZ7 1491 aaPredicted RBP18■□□□□ 0.47
SMS-202ENST00000404933 IQGAP2Q13576 1575 aa18■□□□□ 0.47
SMS-202ENST00000404933 FYCO1Q9BQS8 1478 aa18■□□□□ 0.47
SMS-202ENST00000404933 CFAP43Q8NDM7 1665 aa17.98■□□□□ 0.47
SMS-202ENST00000404933 CASKIN1Q8WXD9 1431 aa17.98■□□□□ 0.47
SMS-202ENST00000404933 GRIN2AQ12879 1464 aa17.95■□□□□ 0.46
SMS-202ENST00000404933 SYNJ2O15056 1496 aa17.92■□□□□ 0.46
SMS-202ENST00000404933 LRRC9Q6ZRR7 1453 aa17.92■□□□□ 0.46
SMS-202ENST00000404933 KIAA0586Q9BVV6 1533 aa17.92■□□□□ 0.46
SMS-202ENST00000404933 UGGT2Q9NYU1 1516 aa17.91■□□□□ 0.46
SMS-202ENST00000404933 ATP1B4Q9UN42 357 aaPredicted RBP17.89■□□□□ 0.45
SMS-202ENST00000404933 RRBP1Q9P2E9 1410 aaKnown RBP17.89■□□□□ 0.45
SMS-202ENST00000404933 CHMP7Q8WUX9 453 aaPredicted RBP17.88■□□□□ 0.45
SMS-202ENST00000404933 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.87■□□□□ 0.45
SMS-202ENST00000404933 CCER1Q8TC90 406 aaPredicted RBP17.86■□□□□ 0.45
SMS-202ENST00000404933 HNRNPUL2Q1KMD3 747 aaKnown RBP17.86■□□□□ 0.45
SMS-202ENST00000404933 CEP170Q5SW79 1584 aa17.83■□□□□ 0.44
SMS-202ENST00000404933 CCNB3Q8WWL7 1395 aa17.82■□□□□ 0.44
SMS-202ENST00000404933 LRRIQ1Q96JM4 1722 aa17.82■□□□□ 0.44
SMS-202ENST00000404933 KIAA0556O60303 1618 aa17.81■□□□□ 0.44
SMS-202ENST00000404933 NUP160Q12769 1436 aa17.8■□□□□ 0.44
SMS-202ENST00000404933 HECW1Q76N89 1606 aa17.8■□□□□ 0.44
SMS-202ENST00000404933 FBLN2P98095 1184 aa17.79■□□□□ 0.44
SMS-202ENST00000404933 DISP1Q96F81 1524 aa17.79■□□□□ 0.44
SMS-202ENST00000404933 CCDC18Q5T9S5 1454 aa17.78■□□□□ 0.44
SMS-202ENST00000404933 PHLDB1Q86UU1 1377 aa17.76■□□□□ 0.43
SMS-202ENST00000404933 MTUS2Q5JR59 1369 aa17.75■□□□□ 0.43
SMS-202ENST00000404933 EHBP1L1Q8N3D4 1523 aa17.73■□□□□ 0.43
SMS-202ENST00000404933 CARMIL2Q6F5E8 1435 aa17.7■□□□□ 0.42
SMS-202ENST00000404933 SUPT6HQ7KZ85 1726 aaKnown RBP17.7■□□□□ 0.42
SMS-202ENST00000404933 EPRSP07814 1512 aaKnown RBP17.7■□□□□ 0.42
SMS-202ENST00000404933 JPH4Q96JJ6 628 aa17.69■□□□□ 0.42
SMS-202ENST00000404933 CHD1O14646 1710 aa17.69■□□□□ 0.42
SMS-202ENST00000404933 RAPGEF6Q8TEU7 1601 aa17.67■□□□□ 0.42
SMS-202ENST00000404933 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.67■□□□□ 0.42
SMS-202ENST00000404933 NCOA2Q15596 1464 aa17.65■□□□□ 0.42
SMS-202ENST00000404933 PELP1Q8IZL8 1130 aaKnown RBP17.65■□□□□ 0.42
SMS-202ENST00000404933 MAGI3Q5TCQ9 1506 aa17.64■□□□□ 0.41
SMS-202ENST00000404933 CDK13Q14004 1512 aaKnown RBP17.63■□□□□ 0.41
SMS-202ENST00000404933 FGD6Q6ZV73 1430 aa17.63■□□□□ 0.41
SMS-202ENST00000404933 FAM50AQ14320 339 aaKnown RBP17.63■□□□□ 0.41
SMS-202ENST00000404933 ARHGEF11O15085 1522 aa17.62■□□□□ 0.41
SMS-202ENST00000404933 NUP153P49790 1475 aaKnown RBP17.62■□□□□ 0.41
SMS-202ENST00000404933 ITGAEP38570 1179 aa17.61■□□□□ 0.41
SMS-202ENST00000404933 MYOM3Q5VTT5 1437 aa17.61■□□□□ 0.41
SMS-202ENST00000404933 CDK11AQ9UQ88 783 aaPredicted RBP17.56■□□□□ 0.4
SMS-202ENST00000404933 PLB1Q6P1J6 1458 aa17.56■□□□□ 0.4
SMS-202ENST00000404933 CLSPNQ9HAW4 1339 aa17.55■□□□□ 0.4
SMS-202ENST00000404933 SHROOM2Q13796 1616 aa17.55■□□□□ 0.4
SMS-202ENST00000404933 PRG4Q92954 1404 aaPredicted RBP17.55■□□□□ 0.4
SMS-202ENST00000404933 DHX57Q6P158 1386 aaKnown RBP17.54■□□□□ 0.4
SMS-202ENST00000404933 ARID3CA6NKF2 412 aa17.54■□□□□ 0.4
SMS-202ENST00000404933 PTPN23Q9H3S7 1636 aa17.54■□□□□ 0.4
SMS-202ENST00000404933 SETD5Q9C0A6 1442 aa17.53■□□□□ 0.4
SMS-202ENST00000404933 ABCA8O94911 1581 aa17.53■□□□□ 0.4
SMS-202ENST00000404933 RAB3GAP2Q9H2M9 1393 aa17.51■□□□□ 0.39
SMS-202ENST00000404933 TCOF1Q13428 1488 aaKnown RBP17.5■□□□□ 0.39
SMS-202ENST00000404933 MIA2Q96PC5 1412 aa17.5■□□□□ 0.39
SMS-202ENST00000404933 PTPRGP23470 1445 aa17.48■□□□□ 0.39
SMS-202ENST00000404933 TROQ12816 1431 aaPredicted RBP17.48■□□□□ 0.39
SMS-202ENST00000404933 ADCY10Q96PN6 1610 aa17.45■□□□□ 0.38
SMS-202ENST00000404933 CLASP1Q7Z460 1538 aa17.45■□□□□ 0.38
SMS-202ENST00000404933 ATP10BO94823 1461 aa17.42■□□□□ 0.38
SMS-202ENST00000404933 PTPRKQ15262 1439 aa17.42■□□□□ 0.38
SMS-202ENST00000404933 ITSN2Q9NZM3 1697 aa17.41■□□□□ 0.38
SMS-202ENST00000404933 HFM1A2PYH4 1435 aa17.41■□□□□ 0.38
SMS-202ENST00000404933 PLEKHD1A6NEE1 506 aa17.39■□□□□ 0.37
SMS-202ENST00000404933 UACAQ9BZF9 1416 aa17.38■□□□□ 0.37
SMS-202ENST00000404933 KIF14Q15058 1648 aa17.38■□□□□ 0.37
SMS-202ENST00000404933 ERCC6L2Q5T890 1561 aa17.37■□□□□ 0.37
SMS-202ENST00000404933 NAIPQ13075 1403 aa17.35■□□□□ 0.37
SMS-202ENST00000404933 AKNAQ7Z591 1439 aa17.35■□□□□ 0.37
SMS-202ENST00000404933 GCC2Q8IWJ2 1684 aa17.34■□□□□ 0.37
SMS-202ENST00000404933 MAPKBP1O60336 1514 aa17.34■□□□□ 0.37
SMS-202ENST00000404933 GPATCH8Q9UKJ3 1502 aaKnown RBP17.34■□□□□ 0.37
SMS-202ENST00000404933 DNMT1P26358 1616 aaKnown RBP17.33■□□□□ 0.37
SMS-202ENST00000404933 ABCC2Q92887 1545 aa17.32■□□□□ 0.36
SMS-202ENST00000404933 CFDP1Q9UEE9 299 aaPredicted RBP17.31■□□□□ 0.36
SMS-202ENST00000404933 CDC42BPAQ5VT25 1732 aa17.3■□□□□ 0.36
SMS-202ENST00000404933 DAPK1P53355 1430 aa17.3■□□□□ 0.36
SMS-202ENST00000404933 ABCC10Q5T3U5 1492 aa17.3■□□□□ 0.36
SMS-202ENST00000404933 CAMSAP2Q08AD1 1489 aa17.3■□□□□ 0.36
SMS-202ENST00000404933 ROCK1Q13464 1354 aa17.28■□□□□ 0.36
SMS-202ENST00000404933 CHIC2Q9UKJ5 165 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms