RNA–Protein interactions for RNA: ENST00000400430.6

LINC00598-201, long intergenic non-protein coding RNA 598, humanhuman

TSL 2

Gene LINC00598, Length 702 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-201ENST00000400430 THOC2Q8NI27 1593 aaKnown RBP8.35□□□□□ -1.07
LINC00598-201ENST00000400430 PKD2Q13563 968 aa8.34□□□□□ -1.07
LINC00598-201ENST00000400430 BBXQ8WY36 941 aaPredicted RBP8.31□□□□□ -1.08
LINC00598-201ENST00000400430 PAXIP1Q6ZW49 1069 aaPredicted RBP8.27□□□□□ -1.09
LINC00598-201ENST00000400430 FBXO3Q9UK99 471 aa8.27□□□□□ -1.09
LINC00598-201ENST00000400430 NESP48681 1621 aa8.26□□□□□ -1.09
LINC00598-201ENST00000400430 NPM1P06748 294 aaKnown RBP eCLIP8.26□□□□□ -1.09
LINC00598-201ENST00000400430 RANGAP1P46060 587 aaPredicted RBP8.26□□□□□ -1.09
LINC00598-201ENST00000400430 C14orf37Q86TY3 774 aa8.26□□□□□ -1.09
LINC00598-201ENST00000400430 REM2Q8IYK8 340 aaPredicted RBP8.26□□□□□ -1.09
LINC00598-201ENST00000400430 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.26□□□□□ -1.09
LINC00598-201ENST00000400430 DCAF1Q9Y4B6 1507 aa8.24□□□□□ -1.09
LINC00598-201ENST00000400430 IFNLR1Q8IU57 520 aaPredicted RBP8.24□□□□□ -1.09
LINC00598-201ENST00000400430 PODXL2Q9NZ53 605 aa8.24□□□□□ -1.09
LINC00598-201ENST00000400430 TSHZ2Q9NRE2 1034 aa8.23□□□□□ -1.09
LINC00598-201ENST00000400430 VASPP50552 380 aaPredicted RBP8.22□□□□□ -1.09
LINC00598-201ENST00000400430 CFAP44Q96MT7 982 aa8.21□□□□□ -1.1
LINC00598-201ENST00000400430 BAZ1AQ9NRL2 1556 aaPredicted RBP8.21□□□□□ -1.1
LINC00598-201ENST00000400430 NCAPD3P42695 1498 aa8.2□□□□□ -1.1
LINC00598-201ENST00000400430 SPDYE1Q8NFV5 336 aaPredicted RBP8.2□□□□□ -1.1
LINC00598-201ENST00000400430 ZCCHC6Q5VYS8 1495 aaKnown RBP8.19□□□□□ -1.1
LINC00598-201ENST00000400430 SMARCA2P51531 1590 aa8.18□□□□□ -1.1
LINC00598-201ENST00000400430 PITPNM1O00562 1244 aa8.18□□□□□ -1.1
LINC00598-201ENST00000400430 RIMBP3CA6NJZ7 1639 aa8.18□□□□□ -1.1
LINC00598-201ENST00000400430 RIMBP3BA6NNM3 1639 aa8.18□□□□□ -1.1
LINC00598-201ENST00000400430 RIMBP3Q9UFD9 1639 aa8.18□□□□□ -1.1
LINC00598-201ENST00000400430 NBR1Q14596 966 aa8.17□□□□□ -1.1
LINC00598-201ENST00000400430 STAG3Q9UJ98 1225 aa8.17□□□□□ -1.1
LINC00598-201ENST00000400430 KIF21AQ7Z4S6 1674 aa8.14□□□□□ -1.11
LINC00598-201ENST00000400430 KLHL34Q8N239 644 aa8.12□□□□□ -1.11
LINC00598-201ENST00000400430 SPRYD3Q8NCJ5 442 aa8.11□□□□□ -1.11
LINC00598-201ENST00000400430 HMGXB3Q12766 1538 aa8.11□□□□□ -1.11
LINC00598-201ENST00000400430 LAMC3Q9Y6N6 1575 aa8.1□□□□□ -1.11
LINC00598-201ENST00000400430 CLEC11AQ9Y240 323 aa8.1□□□□□ -1.11
LINC00598-201ENST00000400430 ARHGEF11O15085 1522 aa8.09□□□□□ -1.11
LINC00598-201ENST00000400430 ATAD2BQ9ULI0 1458 aa8.09□□□□□ -1.11
LINC00598-201ENST00000400430 ILDR1Q86SU0 546 aaPredicted RBP8.09□□□□□ -1.11
LINC00598-201ENST00000400430 CHRDL2Q6WN34 429 aa8.08□□□□□ -1.12
LINC00598-201ENST00000400430 WDR62O43379 1518 aa8.08□□□□□ -1.12
LINC00598-201ENST00000400430 SUPT5HO00267 1087 aaKnown RBP8.06□□□□□ -1.12
LINC00598-201ENST00000400430 PRR29P0C7W0 189 aa8.06□□□□□ -1.12
LINC00598-201ENST00000400430 FXR2P51116 673 aaKnown RBP eCLIP8.05□□□□□ -1.12
LINC00598-201ENST00000400430 MRC2Q9UBG0 1479 aa8.05□□□□□ -1.12
LINC00598-201ENST00000400430 PDS5BQ9NTI5 1447 aa8.04□□□□□ -1.12
LINC00598-201ENST00000400430 TRIM26Q12899 539 aaPredicted RBP8.03□□□□□ -1.12
LINC00598-201ENST00000400430 NPM2Q86SE8 214 aaKnown RBP8.02□□□□□ -1.13
LINC00598-201ENST00000400430 CREBZFQ9NS37 354 aa8.01□□□□□ -1.13
LINC00598-201ENST00000400430 ECM2O94769 699 aaPredicted RBP8□□□□□ -1.13
LINC00598-201ENST00000400430 UBTFP17480 764 aaKnown RBP8□□□□□ -1.13
LINC00598-201ENST00000400430 PIP4P2Q8N4L2 257 aa7.99□□□□□ -1.13
LINC00598-201ENST00000400430 ARAP1Q96P48 1450 aa7.99□□□□□ -1.13
LINC00598-201ENST00000400430 RGL2O15211 777 aa7.98□□□□□ -1.13
LINC00598-201ENST00000400430 HRCP23327 699 aa7.97□□□□□ -1.13
LINC00598-201ENST00000400430 CYB5RLQ6IPT4 315 aa7.97□□□□□ -1.13
LINC00598-201ENST00000400430 MNX1P50219 401 aaPredicted RBP7.96□□□□□ -1.14
LINC00598-201ENST00000400430 MIER1Q8N108 512 aa7.96□□□□□ -1.14
LINC00598-201ENST00000400430 BAZ1BQ9UIG0 1483 aaKnown RBP7.95□□□□□ -1.14
LINC00598-201ENST00000400430 PLCD3Q8N3E9 789 aa7.95□□□□□ -1.14
LINC00598-201ENST00000400430 SMARCA4P51532 1647 aa7.94□□□□□ -1.14
LINC00598-201ENST00000400430 PRKAR2AP13861 404 aaKnown RBP7.94□□□□□ -1.14
LINC00598-201ENST00000400430 CHADLQ6NUI6 762 aa7.93□□□□□ -1.14
LINC00598-201ENST00000400430 PLEKHG5O94827 1062 aa7.92□□□□□ -1.14
LINC00598-201ENST00000400430 ZBTB47Q9UFB7 747 aaPredicted RBP7.91□□□□□ -1.14
LINC00598-201ENST00000400430 PEG3Q9GZU2 1588 aa7.89□□□□□ -1.15
LINC00598-201ENST00000400430 CADPSQ9ULU8 1353 aa7.89□□□□□ -1.15
LINC00598-201ENST00000400430 BRPF1P55201 1214 aaPredicted RBP7.89□□□□□ -1.15
LINC00598-201ENST00000400430 SPOCK2Q92563 424 aa7.89□□□□□ -1.15
LINC00598-201ENST00000400430 CEP164Q9UPV0 1460 aa7.88□□□□□ -1.15
LINC00598-201ENST00000400430 FARP1Q9Y4F1 1045 aaPredicted RBP7.88□□□□□ -1.15
LINC00598-201ENST00000400430 CHGAP10645 457 aaKnown RBP7.85□□□□□ -1.15
LINC00598-201ENST00000400430 RSF1Q96T23 1441 aaPredicted RBP7.85□□□□□ -1.15
LINC00598-201ENST00000400430 NUBP1P53384 320 aa7.84□□□□□ -1.15
LINC00598-201ENST00000400430 URB2Q14146 1524 aaKnown RBP7.83□□□□□ -1.16
LINC00598-201ENST00000400430 FANCD2Q9BXW9 1451 aa7.82□□□□□ -1.16
LINC00598-201ENST00000400430 POTEHQ6S545 545 aa7.82□□□□□ -1.16
LINC00598-201ENST00000400430 ZNF608Q9ULD9 1512 aaPredicted RBP7.82□□□□□ -1.16
LINC00598-201ENST00000400430 CHD1O14646 1710 aa7.78□□□□□ -1.16
LINC00598-201ENST00000400430 RASEFQ8IZ41 740 aa7.78□□□□□ -1.16
LINC00598-201ENST00000400430 C19orf67A6NJJ6 358 aa7.77□□□□□ -1.17
LINC00598-201ENST00000400430 HS6ST3Q8IZP7 471 aa7.77□□□□□ -1.17
LINC00598-201ENST00000400430 EIF4G3O43432 1585 aaKnown RBP7.76□□□□□ -1.17
LINC00598-201ENST00000400430 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.75□□□□□ -1.17
LINC00598-201ENST00000400430 IFT140Q96RY7 1462 aa7.75□□□□□ -1.17
LINC00598-201ENST00000400430 KDM4FA0A1W2PPD8 638 aa7.74□□□□□ -1.17
LINC00598-201ENST00000400430 FAM212AQ96EL1 285 aa7.74□□□□□ -1.17
LINC00598-201ENST00000400430 NKX1-1Q15270 411 aaPredicted RBP7.73□□□□□ -1.17
LINC00598-201ENST00000400430 LMOD2Q6P5Q4 547 aa7.73□□□□□ -1.17
LINC00598-201ENST00000400430 CLASP1Q7Z460 1538 aa7.73□□□□□ -1.17
LINC00598-201ENST00000400430 CD44P16070 742 aaKnown RBP7.72□□□□□ -1.17
LINC00598-201ENST00000400430 GSE1Q14687 1217 aa7.72□□□□□ -1.17
LINC00598-201ENST00000400430 CFTRP13569 1480 aa7.71□□□□□ -1.18
LINC00598-201ENST00000400430 PELP1Q8IZL8 1130 aaKnown RBP7.71□□□□□ -1.18
LINC00598-201ENST00000400430 ZMYND15Q9H091 742 aa7.71□□□□□ -1.18
LINC00598-201ENST00000400430 CCDC61Q9Y6R9 512 aa7.71□□□□□ -1.18
LINC00598-201ENST00000400430 GTPBP6O43824 516 aaPredicted RBP7.7□□□□□ -1.18
LINC00598-201ENST00000400430 ERCC6L2Q5T890 1561 aa7.7□□□□□ -1.18
LINC00598-201ENST00000400430 MROH2BQ7Z745 1585 aa7.7□□□□□ -1.18
LINC00598-201ENST00000400430 PAK3O75914 559 aaPredicted RBP7.68□□□□□ -1.18
LINC00598-201ENST00000400430 NEUROD2Q15784 382 aa7.68□□□□□ -1.18
LINC00598-201ENST00000400430 RSPH6AQ9H0K4 717 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms