RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 ERCC6Q03468 1493 aa6.58□□□□□ -1.36
CLHC1-201ENST00000401408 THOC2Q8NI27 1593 aaKnown RBP6.57□□□□□ -1.36
CLHC1-201ENST00000401408 NCAPD3P42695 1498 aa6.54□□□□□ -1.36
CLHC1-201ENST00000401408 NPM2Q86SE8 214 aaKnown RBP6.54□□□□□ -1.36
CLHC1-201ENST00000401408 ZBTB22O15209 634 aa6.51□□□□□ -1.37
CLHC1-201ENST00000401408 TMEM132AQ24JP5 1023 aa6.51□□□□□ -1.37
CLHC1-201ENST00000401408 VSIG10Q8N0Z9 540 aa6.5□□□□□ -1.37
CLHC1-201ENST00000401408 NESP48681 1621 aa6.5□□□□□ -1.37
CLHC1-201ENST00000401408 C14orf37Q86TY3 774 aa6.49□□□□□ -1.37
CLHC1-201ENST00000401408 LCE2DQ5TA82 110 aaPredicted RBP6.48□□□□□ -1.37
CLHC1-201ENST00000401408 HMGXB3Q12766 1538 aa6.46□□□□□ -1.38
CLHC1-201ENST00000401408 POTEB2H3BUK9 544 aa6.46□□□□□ -1.38
CLHC1-201ENST00000401408 PRKAR2AP13861 404 aaKnown RBP6.45□□□□□ -1.38
CLHC1-201ENST00000401408 FBXO3Q9UK99 471 aa6.45□□□□□ -1.38
CLHC1-201ENST00000401408 ATAD2BQ9ULI0 1458 aa6.44□□□□□ -1.38
CLHC1-201ENST00000401408 KIF21AQ7Z4S6 1674 aa6.44□□□□□ -1.38
CLHC1-201ENST00000401408 LAMC3Q9Y6N6 1575 aa6.43□□□□□ -1.38
CLHC1-201ENST00000401408 FKBP8Q14318 412 aa6.43□□□□□ -1.38
CLHC1-201ENST00000401408 BAZ1AQ9NRL2 1556 aaPredicted RBP6.42□□□□□ -1.38
CLHC1-201ENST00000401408 POLA2Q14181 598 aa6.41□□□□□ -1.38
CLHC1-201ENST00000401408 CDAN1Q8IWY9 1227 aa6.39□□□□□ -1.39
CLHC1-201ENST00000401408 DCBLD2Q96PD2 775 aa6.39□□□□□ -1.39
CLHC1-201ENST00000401408 RIMBP3CA6NJZ7 1639 aa6.39□□□□□ -1.39
CLHC1-201ENST00000401408 RIMBP3BA6NNM3 1639 aa6.39□□□□□ -1.39
CLHC1-201ENST00000401408 RIMBP3Q9UFD9 1639 aa6.39□□□□□ -1.39
CLHC1-201ENST00000401408 SMARCA2P51531 1590 aa6.39□□□□□ -1.39
CLHC1-201ENST00000401408 WDR62O43379 1518 aa6.38□□□□□ -1.39
CLHC1-201ENST00000401408 FAM163AQ96GL9 167 aaPredicted RBP6.38□□□□□ -1.39
CLHC1-201ENST00000401408 KDM2AQ9Y2K7 1162 aa6.37□□□□□ -1.39
CLHC1-201ENST00000401408 TRIM26Q12899 539 aaPredicted RBP6.37□□□□□ -1.39
CLHC1-201ENST00000401408 MMRN1Q13201 1228 aa6.36□□□□□ -1.39
CLHC1-201ENST00000401408 OSCARQ8IYS5 282 aa6.35□□□□□ -1.39
CLHC1-201ENST00000401408 PEG3Q9GZU2 1588 aa6.35□□□□□ -1.39
CLHC1-201ENST00000401408 PDS5BQ9NTI5 1447 aa6.35□□□□□ -1.39
CLHC1-201ENST00000401408 SMARCA4P51532 1647 aa6.34□□□□□ -1.39
CLHC1-201ENST00000401408 SUPT5HO00267 1087 aaKnown RBP6.34□□□□□ -1.39
CLHC1-201ENST00000401408 MRC2Q9UBG0 1479 aa6.34□□□□□ -1.4
CLHC1-201ENST00000401408 ARHGEF11O15085 1522 aa6.32□□□□□ -1.4
CLHC1-201ENST00000401408 FBLN2P98095 1184 aa6.31□□□□□ -1.4
CLHC1-201ENST00000401408 NPM3O75607 178 aaKnown RBP6.3□□□□□ -1.4
CLHC1-201ENST00000401408 BAZ1BQ9UIG0 1483 aaKnown RBP6.3□□□□□ -1.4
CLHC1-201ENST00000401408 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.29□□□□□ -1.4
CLHC1-201ENST00000401408 HNRNPUL2Q1KMD3 747 aaKnown RBP6.29□□□□□ -1.4
CLHC1-201ENST00000401408 PLEKHG5O94827 1062 aa6.28□□□□□ -1.4
CLHC1-201ENST00000401408 UBTFP17480 764 aaKnown RBP6.27□□□□□ -1.4
CLHC1-201ENST00000401408 CADPSQ9ULU8 1353 aa6.27□□□□□ -1.41
CLHC1-201ENST00000401408 HRCP23327 699 aa6.26□□□□□ -1.41
CLHC1-201ENST00000401408 CLCN6P51797 869 aa6.25□□□□□ -1.41
CLHC1-201ENST00000401408 SPNS2Q8IVW8 549 aa6.25□□□□□ -1.41
CLHC1-201ENST00000401408 ARAP1Q96P48 1450 aa6.24□□□□□ -1.41
CLHC1-201ENST00000401408 LOC105371045A0A1W2PR82 267 aa6.23□□□□□ -1.41
CLHC1-201ENST00000401408 SAMD1Q6SPF0 538 aaPredicted RBP6.22□□□□□ -1.41
CLHC1-201ENST00000401408 CEP164Q9UPV0 1460 aa6.21□□□□□ -1.42
CLHC1-201ENST00000401408 URB2Q14146 1524 aaKnown RBP6.19□□□□□ -1.42
CLHC1-201ENST00000401408 CYB5RLQ6IPT4 315 aa6.19□□□□□ -1.42
CLHC1-201ENST00000401408 SLC4A2P04920 1241 aa6.18□□□□□ -1.42
CLHC1-201ENST00000401408 NBR1Q14596 966 aa6.18□□□□□ -1.42
CLHC1-201ENST00000401408 FOXD4L1Q9NU39 408 aa6.18□□□□□ -1.42
CLHC1-201ENST00000401408 FANCD2Q9BXW9 1451 aa6.18□□□□□ -1.42
CLHC1-201ENST00000401408 RSF1Q96T23 1441 aaPredicted RBP6.17□□□□□ -1.42
CLHC1-201ENST00000401408 POTEJP0CG39 1038 aa6.17□□□□□ -1.42
CLHC1-201ENST00000401408 CD44P16070 742 aaKnown RBP6.17□□□□□ -1.42
CLHC1-201ENST00000401408 MROH2BQ7Z745 1585 aa6.17□□□□□ -1.42
CLHC1-201ENST00000401408 ILDR1Q86SU0 546 aaPredicted RBP6.17□□□□□ -1.42
CLHC1-201ENST00000401408 ZNF608Q9ULD9 1512 aaPredicted RBP6.16□□□□□ -1.42
CLHC1-201ENST00000401408 CFTRP13569 1480 aa6.16□□□□□ -1.42
CLHC1-201ENST00000401408 CHADLQ6NUI6 762 aa6.15□□□□□ -1.42
CLHC1-201ENST00000401408 CHD1O14646 1710 aa6.15□□□□□ -1.42
CLHC1-201ENST00000401408 CDK11BP21127 795 aaKnown RBP6.13□□□□□ -1.43
CLHC1-201ENST00000401408 CDK11AQ9UQ88 783 aaPredicted RBP6.13□□□□□ -1.43
CLHC1-201ENST00000401408 CLEC11AQ9Y240 323 aa6.13□□□□□ -1.43
CLHC1-201ENST00000401408 PAXIP1Q6ZW49 1069 aaPredicted RBP6.13□□□□□ -1.43
CLHC1-201ENST00000401408 MAMSTRQ6ZN01 415 aa6.12□□□□□ -1.43
CLHC1-201ENST00000401408 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.12□□□□□ -1.43
CLHC1-201ENST00000401408 ZBTB12Q9Y330 459 aaPredicted RBP6.12□□□□□ -1.43
CLHC1-201ENST00000401408 EIF4G3O43432 1585 aaKnown RBP6.12□□□□□ -1.43
CLHC1-201ENST00000401408 IFT140Q96RY7 1462 aa6.12□□□□□ -1.43
CLHC1-201ENST00000401408 CFAP44Q96MT7 982 aa6.11□□□□□ -1.43
CLHC1-201ENST00000401408 CLASP1Q7Z460 1538 aa6.1□□□□□ -1.43
CLHC1-201ENST00000401408 CCDC9Q9Y3X0 531 aaKnown RBP6.1□□□□□ -1.43
CLHC1-201ENST00000401408 PRDM2Q13029 1718 aa6.1□□□□□ -1.43
CLHC1-201ENST00000401408 PDIA4P13667 645 aaKnown RBP6.1□□□□□ -1.43
CLHC1-201ENST00000401408 CHMP4AQ9BY43 222 aa6.09□□□□□ -1.44
CLHC1-201ENST00000401408 TARBP1Q13395 1621 aaKnown RBP6.08□□□□□ -1.44
CLHC1-201ENST00000401408 HMGB1P09429 215 aaKnown RBP6.08□□□□□ -1.44
CLHC1-201ENST00000401408 WIZO95785 1651 aa6.07□□□□□ -1.44
CLHC1-201ENST00000401408 TSHZ2Q9NRE2 1034 aa6.06□□□□□ -1.44
CLHC1-201ENST00000401408 BBXQ8WY36 941 aaPredicted RBP6.06□□□□□ -1.44
CLHC1-201ENST00000401408 KIF13AQ9H1H9 1805 aa6.05□□□□□ -1.44
CLHC1-201ENST00000401408 TOPBP1Q92547 1522 aa6.05□□□□□ -1.44
CLHC1-201ENST00000401408 GALR2O43603 387 aaPredicted RBP6.05□□□□□ -1.44
CLHC1-201ENST00000401408 HSP90B1P14625 803 aaKnown RBP6.04□□□□□ -1.44
CLHC1-201ENST00000401408 SPDYE1Q8NFV5 336 aaPredicted RBP6.04□□□□□ -1.44
CLHC1-201ENST00000401408 IGSF3O75054 1194 aa6.03□□□□□ -1.44
CLHC1-201ENST00000401408 AQRO60306 1485 aaKnown RBP eCLIP6.03□□□□□ -1.44
CLHC1-201ENST00000401408 SCUBE2Q9NQ36 999 aa6.02□□□□□ -1.45
CLHC1-201ENST00000401408 KDM4FA0A1W2PPD8 638 aa6.02□□□□□ -1.45
CLHC1-201ENST00000401408 UBE2Q2Q8WVN8 375 aa6.02□□□□□ -1.45
CLHC1-201ENST00000401408 ZBTB7CA1YPR0 619 aa6.01□□□□□ -1.45
CLHC1-201ENST00000401408 BCL11AQ9H165 835 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms