RNA–Protein interactions for RNA: ENST00000399408.6

ABCC1-201, Transcript of ATP binding cassette subfamily C member 1, humanhuman

TSL 5 BASIC

Gene ABCC1, Length 6,594 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC1-201ENST00000399408 BAZ1AQ9NRL2 1556 aaPredicted RBP20.59■□□□□ 0.89
ABCC1-201ENST00000399408 PLEKHD1A6NEE1 506 aa20.57■□□□□ 0.88
ABCC1-201ENST00000399408 WDR43Q15061 677 aaKnown RBP eCLIP20.57■□□□□ 0.88
ABCC1-201ENST00000399408 HIRIP3Q9BW71 556 aaPredicted RBP20.56■□□□□ 0.88
ABCC1-201ENST00000399408 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.53■□□□□ 0.88
ABCC1-201ENST00000399408 CCDC136Q96JN2 1154 aa20.53■□□□□ 0.88
ABCC1-201ENST00000399408 PLPPR3Q6T4P5 718 aa20.52■□□□□ 0.88
ABCC1-201ENST00000399408 UPF2Q9HAU5 1272 aaKnown RBP20.5■□□□□ 0.87
ABCC1-201ENST00000399408 CECR2Q9BXF3 1484 aa20.5■□□□□ 0.87
ABCC1-201ENST00000399408 KCNH8Q96L42 1107 aa20.48■□□□□ 0.87
ABCC1-201ENST00000399408 CFDP1Q9UEE9 299 aaPredicted RBP20.45■□□□□ 0.86
ABCC1-201ENST00000399408 HSP90AA1P07900 732 aaKnown RBP20.43■□□□□ 0.86
ABCC1-201ENST00000399408 SCAF1Q9H7N4 1312 aaKnown RBP20.38■□□□□ 0.85
ABCC1-201ENST00000399408 RGL3Q3MIN7 710 aa20.36■□□□□ 0.85
ABCC1-201ENST00000399408 IRX6P78412 446 aaPredicted RBP20.35■□□□□ 0.85
ABCC1-201ENST00000399408 FHAD1B1AJZ9 1412 aa20.32■□□□□ 0.84
ABCC1-201ENST00000399408 SOGA1O94964 1423 aa20.32■□□□□ 0.84
ABCC1-201ENST00000399408 ANP32BQ92688 251 aaKnown RBP20.31■□□□□ 0.84
ABCC1-201ENST00000399408 CARMIL1Q5VZK9 1371 aa20.3■□□□□ 0.84
ABCC1-201ENST00000399408 PPP1R15AO75807 674 aaPredicted RBP20.29■□□□□ 0.84
ABCC1-201ENST00000399408 CDCA8Q53HL2 280 aa20.29■□□□□ 0.84
ABCC1-201ENST00000399408 CCNB3Q8WWL7 1395 aa20.28■□□□□ 0.84
ABCC1-201ENST00000399408 CUX2O14529 1486 aa20.28■□□□□ 0.84
ABCC1-201ENST00000399408 CARD11Q9BXL7 1154 aa20.28■□□□□ 0.84
ABCC1-201ENST00000399408 SIN3AQ96ST3 1273 aa20.27■□□□□ 0.84
ABCC1-201ENST00000399408 ERCC6Q03468 1493 aa20.25■□□□□ 0.83
ABCC1-201ENST00000399408 MROH2BQ7Z745 1585 aa20.24■□□□□ 0.83
ABCC1-201ENST00000399408 KNSTRNQ9Y448 316 aa20.23■□□□□ 0.83
ABCC1-201ENST00000399408 CCDC88BA6NC98 1476 aa20.22■□□□□ 0.83
ABCC1-201ENST00000399408 SENP3Q9H4L4 574 aaPredicted RBP20.22■□□□□ 0.83
ABCC1-201ENST00000399408 MYH16Q9H6N6 1097 aa20.21■□□□□ 0.83
ABCC1-201ENST00000399408 CFAP53Q96M91 514 aa20.2■□□□□ 0.82
ABCC1-201ENST00000399408 VPS8Q8N3P4 1428 aa20.18■□□□□ 0.82
ABCC1-201ENST00000399408 EIF4G1Q04637 1599 aaKnown RBP20.16■□□□□ 0.82
ABCC1-201ENST00000399408 NBR1Q14596 966 aa20.16■□□□□ 0.82
ABCC1-201ENST00000399408 TIMELESSQ9UNS1 1208 aa20.14■□□□□ 0.82
ABCC1-201ENST00000399408 ABCC8Q09428 1581 aa20.12■□□□□ 0.81
ABCC1-201ENST00000399408 SMARCA2P51531 1590 aa20.11■□□□□ 0.81
ABCC1-201ENST00000399408 SUPT16HQ9Y5B9 1047 aaKnown RBP20.1■□□□□ 0.81
ABCC1-201ENST00000399408 C14orf37Q86TY3 774 aa20.1■□□□□ 0.81
ABCC1-201ENST00000399408 SENP3-EIF4A1A0A087X0R7 540 aa20.09■□□□□ 0.81
ABCC1-201ENST00000399408 ZBTB7CA1YPR0 619 aa20.08■□□□□ 0.8
ABCC1-201ENST00000399408 SETD5Q9C0A6 1442 aa20.08■□□□□ 0.8
ABCC1-201ENST00000399408 ARHGAP35Q9NRY4 1499 aa20.07■□□□□ 0.8
ABCC1-201ENST00000399408 ARID4BQ4LE39 1312 aaPredicted RBP20.07■□□□□ 0.8
ABCC1-201ENST00000399408 DDRGK1Q96HY6 314 aa20.06■□□□□ 0.8
ABCC1-201ENST00000399408 KANK4Q5T7N3 995 aaPredicted RBP20.04■□□□□ 0.8
ABCC1-201ENST00000399408 BECN1Q14457 450 aa20.03■□□□□ 0.8
ABCC1-201ENST00000399408 DCAF11Q8TEB1 546 aa20.02■□□□□ 0.8
ABCC1-201ENST00000399408 PPM1GO15355 546 aaPredicted RBP20.02■□□□□ 0.8
ABCC1-201ENST00000399408 POGKQ9P215 609 aa20.01■□□□□ 0.79
ABCC1-201ENST00000399408 NUDCQ9Y266 331 aa20■□□□□ 0.79
ABCC1-201ENST00000399408 PLEKHG5O94827 1062 aa20■□□□□ 0.79
ABCC1-201ENST00000399408 MAPK8IP3Q9UPT6 1336 aa20■□□□□ 0.79
ABCC1-201ENST00000399408 TOP2AP11388 1531 aaKnown RBP20■□□□□ 0.79
ABCC1-201ENST00000399408 EIF5BO60841 1220 aaKnown RBP19.99■□□□□ 0.79
ABCC1-201ENST00000399408 TMF1P82094 1093 aa19.99■□□□□ 0.79
ABCC1-201ENST00000399408 NEUROD2Q15784 382 aa19.99■□□□□ 0.79
ABCC1-201ENST00000399408 KANK1Q14678 1352 aa19.98■□□□□ 0.79
ABCC1-201ENST00000399408 PDS5BQ9NTI5 1447 aa19.98■□□□□ 0.79
ABCC1-201ENST00000399408 PPP4R2Q9NY27 417 aa19.98■□□□□ 0.79
ABCC1-201ENST00000399408 CC2D1BQ5T0F9 858 aaKnown RBP19.98■□□□□ 0.79
ABCC1-201ENST00000399408 FTSJ3Q8IY81 847 aaKnown RBP19.97■□□□□ 0.79
ABCC1-201ENST00000399408 ARXQ96QS3 562 aa19.97■□□□□ 0.79
ABCC1-201ENST00000399408 FMN1Q68DA7 1419 aa19.96■□□□□ 0.79
ABCC1-201ENST00000399408 CARMIL2Q6F5E8 1435 aa19.94■□□□□ 0.78
ABCC1-201ENST00000399408 CCER2I3L3R5 266 aa19.93■□□□□ 0.78
ABCC1-201ENST00000399408 A0A0G2JS52 829 aa19.93■□□□□ 0.78
ABCC1-201ENST00000399408 TDRD9Q8NDG6 1382 aaKnown RBP19.93■□□□□ 0.78
ABCC1-201ENST00000399408 HSPA5P11021 654 aaKnown RBP19.92■□□□□ 0.78
ABCC1-201ENST00000399408 WIZO95785 1651 aa19.91■□□□□ 0.78
ABCC1-201ENST00000399408 TNNT2P45379 298 aaPredicted RBP19.91■□□□□ 0.78
ABCC1-201ENST00000399408 PKD2Q13563 968 aa19.91■□□□□ 0.78
ABCC1-201ENST00000399408 RAB3GAP2Q9H2M9 1393 aa19.89■□□□□ 0.78
ABCC1-201ENST00000399408 LAS1LQ9Y4W2 734 aaKnown RBP19.89■□□□□ 0.77
ABCC1-201ENST00000399408 FRAT1Q92837 279 aaPredicted RBP19.86■□□□□ 0.77
ABCC1-201ENST00000399408 ANP32EQ9BTT0 268 aa19.85■□□□□ 0.77
ABCC1-201ENST00000399408 U2SURPO15042 1029 aaKnown RBP19.85■□□□□ 0.77
ABCC1-201ENST00000399408 GOLGA6L22H0YM25 854 aa19.84■□□□□ 0.77
ABCC1-201ENST00000399408 HAP1P54257 671 aaPredicted RBP19.84■□□□□ 0.77
ABCC1-201ENST00000399408 CADPSQ9ULU8 1353 aa19.84■□□□□ 0.77
ABCC1-201ENST00000399408 CASC1Q6TDU7 716 aa19.84■□□□□ 0.77
ABCC1-201ENST00000399408 FOXD1Q16676 465 aa19.83■□□□□ 0.77
ABCC1-201ENST00000399408 MPHOSPH9Q99550 1183 aa19.83■□□□□ 0.77
ABCC1-201ENST00000399408 MS4A1P11836 297 aa19.83■□□□□ 0.76
ABCC1-201ENST00000399408 PNNQ9H307 717 aaKnown RBP19.83■□□□□ 0.76
ABCC1-201ENST00000399408 RAPGEF2Q9Y4G8 1499 aa19.83■□□□□ 0.76
ABCC1-201ENST00000399408 NCLP19338 710 aaKnown RBP19.82■□□□□ 0.76
ABCC1-201ENST00000399408 CHMP4BQ9H444 224 aaKnown RBP19.82■□□□□ 0.76
ABCC1-201ENST00000399408 RGS3P49796 1198 aa19.81■□□□□ 0.76
ABCC1-201ENST00000399408 ANKRD30AQ9BXX3 1397 aa19.8■□□□□ 0.76
ABCC1-201ENST00000399408 HDGFP51858 240 aaKnown RBP19.79■□□□□ 0.76
ABCC1-201ENST00000399408 NUP155O75694 1391 aa19.78■□□□□ 0.76
ABCC1-201ENST00000399408 MORC1Q86VD1 984 aa19.78■□□□□ 0.76
ABCC1-201ENST00000399408 SRPK2P78362 688 aaKnown RBP19.78■□□□□ 0.76
ABCC1-201ENST00000399408 B4GALNT3Q6L9W6 998 aa19.78■□□□□ 0.76
ABCC1-201ENST00000399408 KTN1Q86UP2 1357 aaKnown RBP19.77■□□□□ 0.76
ABCC1-201ENST00000399408 EFCAB2Q5VUJ9 269 aa19.77■□□□□ 0.76
ABCC1-201ENST00000399408 GGT6Q6P531 493 aa19.77■□□□□ 0.75
ABCC1-201ENST00000399408 FHOD3Q2V2M9 1422 aa19.77■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms