RNA–Protein interactions for RNA: ENST00000401874.6

TSC2-204, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSC2, Length 5,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-204ENST00000401874 EIF5BO60841 1220 aaKnown RBP22.29■■□□□ 1.16
TSC2-204ENST00000401874 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.27■■□□□ 1.163e-6■■■□□ 15.2
TSC2-204ENST00000401874 KDM2AQ9Y2K7 1162 aa22.26■■□□□ 1.15
TSC2-204ENST00000401874 NACADO15069 1562 aa22.25■■□□□ 1.15
TSC2-204ENST00000401874 RRP7BPQ9NSQ0 103 aa22.24■■□□□ 1.15
TSC2-204ENST00000401874 STAG3Q9UJ98 1225 aa22.21■■□□□ 1.15
TSC2-204ENST00000401874 KIF27Q86VH2 1401 aa22.21■■□□□ 1.15
TSC2-204ENST00000401874 ESF1Q9H501 851 aaKnown RBP22.19■■□□□ 1.14
TSC2-204ENST00000401874 DDRGK1Q96HY6 314 aa22.18■■□□□ 1.14
TSC2-204ENST00000401874 BAZ1BQ9UIG0 1483 aaKnown RBP22.15■■□□□ 1.14
TSC2-204ENST00000401874 ANP32EQ9BTT0 268 aa22.14■■□□□ 1.14
TSC2-204ENST00000401874 NPM1P06748 294 aaKnown RBP eCLIP22.13■■□□□ 1.13
TSC2-204ENST00000401874 GLIPR1L2Q4G1C9 344 aa22.13■■□□□ 1.13
TSC2-204ENST00000401874 BAZ1AQ9NRL2 1556 aaPredicted RBP22.1■■□□□ 1.13
TSC2-204ENST00000401874 CHMP7Q8WUX9 453 aaPredicted RBP22.09■■□□□ 1.13
TSC2-204ENST00000401874 SUPT16HQ9Y5B9 1047 aaKnown RBP22.08■■□□□ 1.12
TSC2-204ENST00000401874 BECN1Q14457 450 aa22.06■■□□□ 1.12
TSC2-204ENST00000401874 PPP4R2Q9NY27 417 aa22.03■■□□□ 1.12
TSC2-204ENST00000401874 MYH16Q9H6N6 1097 aa22.02■■□□□ 1.12
TSC2-204ENST00000401874 CCNB3Q8WWL7 1395 aa22.02■■□□□ 1.12
TSC2-204ENST00000401874 PLEKHD1A6NEE1 506 aa22.01■■□□□ 1.11
TSC2-204ENST00000401874 TIMELESSQ9UNS1 1208 aa22■■□□□ 1.11
TSC2-204ENST00000401874 CDCA8Q53HL2 280 aa21.99■■□□□ 1.11
TSC2-204ENST00000401874 SIN3AQ96ST3 1273 aa21.99■■□□□ 1.11
TSC2-204ENST00000401874 FHAD1B1AJZ9 1412 aa21.97■■□□□ 1.11
TSC2-204ENST00000401874 ARXQ96QS3 562 aa21.96■■□□□ 1.11
TSC2-204ENST00000401874 CARD11Q9BXL7 1154 aa21.95■■□□□ 1.1
TSC2-204ENST00000401874 CFDP1Q9UEE9 299 aaPredicted RBP21.95■■□□□ 1.1
TSC2-204ENST00000401874 PPM1GO15355 546 aaPredicted RBP21.93■■□□□ 1.1
TSC2-204ENST00000401874 KNSTRNQ9Y448 316 aa21.92■■□□□ 1.1
TSC2-204ENST00000401874 SOGA1O94964 1423 aa21.92■■□□□ 1.1
TSC2-204ENST00000401874 CECR2Q9BXF3 1484 aa21.91■■□□□ 1.1
TSC2-204ENST00000401874 CCER2I3L3R5 266 aa21.91■■□□□ 1.1
TSC2-204ENST00000401874 VPS8Q8N3P4 1428 aa21.9■■□□□ 1.1
TSC2-204ENST00000401874 RGL3Q3MIN7 710 aa21.89■■□□□ 1.1
TSC2-204ENST00000401874 CFAP53Q96M91 514 aa21.89■■□□□ 1.1
TSC2-204ENST00000401874 GOLGA6L22H0YM25 854 aa21.84■■□□□ 1.09
TSC2-204ENST00000401874 SETD5Q9C0A6 1442 aa21.83■■□□□ 1.09
TSC2-204ENST00000401874 NOP58Q9Y2X3 529 aaKnown RBP21.83■■□□□ 1.09
TSC2-204ENST00000401874 TRIM44Q96DX7 344 aaPredicted RBP21.81■■□□□ 1.08
TSC2-204ENST00000401874 KCNH8Q96L42 1107 aa21.79■■□□□ 1.08
TSC2-204ENST00000401874 CARMIL1Q5VZK9 1371 aa21.78■■□□□ 1.08
TSC2-204ENST00000401874 NCLP19338 710 aaKnown RBP21.77■■□□□ 1.08
TSC2-204ENST00000401874 SENP3-EIF4A1A0A087X0R7 540 aa21.76■■□□□ 1.07
TSC2-204ENST00000401874 FTSJ3Q8IY81 847 aaKnown RBP21.74■■□□□ 1.07
TSC2-204ENST00000401874 CUX2O14529 1486 aa21.74■■□□□ 1.07
TSC2-204ENST00000401874 ARHGAP35Q9NRY4 1499 aa21.73■■□□□ 1.07
TSC2-204ENST00000401874 B4GALNT3Q6L9W6 998 aa21.72■■□□□ 1.07
TSC2-204ENST00000401874 CCDC88BA6NC98 1476 aa21.72■■□□□ 1.07
TSC2-204ENST00000401874 MROH2BQ7Z745 1585 aa21.71■■□□□ 1.07
TSC2-204ENST00000401874 ERICH6BQ5W0A0 696 aa21.7■■□□□ 1.07
TSC2-204ENST00000401874 PLPPR3Q6T4P5 718 aa21.69■■□□□ 1.06
TSC2-204ENST00000401874 PPP1R15AO75807 674 aaPredicted RBP21.69■■□□□ 1.06
TSC2-204ENST00000401874 CASC1Q6TDU7 716 aa21.69■■□□□ 1.06
TSC2-204ENST00000401874 LAS1LQ9Y4W2 734 aaKnown RBP21.69■■□□□ 1.06
TSC2-204ENST00000401874 ABCC8Q09428 1581 aa21.69■■□□□ 1.06
TSC2-204ENST00000401874 NUDCQ9Y266 331 aa21.67■■□□□ 1.06
TSC2-204ENST00000401874 MAPK8IP3Q9UPT6 1336 aa21.67■■□□□ 1.06
TSC2-204ENST00000401874 HSPA5P11021 654 aaKnown RBP21.66■■□□□ 1.06
TSC2-204ENST00000401874 MS4A1P11836 297 aa21.66■■□□□ 1.06
TSC2-204ENST00000401874 RGS3P49796 1198 aa21.66■■□□□ 1.06
TSC2-204ENST00000401874 TMF1P82094 1093 aa21.65■■□□□ 1.06
TSC2-204ENST00000401874 CC2D1BQ5T0F9 858 aaKnown RBP21.65■■□□□ 1.06
TSC2-204ENST00000401874 RBM19Q9Y4C8 960 aaKnown RBP21.64■■□□□ 1.06
TSC2-204ENST00000401874 CHMP4BQ9H444 224 aaKnown RBP21.64■■□□□ 1.05
TSC2-204ENST00000401874 KANK4Q5T7N3 995 aaPredicted RBP21.64■■□□□ 1.05
TSC2-204ENST00000401874 RAB3GAP2Q9H2M9 1393 aa21.62■■□□□ 1.05
TSC2-204ENST00000401874 NEUROD2Q15784 382 aa21.62■■□□□ 1.05
TSC2-204ENST00000401874 DCAF11Q8TEB1 546 aa21.6■■□□□ 1.05
TSC2-204ENST00000401874 FRAT1Q92837 279 aaPredicted RBP21.59■■□□□ 1.05
TSC2-204ENST00000401874 EIF4G1Q04637 1599 aaKnown RBP21.59■■□□□ 1.05
TSC2-204ENST00000401874 PTMAP06454 111 aaKnown RBP21.55■■□□□ 1.04
TSC2-204ENST00000401874 PNNQ9H307 717 aaKnown RBP21.54■■□□□ 1.04
TSC2-204ENST00000401874 TOP2AP11388 1531 aaKnown RBP21.53■■□□□ 1.04
TSC2-204ENST00000401874 SENP3Q9H4L4 574 aaPredicted RBP21.53■■□□□ 1.04
TSC2-204ENST00000401874 KTN1Q86UP2 1357 aaKnown RBP21.52■■□□□ 1.04
TSC2-204ENST00000401874 SMARCA2P51531 1590 aa21.52■■□□□ 1.04
TSC2-204ENST00000401874 FMN1Q68DA7 1419 aa21.51■■□□□ 1.03
TSC2-204ENST00000401874 C14orf37Q86TY3 774 aa21.5■■□□□ 1.03
TSC2-204ENST00000401874 HSP90AB1P08238 724 aaKnown RBP21.49■■□□□ 1.03
TSC2-204ENST00000401874 POGKQ9P215 609 aa21.49■■□□□ 1.03
TSC2-204ENST00000401874 KANK1Q14678 1352 aa21.49■■□□□ 1.03
TSC2-204ENST00000401874 DEKP35659 375 aaKnown RBP21.48■■□□□ 1.03
TSC2-204ENST00000401874 ZBTB7CA1YPR0 619 aa21.48■■□□□ 1.03
TSC2-204ENST00000401874 RALBP1Q15311 655 aa21.47■■□□□ 1.03
TSC2-204ENST00000401874 TNNT2P45379 298 aaPredicted RBP21.46■■□□□ 1.03
TSC2-204ENST00000401874 PKD2Q13563 968 aa21.46■■□□□ 1.03
TSC2-204ENST00000401874 MPHOSPH9Q99550 1183 aa21.45■■□□□ 1.02
TSC2-204ENST00000401874 NAP1L5Q96NT1 182 aaPredicted RBP21.45■■□□□ 1.02
TSC2-204ENST00000401874 U2SURPO15042 1029 aaKnown RBP21.44■■□□□ 1.02
TSC2-204ENST00000401874 HSCBQ8IWL3 235 aa21.44■■□□□ 1.02
TSC2-204ENST00000401874 TSHZ2Q9NRE2 1034 aa21.44■■□□□ 1.02
TSC2-204ENST00000401874 ZRSR1Q15695 479 aaKnown RBP21.43■■□□□ 1.02
TSC2-204ENST00000401874 RTN4Q9NQC3 1192 aaKnown RBP21.43■■□□□ 1.02
TSC2-204ENST00000401874 L1TD1Q5T7N2 865 aaKnown RBP21.43■■□□□ 1.02
TSC2-204ENST00000401874 DNTTIP2Q5QJE6 756 aaKnown RBP21.42■■□□□ 1.02
TSC2-204ENST00000401874 TCERG1O14776 1098 aaKnown RBP21.42■■□□□ 1.02
TSC2-204ENST00000401874 RCAN3Q9UKA8 241 aa21.42■■□□□ 1.02
TSC2-204ENST00000401874 WIZO95785 1651 aa21.42■■□□□ 1.02
TSC2-204ENST00000401874 ERCC6Q03468 1493 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms