RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 CLSTN1O94985 981 aa14.69□□□□□ -0.06
CACNA1C-216ENST00000399638 PRM3Q9NNZ6 103 aa14.67□□□□□ -0.06
CACNA1C-216ENST00000399638 PHF23Q9BUL5 403 aaPredicted RBP14.66□□□□□ -0.06
CACNA1C-216ENST00000399638 TSPY4P0CV99 314 aa14.66□□□□□ -0.06
CACNA1C-216ENST00000399638 TSPY10P0CW01 314 aa14.66□□□□□ -0.06
CACNA1C-216ENST00000399638 CHIC2Q9UKJ5 165 aa14.65□□□□□ -0.06
CACNA1C-216ENST00000399638 MYH16Q9H6N6 1097 aa14.64□□□□□ -0.07
CACNA1C-216ENST00000399638 ISY1Q9ULR0 285 aaKnown RBP14.64□□□□□ -0.07
CACNA1C-216ENST00000399638 GOLGA2Q08379 1002 aa14.64□□□□□ -0.07
CACNA1C-216ENST00000399638 PPM1GO15355 546 aaPredicted RBP14.64□□□□□ -0.07
CACNA1C-216ENST00000399638 TMC1Q8TDI8 760 aa14.63□□□□□ -0.07
CACNA1C-216ENST00000399638 ANP32AP39687 249 aaKnown RBP14.63□□□□□ -0.07
CACNA1C-216ENST00000399638 FBXO3Q9UK99 471 aa14.62□□□□□ -0.07
CACNA1C-216ENST00000399638 WDR43Q15061 677 aaKnown RBP eCLIP14.61□□□□□ -0.07
CACNA1C-216ENST00000399638 DCAF8L1A6NGE4 600 aa14.6□□□□□ -0.07
CACNA1C-216ENST00000399638 ERCC6Q03468 1493 aa14.6□□□□□ -0.07
CACNA1C-216ENST00000399638 UPF2Q9HAU5 1272 aaKnown RBP14.6□□□□□ -0.07
CACNA1C-216ENST00000399638 TMX4Q9H1E5 349 aaPredicted RBP14.58□□□□□ -0.07
CACNA1C-216ENST00000399638 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.58□□□□□ -0.07
CACNA1C-216ENST00000399638 KRI1Q8N9T8 703 aaKnown RBP14.58□□□□□ -0.08
CACNA1C-216ENST00000399638 ANO8Q9HCE9 1232 aaPredicted RBP14.56□□□□□ -0.08
CACNA1C-216ENST00000399638 CSRNP3Q8WYN3 585 aa14.51□□□□□ -0.09
CACNA1C-216ENST00000399638 POGKQ9P215 609 aa14.5□□□□□ -0.09
CACNA1C-216ENST00000399638 PDE4CQ08493 712 aa14.5□□□□□ -0.09
CACNA1C-216ENST00000399638 SOX12O15370 315 aa14.49□□□□□ -0.09
CACNA1C-216ENST00000399638 MEX3CQ5U5Q3 659 aaKnown RBP14.48□□□□□ -0.09
CACNA1C-216ENST00000399638 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.48□□□□□ -0.09
CACNA1C-216ENST00000399638 LAS1LQ9Y4W2 734 aaKnown RBP14.47□□□□□ -0.09
CACNA1C-216ENST00000399638 TONSLQ96HA7 1378 aa14.47□□□□□ -0.09
CACNA1C-216ENST00000399638 G3V3G9 751 aa14.47□□□□□ -0.09
CACNA1C-216ENST00000399638 DCAF8Q5TAQ9 597 aa14.47□□□□□ -0.09
CACNA1C-216ENST00000399638 FAM9BQ8IZU0 186 aa14.45□□□□□ -0.1
CACNA1C-216ENST00000399638 KLHL34Q8N239 644 aa14.45□□□□□ -0.1
CACNA1C-216ENST00000399638 EIF4G2P78344 907 aaKnown RBP eCLIP14.44□□□□□ -0.1
CACNA1C-216ENST00000399638 EEA1Q15075 1411 aa14.44□□□□□ -0.1
CACNA1C-216ENST00000399638 PLEKHD1A6NEE1 506 aa14.44□□□□□ -0.1
CACNA1C-216ENST00000399638 NCLP19338 710 aaKnown RBP14.43□□□□□ -0.1
CACNA1C-216ENST00000399638 ZNF330Q9Y3S2 320 aaPredicted RBP14.43□□□□□ -0.1
CACNA1C-216ENST00000399638 CSB-PGBD3P0DP91 1061 aa14.43□□□□□ -0.1
CACNA1C-216ENST00000399638 RGL3Q3MIN7 710 aa14.43□□□□□ -0.1
CACNA1C-216ENST00000399638 MSH5O43196 834 aa14.42□□□□□ -0.1
CACNA1C-216ENST00000399638 ZRSR1Q15695 479 aaKnown RBP14.41□□□□□ -0.1
CACNA1C-216ENST00000399638 DNTTIP2Q5QJE6 756 aaKnown RBP14.41□□□□□ -0.1
CACNA1C-216ENST00000399638 OS9Q13438 667 aaPredicted RBP14.41□□□□□ -0.1
CACNA1C-216ENST00000399638 NAP1L2Q9ULW6 460 aaPredicted RBP14.4□□□□□ -0.1
CACNA1C-216ENST00000399638 PAK3O75914 559 aaPredicted RBP14.39□□□□□ -0.11
CACNA1C-216ENST00000399638 RTN4Q9NQC3 1192 aaKnown RBP14.39□□□□□ -0.11
CACNA1C-216ENST00000399638 HDGFP51858 240 aaKnown RBP14.38□□□□□ -0.11
CACNA1C-216ENST00000399638 TNNT2P45379 298 aaPredicted RBP14.38□□□□□ -0.11
CACNA1C-216ENST00000399638 CFAP53Q96M91 514 aa14.35□□□□□ -0.11
CACNA1C-216ENST00000399638 ARID3AQ99856 593 aa14.35□□□□□ -0.11
CACNA1C-216ENST00000399638 SCRIBQ14160 1630 aa14.35□□□□□ -0.11
CACNA1C-216ENST00000399638 TRIM44Q96DX7 344 aaPredicted RBP14.35□□□□□ -0.11
CACNA1C-216ENST00000399638 ANP32EQ9BTT0 268 aa14.35□□□□□ -0.11
CACNA1C-216ENST00000399638 PLCB2Q00722 1185 aa14.34□□□□□ -0.11
CACNA1C-216ENST00000399638 PTMAP06454 111 aaKnown RBP14.34□□□□□ -0.11
CACNA1C-216ENST00000399638 MTUS2Q5JR59 1369 aa14.33□□□□□ -0.12
CACNA1C-216ENST00000399638 ERICH6BQ5W0A0 696 aa14.32□□□□□ -0.12
CACNA1C-216ENST00000399638 FGD1P98174 961 aa14.32□□□□□ -0.12
CACNA1C-216ENST00000399638 MAPK8IP3Q9UPT6 1336 aa14.28□□□□□ -0.12
CACNA1C-216ENST00000399638 CASC1Q6TDU7 716 aa14.28□□□□□ -0.12
CACNA1C-216ENST00000399638 HNRNPUQ00839 825 aaKnown RBP eCLIP14.28□□□□□ -0.12
CACNA1C-216ENST00000399638 RRP7BPQ9NSQ0 103 aa14.28□□□□□ -0.12
CACNA1C-216ENST00000399638 RSF1Q96T23 1441 aaPredicted RBP14.27□□□□□ -0.12
CACNA1C-216ENST00000399638 RB1CC1Q8TDY2 1594 aa14.27□□□□□ -0.13
CACNA1C-216ENST00000399638 FKBP8Q14318 412 aa14.26□□□□□ -0.13
CACNA1C-216ENST00000399638 NAP1L5Q96NT1 182 aaPredicted RBP14.26□□□□□ -0.13
CACNA1C-216ENST00000399638 KCNJ4P48050 445 aa14.24□□□□□ -0.13
CACNA1C-216ENST00000399638 DDX10Q13206 875 aaKnown RBP14.24□□□□□ -0.13
CACNA1C-216ENST00000399638 NEUROD2Q15784 382 aa14.24□□□□□ -0.13
CACNA1C-216ENST00000399638 SAFB2Q14151 953 aaKnown RBP eCLIP14.24□□□□□ -0.13
CACNA1C-216ENST00000399638 TNIKQ9UKE5 1360 aa14.23□□□□□ -0.13
CACNA1C-216ENST00000399638 MIER1Q8N108 512 aa14.21□□□□□ -0.13
CACNA1C-216ENST00000399638 CWC22Q9HCG8 908 aaKnown RBP14.21□□□□□ -0.13
CACNA1C-216ENST00000399638 U2SURPO15042 1029 aaKnown RBP14.21□□□□□ -0.13
CACNA1C-216ENST00000399638 FTSJ3Q8IY81 847 aaKnown RBP14.21□□□□□ -0.13
CACNA1C-216ENST00000399638 SENP3-EIF4A1A0A087X0R7 540 aa14.2□□□□□ -0.14
CACNA1C-216ENST00000399638 NUDCQ9Y266 331 aa14.2□□□□□ -0.14
CACNA1C-216ENST00000399638 CNKSR2Q8WXI2 1034 aa14.19□□□□□ -0.14
CACNA1C-216ENST00000399638 SRPK2P78362 688 aaKnown RBP14.19□□□□□ -0.14
CACNA1C-216ENST00000399638 GTF2E1P29083 439 aaPredicted RBP14.19□□□□□ -0.14
CACNA1C-216ENST00000399638 GGT6Q6P531 493 aa14.19□□□□□ -0.14
CACNA1C-216ENST00000399638 STK26Q9P289 416 aa14.19□□□□□ -0.14
CACNA1C-216ENST00000399638 CFDP1Q9UEE9 299 aaPredicted RBP14.18□□□□□ -0.14
CACNA1C-216ENST00000399638 IRX6P78412 446 aaPredicted RBP14.18□□□□□ -0.14
CACNA1C-216ENST00000399638 CEP162Q5TB80 1403 aa14.18□□□□□ -0.14
CACNA1C-216ENST00000399638 KNSTRNQ9Y448 316 aa14.17□□□□□ -0.14
CACNA1C-216ENST00000399638 GOLGA3Q08378 1498 aa14.17□□□□□ -0.14
CACNA1C-216ENST00000399638 KANK1Q14678 1352 aa14.15□□□□□ -0.14
CACNA1C-216ENST00000399638 RTF1Q92541 710 aaKnown RBP14.15□□□□□ -0.14
CACNA1C-216ENST00000399638 PATL2C9JE40 543 aaKnown RBP14.15□□□□□ -0.14
CACNA1C-216ENST00000399638 EVA1CP58658 441 aa14.15□□□□□ -0.14
CACNA1C-216ENST00000399638 CDCA8Q53HL2 280 aa14.14□□□□□ -0.15
CACNA1C-216ENST00000399638 CCDC136Q96JN2 1154 aa14.14□□□□□ -0.15
CACNA1C-216ENST00000399638 NOC3LQ8WTT2 800 aaKnown RBP14.13□□□□□ -0.15
CACNA1C-216ENST00000399638 MRS2Q9HD23 443 aa14.13□□□□□ -0.15
CACNA1C-216ENST00000399638 TAF7LQ5H9L4 462 aa14.13□□□□□ -0.15
CACNA1C-216ENST00000399638 VPS53Q5VIR6 699 aa14.13□□□□□ -0.15
CACNA1C-216ENST00000399638 CHMP3Q9Y3E7 222 aa14.13□□□□□ -0.15
CACNA1C-216ENST00000399638 EID1Q9Y6B2 187 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms