RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 FAM69CQ0P6D2 419 aa25.82■■□□□ 1.72
VAMP1-203ENST00000400911 RUSC2Q8N2Y8 1516 aa25.74■■□□□ 1.71
VAMP1-203ENST00000400911 IGF1RP08069 1367 aa25.74■■□□□ 1.71
VAMP1-203ENST00000400911 ABCC10Q5T3U5 1492 aa25.72■■□□□ 1.71
VAMP1-203ENST00000400911 KIF13AQ9H1H9 1805 aa25.69■■□□□ 1.7
VAMP1-203ENST00000400911 KIAA0586Q9BVV6 1533 aa25.68■■□□□ 1.7
VAMP1-203ENST00000400911 KIF27Q86VH2 1401 aa25.65■■□□□ 1.7
VAMP1-203ENST00000400911 MAPKBP1O60336 1514 aa25.64■■□□□ 1.7
VAMP1-203ENST00000400911 ADCY10Q96PN6 1610 aa25.61■■□□□ 1.69
VAMP1-203ENST00000400911 TTBK1Q5TCY1 1321 aaPredicted RBP25.59■■□□□ 1.69
VAMP1-203ENST00000400911 DIP2BQ9P265 1576 aa25.56■■□□□ 1.68
VAMP1-203ENST00000400911 PTPRGP23470 1445 aa25.55■■□□□ 1.68
VAMP1-203ENST00000400911 CARMIL1Q5VZK9 1371 aa25.55■■□□□ 1.68
VAMP1-203ENST00000400911 CUL7Q14999 1698 aa25.49■■□□□ 1.67
VAMP1-203ENST00000400911 KDM4FA0A1W2PPD8 638 aa25.48■■□□□ 1.67
VAMP1-203ENST00000400911 TNIKQ9UKE5 1360 aa25.46■■□□□ 1.67
VAMP1-203ENST00000400911 CARMIL2Q6F5E8 1435 aa25.45■■□□□ 1.66
VAMP1-203ENST00000400911 KDM6BO15054 1643 aa25.42■■□□□ 1.66
VAMP1-203ENST00000400911 ABCC2Q92887 1545 aa25.39■■□□□ 1.66
VAMP1-203ENST00000400911 ASXL2Q76L83 1435 aa25.37■■□□□ 1.65
VAMP1-203ENST00000400911 PLB1Q6P1J6 1458 aa25.33■■□□□ 1.65
VAMP1-203ENST00000400911 TSPOAP1O95153 1857 aa25.32■■□□□ 1.64
VAMP1-203ENST00000400911 UACAQ9BZF9 1416 aa25.32■■□□□ 1.64
VAMP1-203ENST00000400911 IQGAP2Q13576 1575 aa25.31■■□□□ 1.64
VAMP1-203ENST00000400911 UHRF1BP1LA0JNW5 1464 aa25.29■■□□□ 1.64
VAMP1-203ENST00000400911 DISP1Q96F81 1524 aa25.28■■□□□ 1.64
VAMP1-203ENST00000400911 GLI2P10070 1586 aa25.24■■□□□ 1.63
VAMP1-203ENST00000400911 RAPGEF2Q9Y4G8 1499 aa25.22■■□□□ 1.63
VAMP1-203ENST00000400911 EPRSP07814 1512 aaKnown RBP25.19■■□□□ 1.62
VAMP1-203ENST00000400911 KDM5BQ9UGL1 1544 aa25.19■■□□□ 1.62
VAMP1-203ENST00000400911 COL17A1Q9UMD9 1497 aaPredicted RBP25.18■■□□□ 1.62
VAMP1-203ENST00000400911 UGGT2Q9NYU1 1516 aa25.17■■□□□ 1.62
VAMP1-203ENST00000400911 PPRC1Q5VV67 1664 aaKnown RBP25.15■■□□□ 1.62
VAMP1-203ENST00000400911 ADGRL1O94910 1474 aa25.1■■□□□ 1.61
VAMP1-203ENST00000400911 TEX14Q8IWB6 1497 aa25.09■■□□□ 1.61
VAMP1-203ENST00000400911 KIAA0556O60303 1618 aa25.08■■□□□ 1.6
VAMP1-203ENST00000400911 ZCCHC11Q5TAX3 1644 aaKnown RBP25.05■■□□□ 1.6
VAMP1-203ENST00000400911 MAP3K4Q9Y6R4 1608 aa25.05■■□□□ 1.6
VAMP1-203ENST00000400911 WDR7Q9Y4E6 1490 aa25.04■■□□□ 1.6
VAMP1-203ENST00000400911 KCNH8Q96L42 1107 aa25.04■■□□□ 1.6
VAMP1-203ENST00000400911 ILDR1Q86SU0 546 aaPredicted RBP25.01■■□□□ 1.59
VAMP1-203ENST00000400911 CD109Q6YHK3 1445 aa24.97■■□□□ 1.59
VAMP1-203ENST00000400911 GOLGA3Q08378 1498 aa24.96■■□□□ 1.59
VAMP1-203ENST00000400911 MAGI3Q5TCQ9 1506 aa24.91■■□□□ 1.58
VAMP1-203ENST00000400911 ABCA8O94911 1581 aa24.9■■□□□ 1.58
VAMP1-203ENST00000400911 ARID3CA6NKF2 412 aa24.9■■□□□ 1.58
VAMP1-203ENST00000400911 PRXQ9BXM0 1461 aa24.89■■□□□ 1.58
VAMP1-203ENST00000400911 P3H3Q8IVL6 736 aa24.88■■□□□ 1.57
VAMP1-203ENST00000400911 FAM9AQ8IZU1 332 aaPredicted RBP24.84■■□□□ 1.57
VAMP1-203ENST00000400911 CTTNBP2Q8WZ74 1663 aa24.82■■□□□ 1.56
VAMP1-203ENST00000400911 HECW2Q9P2P5 1572 aa24.81■■□□□ 1.56
VAMP1-203ENST00000400911 ATP10BO94823 1461 aa24.78■■□□□ 1.56
VAMP1-203ENST00000400911 CFAP43Q8NDM7 1665 aa24.78■■□□□ 1.56
VAMP1-203ENST00000400911 ARAP3Q8WWN8 1544 aa24.71■■□□□ 1.55
VAMP1-203ENST00000400911 CSRNP3Q8WYN3 585 aa24.71■■□□□ 1.55
VAMP1-203ENST00000400911 RAPGEF3O95398 923 aa24.7■■□□□ 1.54
VAMP1-203ENST00000400911 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.69■■□□□ 1.54
VAMP1-203ENST00000400911 HNRNPUL2Q1KMD3 747 aaKnown RBP24.69■■□□□ 1.54
VAMP1-203ENST00000400911 PHLDB1Q86UU1 1377 aa24.67■■□□□ 1.54
VAMP1-203ENST00000400911 RANGAP1P46060 587 aaPredicted RBP24.65■■□□□ 1.54
VAMP1-203ENST00000400911 KIF21BO75037 1637 aa24.63■■□□□ 1.53
VAMP1-203ENST00000400911 ABCA9Q8IUA7 1624 aa24.58■■□□□ 1.53
VAMP1-203ENST00000400911 NEO1Q92859 1461 aa24.57■■□□□ 1.52
VAMP1-203ENST00000400911 SAMD9Q5K651 1589 aa24.56■■□□□ 1.52
VAMP1-203ENST00000400911 ARID4BQ4LE39 1312 aaPredicted RBP24.56■■□□□ 1.52
VAMP1-203ENST00000400911 PTPRMP28827 1452 aa24.54■■□□□ 1.52
VAMP1-203ENST00000400911 NUP153P49790 1475 aaKnown RBP24.54■■□□□ 1.52
VAMP1-203ENST00000400911 RAPGEF6Q8TEU7 1601 aa24.53■■□□□ 1.52
VAMP1-203ENST00000400911 PLEKHD1A6NEE1 506 aa24.52■■□□□ 1.52
VAMP1-203ENST00000400911 FHOD3Q2V2M9 1422 aa24.52■■□□□ 1.52
VAMP1-203ENST00000400911 ADAMTSL3P82987 1691 aa24.46■■□□□ 1.51
VAMP1-203ENST00000400911 FBXO41Q8TF61 875 aa24.45■■□□□ 1.5
VAMP1-203ENST00000400911 FRMPD1Q5SYB0 1578 aa24.44■■□□□ 1.5
VAMP1-203ENST00000400911 DENND4BO75064 1496 aaPredicted RBP24.43■■□□□ 1.5
VAMP1-203ENST00000400911 EEA1Q15075 1411 aa24.43■■□□□ 1.5
VAMP1-203ENST00000400911 AKNAQ7Z591 1439 aa24.42■■□□□ 1.5
VAMP1-203ENST00000400911 FANCAO15360 1455 aa24.38■■□□□ 1.49
VAMP1-203ENST00000400911 BCORL1Q5H9F3 1711 aa24.36■■□□□ 1.49
VAMP1-203ENST00000400911 PLPPR3Q6T4P5 718 aa24.36■■□□□ 1.49
VAMP1-203ENST00000400911 MADDQ8WXG6 1647 aa24.35■■□□□ 1.49
VAMP1-203ENST00000400911 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.34■■□□□ 1.49
VAMP1-203ENST00000400911 LMTK3Q96Q04 1460 aa24.33■■□□□ 1.49
VAMP1-203ENST00000400911 ARHGEF40Q8TER5 1519 aa24.32■■□□□ 1.48
VAMP1-203ENST00000400911 PCF11O94913 1555 aaKnown RBP24.32■■□□□ 1.48
VAMP1-203ENST00000400911 HSPA2P54652 639 aa24.3■■□□□ 1.48
VAMP1-203ENST00000400911 EHMT2Q96KQ7 1210 aa24.3■■□□□ 1.48
VAMP1-203ENST00000400911 YEATS2Q9ULM3 1422 aa24.29■■□□□ 1.48
VAMP1-203ENST00000400911 MLECQ14165 292 aa24.29■■□□□ 1.48
VAMP1-203ENST00000400911 ATP1B4Q9UN42 357 aaPredicted RBP24.29■■□□□ 1.48
VAMP1-203ENST00000400911 POGZQ7Z3K3 1410 aa24.28■■□□□ 1.48
VAMP1-203ENST00000400911 EFCAB5A4FU69 1503 aa24.28■■□□□ 1.48
VAMP1-203ENST00000400911 CDK13Q14004 1512 aaKnown RBP24.26■■□□□ 1.47
VAMP1-203ENST00000400911 TTC37Q6PGP7 1564 aa24.26■■□□□ 1.47
VAMP1-203ENST00000400911 RICTORQ6R327 1708 aa24.25■■□□□ 1.47
VAMP1-203ENST00000400911 SCAPERQ9BY12 1400 aa24.25■■□□□ 1.47
VAMP1-203ENST00000400911 UBTFP17480 764 aaKnown RBP24.24■■□□□ 1.47
VAMP1-203ENST00000400911 PLCH2O75038 1416 aa24.24■■□□□ 1.47
VAMP1-203ENST00000400911 MAGI2Q86UL8 1455 aa24.23■■□□□ 1.47
VAMP1-203ENST00000400911 ZMYM4Q5VZL5 1548 aa24.23■■□□□ 1.47
VAMP1-203ENST00000400911 ZFYVE16Q7Z3T8 1539 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms