RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 ESF1Q9H501 851 aaKnown RBP4.42□□□□□ -1.7
KNL1-202ENST00000399668 BAZ1AQ9NRL2 1556 aaPredicted RBP4.42□□□□□ -1.7
KNL1-202ENST00000399668 GOLGA3Q08378 1498 aa4.41□□□□□ -1.7
KNL1-202ENST00000399668 SCAF1Q9H7N4 1312 aaKnown RBP4.41□□□□□ -1.7
KNL1-202ENST00000399668 NBR1Q14596 966 aa4.4□□□□□ -1.71
KNL1-202ENST00000399668 PLEKHG5O94827 1062 aa4.39□□□□□ -1.71
KNL1-202ENST00000399668 NPM1P06748 294 aaKnown RBP eCLIP4.39□□□□□ -1.71
KNL1-202ENST00000399668 KCNH8Q96L42 1107 aa4.39□□□□□ -1.71
KNL1-202ENST00000399668 CECR2Q9BXF3 1484 aa4.39□□□□□ -1.71
KNL1-202ENST00000399668 TSPY4P0CV99 314 aa4.39□□□□□ -1.71
KNL1-202ENST00000399668 TSPY10P0CW01 314 aa4.39□□□□□ -1.71
KNL1-202ENST00000399668 RGL3Q3MIN7 710 aa4.39□□□□□ -1.71
KNL1-202ENST00000399668 HSP90AA1P07900 732 aaKnown RBP4.39□□□□□ -1.71
KNL1-202ENST00000399668 CCDC136Q96JN2 1154 aa4.39□□□□□ -1.71
KNL1-202ENST00000399668 WRNQ14191 1432 aaPredicted RBP eCLIP4.38□□□□□ -1.71
KNL1-202ENST00000399668 MRS2Q9HD23 443 aa4.38□□□□□ -1.71
KNL1-202ENST00000399668 ARXQ96QS3 562 aa4.37□□□□□ -1.71
KNL1-202ENST00000399668 EIF4G1Q04637 1599 aaKnown RBP4.37□□□□□ -1.71
KNL1-202ENST00000399668 MROH2BQ7Z745 1585 aa4.37□□□□□ -1.71
KNL1-202ENST00000399668 WDR43Q15061 677 aaKnown RBP eCLIP4.37□□□□□ -1.71
KNL1-202ENST00000399668 EIF4G2P78344 907 aaKnown RBP eCLIP4.36□□□□□ -1.71
KNL1-202ENST00000399668 KIF27Q86VH2 1401 aa4.36□□□□□ -1.71
KNL1-202ENST00000399668 ERCC6Q03468 1493 aa4.36□□□□□ -1.71
KNL1-202ENST00000399668 CEP164Q9UPV0 1460 aa4.36□□□□□ -1.71
KNL1-202ENST00000399668 UPF2Q9HAU5 1272 aaKnown RBP4.35□□□□□ -1.71
KNL1-202ENST00000399668 SUPT16HQ9Y5B9 1047 aaKnown RBP4.35□□□□□ -1.71
KNL1-202ENST00000399668 SOGA1O94964 1423 aa4.34□□□□□ -1.71
KNL1-202ENST00000399668 EEA1Q15075 1411 aa4.34□□□□□ -1.71
KNL1-202ENST00000399668 CCDC88BA6NC98 1476 aa4.34□□□□□ -1.71
KNL1-202ENST00000399668 SIN3AQ96ST3 1273 aa4.34□□□□□ -1.71
KNL1-202ENST00000399668 SMARCA4P51532 1647 aa4.34□□□□□ -1.71
KNL1-202ENST00000399668 PLEKHD1A6NEE1 506 aa4.33□□□□□ -1.72
KNL1-202ENST00000399668 PPM1GO15355 546 aaPredicted RBP4.33□□□□□ -1.72
KNL1-202ENST00000399668 EIF5BO60841 1220 aaKnown RBP4.33□□□□□ -1.72
KNL1-202ENST00000399668 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.33□□□□□ -1.72
KNL1-202ENST00000399668 A0A0G2JS52 829 aa4.33□□□□□ -1.72
KNL1-202ENST00000399668 CFDP1Q9UEE9 299 aaPredicted RBP4.33□□□□□ -1.72
KNL1-202ENST00000399668 C14orf37Q86TY3 774 aa4.32□□□□□ -1.72
KNL1-202ENST00000399668 TNIKQ9UKE5 1360 aa4.32□□□□□ -1.72
KNL1-202ENST00000399668 ZBTB7CA1YPR0 619 aa4.32□□□□□ -1.72
KNL1-202ENST00000399668 SMARCA2P51531 1590 aa4.32□□□□□ -1.72
KNL1-202ENST00000399668 CUX2O14529 1486 aa4.32□□□□□ -1.72
KNL1-202ENST00000399668 TNNT2P45379 298 aaPredicted RBP4.31□□□□□ -1.72
KNL1-202ENST00000399668 ANP32BQ92688 251 aaKnown RBP4.31□□□□□ -1.72
KNL1-202ENST00000399668 CCNB3Q8WWL7 1395 aa4.31□□□□□ -1.72
KNL1-202ENST00000399668 FOXD1Q16676 465 aa4.31□□□□□ -1.72
KNL1-202ENST00000399668 ARID4BQ4LE39 1312 aaPredicted RBP4.3□□□□□ -1.72
KNL1-202ENST00000399668 CARD11Q9BXL7 1154 aa4.3□□□□□ -1.72
KNL1-202ENST00000399668 NEUROD2Q15784 382 aa4.3□□□□□ -1.72
KNL1-202ENST00000399668 FHAD1B1AJZ9 1412 aa4.3□□□□□ -1.72
KNL1-202ENST00000399668 CC2D1BQ5T0F9 858 aaKnown RBP4.3□□□□□ -1.72
KNL1-202ENST00000399668 LAS1LQ9Y4W2 734 aaKnown RBP4.3□□□□□ -1.72
KNL1-202ENST00000399668 KNSTRNQ9Y448 316 aa4.29□□□□□ -1.72
KNL1-202ENST00000399668 TOP2AP11388 1531 aaKnown RBP4.29□□□□□ -1.72
KNL1-202ENST00000399668 PPP1R15AO75807 674 aaPredicted RBP4.29□□□□□ -1.72
KNL1-202ENST00000399668 CARMIL1Q5VZK9 1371 aa4.29□□□□□ -1.72
KNL1-202ENST00000399668 DCAF11Q8TEB1 546 aa4.28□□□□□ -1.72
KNL1-202ENST00000399668 B4GALNT3Q6L9W6 998 aa4.28□□□□□ -1.72
KNL1-202ENST00000399668 MYH16Q9H6N6 1097 aa4.28□□□□□ -1.72
KNL1-202ENST00000399668 ARHGAP35Q9NRY4 1499 aa4.28□□□□□ -1.72
KNL1-202ENST00000399668 AK9Q5TCS8 1911 aa4.28□□□□□ -1.72
KNL1-202ENST00000399668 KANK4Q5T7N3 995 aaPredicted RBP4.27□□□□□ -1.73
KNL1-202ENST00000399668 FTSJ3Q8IY81 847 aaKnown RBP4.27□□□□□ -1.73
KNL1-202ENST00000399668 TPRNQ4KMQ1 711 aa4.27□□□□□ -1.73
KNL1-202ENST00000399668 RUSC2Q8N2Y8 1516 aa4.26□□□□□ -1.73
KNL1-202ENST00000399668 SAFB2Q14151 953 aaKnown RBP eCLIP4.26□□□□□ -1.733e-7■■□□□ 13.3
KNL1-202ENST00000399668 RAPGEF2Q9Y4G8 1499 aa4.26□□□□□ -1.73
KNL1-202ENST00000399668 MYO10Q9HD67 2058 aa4.26□□□□□ -1.73
KNL1-202ENST00000399668 VPS8Q8N3P4 1428 aa4.25□□□□□ -1.73
KNL1-202ENST00000399668 SETD5Q9C0A6 1442 aa4.25□□□□□ -1.73
KNL1-202ENST00000399668 SOX12O15370 315 aa4.25□□□□□ -1.73
KNL1-202ENST00000399668 LMOD2Q6P5Q4 547 aa4.25□□□□□ -1.73
KNL1-202ENST00000399668 FRAT1Q92837 279 aaPredicted RBP4.25□□□□□ -1.73
KNL1-202ENST00000399668 U2SURPO15042 1029 aaKnown RBP4.25□□□□□ -1.73
KNL1-202ENST00000399668 MLECQ14165 292 aa4.25□□□□□ -1.73
KNL1-202ENST00000399668 POGKQ9P215 609 aa4.25□□□□□ -1.73
KNL1-202ENST00000399668 GOLGA4Q13439 2230 aaKnown RBP4.25□□□□□ -1.73
KNL1-202ENST00000399668 RAB3GAP2Q9H2M9 1393 aa4.25□□□□□ -1.73
KNL1-202ENST00000399668 RGS3P49796 1198 aa4.24□□□□□ -1.73
KNL1-202ENST00000399668 CDCA8Q53HL2 280 aa4.24□□□□□ -1.73
KNL1-202ENST00000399668 CFAP53Q96M91 514 aa4.24□□□□□ -1.73
KNL1-202ENST00000399668 BECN1Q14457 450 aa4.24□□□□□ -1.73
KNL1-202ENST00000399668 STK26Q9P289 416 aa4.24□□□□□ -1.73
KNL1-202ENST00000399668 HAP1P54257 671 aaPredicted RBP4.24□□□□□ -1.73
KNL1-202ENST00000399668 TAOK2Q9UL54 1235 aa4.23□□□□□ -1.73
KNL1-202ENST00000399668 TDRD9Q8NDG6 1382 aaKnown RBP4.23□□□□□ -1.73
KNL1-202ENST00000399668 SRPK2P78362 688 aaKnown RBP4.23□□□□□ -1.73
KNL1-202ENST00000399668 DDRGK1Q96HY6 314 aa4.23□□□□□ -1.73
KNL1-202ENST00000399668 GGT6Q6P531 493 aa4.22□□□□□ -1.73
KNL1-202ENST00000399668 TMF1P82094 1093 aa4.22□□□□□ -1.73
KNL1-202ENST00000399668 ROCK2O75116 1388 aaKnown RBP4.22□□□□□ -1.73
KNL1-202ENST00000399668 MYO9BQ13459 2157 aa4.22□□□□□ -1.73
KNL1-202ENST00000399668 MAPK8IP3Q9UPT6 1336 aa4.22□□□□□ -1.73
KNL1-202ENST00000399668 NCLP19338 710 aaKnown RBP4.22□□□□□ -1.73
KNL1-202ENST00000399668 TRHP20396 242 aaPredicted RBP4.22□□□□□ -1.73
KNL1-202ENST00000399668 PKD2Q13563 968 aa4.22□□□□□ -1.73
KNL1-202ENST00000399668 MPHOSPH9Q99550 1183 aa4.22□□□□□ -1.73
KNL1-202ENST00000399668 GON4LQ3T8J9 2241 aa4.22□□□□□ -1.73
KNL1-202ENST00000399668 TRIM44Q96DX7 344 aaPredicted RBP4.22□□□□□ -1.73
KNL1-202ENST00000399668 PPP4R2Q9NY27 417 aa4.21□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms