RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 AQRO60306 1485 aaKnown RBP eCLIP26.56■■□□□ 1.84
HLA-DQB1-204ENST00000399084 TARBP1Q13395 1621 aaKnown RBP26.55■■□□□ 1.84
HLA-DQB1-204ENST00000399084 TIAM1Q13009 1591 aa26.55■■□□□ 1.84
HLA-DQB1-204ENST00000399084 HNRNPUL2Q1KMD3 747 aaKnown RBP26.54■■□□□ 1.84
HLA-DQB1-204ENST00000399084 MRC2Q9UBG0 1479 aa26.54■■□□□ 1.84
HLA-DQB1-204ENST00000399084 CLSPNQ9HAW4 1339 aa26.52■■□□□ 1.84
HLA-DQB1-204ENST00000399084 TDRD9Q8NDG6 1382 aaKnown RBP26.51■■□□□ 1.83
HLA-DQB1-204ENST00000399084 FYCO1Q9BQS8 1478 aa26.48■■□□□ 1.83
HLA-DQB1-204ENST00000399084 FMN1Q68DA7 1419 aa26.47■■□□□ 1.83
HLA-DQB1-204ENST00000399084 CCNB3Q8WWL7 1395 aa26.46■■□□□ 1.83
HLA-DQB1-204ENST00000399084 CASKIN1Q8WXD9 1431 aa26.45■■□□□ 1.83
HLA-DQB1-204ENST00000399084 LRRC9Q6ZRR7 1453 aa26.44■■□□□ 1.82
HLA-DQB1-204ENST00000399084 CFAP43Q8NDM7 1665 aa26.43■■□□□ 1.82
HLA-DQB1-204ENST00000399084 SAMD9Q5K651 1589 aa26.38■■□□□ 1.81
HLA-DQB1-204ENST00000399084 IFT140Q96RY7 1462 aa26.37■■□□□ 1.81
HLA-DQB1-204ENST00000399084 PCF11O94913 1555 aaKnown RBP26.37■■□□□ 1.81
HLA-DQB1-204ENST00000399084 WDR62O43379 1518 aa26.36■■□□□ 1.81
HLA-DQB1-204ENST00000399084 FHOD3Q2V2M9 1422 aa26.34■■□□□ 1.81
HLA-DQB1-204ENST00000399084 PBRM1Q86U86 1689 aa26.33■■□□□ 1.81
HLA-DQB1-204ENST00000399084 GRIN2BQ13224 1484 aa26.33■■□□□ 1.81
HLA-DQB1-204ENST00000399084 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.3■■□□□ 1.8
HLA-DQB1-204ENST00000399084 THOC2Q8NI27 1593 aaKnown RBP26.29■■□□□ 1.8
HLA-DQB1-204ENST00000399084 ADAMTS12P58397 1594 aa26.26■■□□□ 1.79
HLA-DQB1-204ENST00000399084 P3H3Q8IVL6 736 aa26.26■■□□□ 1.79
HLA-DQB1-204ENST00000399084 SNAPC4Q5SXM2 1469 aa26.25■■□□□ 1.79
HLA-DQB1-204ENST00000399084 DHX57Q6P158 1386 aaKnown RBP26.21■■□□□ 1.79
HLA-DQB1-204ENST00000399084 PHLDB1Q86UU1 1377 aa26.18■■□□□ 1.78
HLA-DQB1-204ENST00000399084 IQGAP2Q13576 1575 aa26.17■■□□□ 1.78
HLA-DQB1-204ENST00000399084 ZNF316A6NFI3 1004 aaPredicted RBP26.16■■□□□ 1.78
HLA-DQB1-204ENST00000399084 ATP1B4Q9UN42 357 aaPredicted RBP26.14■■□□□ 1.77
HLA-DQB1-204ENST00000399084 ERCC6Q03468 1493 aa26.12■■□□□ 1.77
HLA-DQB1-204ENST00000399084 CCDC18Q5T9S5 1454 aa26.12■■□□□ 1.77
HLA-DQB1-204ENST00000399084 UGGT2Q9NYU1 1516 aa26.1■■□□□ 1.77
HLA-DQB1-204ENST00000399084 MTUS2Q5JR59 1369 aa26.09■■□□□ 1.77
HLA-DQB1-204ENST00000399084 DIEXFQ68CQ4 756 aaKnown RBP26.08■■□□□ 1.77
HLA-DQB1-204ENST00000399084 SETD5Q9C0A6 1442 aa26.08■■□□□ 1.77
HLA-DQB1-204ENST00000399084 KIAA0586Q9BVV6 1533 aa26.07■■□□□ 1.76
HLA-DQB1-204ENST00000399084 ZNF608Q9ULD9 1512 aaPredicted RBP26.05■■□□□ 1.76
HLA-DQB1-204ENST00000399084 MAGI1Q96QZ7 1491 aaPredicted RBP26.04■■□□□ 1.76
HLA-DQB1-204ENST00000399084 EHBP1L1Q8N3D4 1523 aa26.04■■□□□ 1.76
HLA-DQB1-204ENST00000399084 HECW1Q76N89 1606 aa26.02■■□□□ 1.76
HLA-DQB1-204ENST00000399084 RAB3GAP2Q9H2M9 1393 aa26.02■■□□□ 1.76
HLA-DQB1-204ENST00000399084 FGD6Q6ZV73 1430 aa26.02■■□□□ 1.76
HLA-DQB1-204ENST00000399084 EIF4G3O43432 1585 aaKnown RBP26■■□□□ 1.75
HLA-DQB1-204ENST00000399084 FAM50AQ14320 339 aaKnown RBP26■■□□□ 1.75
HLA-DQB1-204ENST00000399084 SUPT6HQ7KZ85 1726 aaKnown RBP25.99■■□□□ 1.75
HLA-DQB1-204ENST00000399084 GRIN2AQ12879 1464 aa25.98■■□□□ 1.75
HLA-DQB1-204ENST00000399084 ITGAEP38570 1179 aa25.96■■□□□ 1.75
HLA-DQB1-204ENST00000399084 MYOM3Q5VTT5 1437 aa25.95■■□□□ 1.74
HLA-DQB1-204ENST00000399084 LRRIQ1Q96JM4 1722 aa25.95■■□□□ 1.74
HLA-DQB1-204ENST00000399084 NCOA2Q15596 1464 aa25.94■■□□□ 1.74
HLA-DQB1-204ENST00000399084 ARHGEF11O15085 1522 aa25.93■■□□□ 1.74
HLA-DQB1-204ENST00000399084 SYNJ2O15056 1496 aa25.91■■□□□ 1.74
HLA-DQB1-204ENST00000399084 EPRSP07814 1512 aaKnown RBP25.89■■□□□ 1.74
HLA-DQB1-204ENST00000399084 TIMELESSQ9UNS1 1208 aa25.89■■□□□ 1.74
HLA-DQB1-204ENST00000399084 KIAA0556O60303 1618 aa25.87■■□□□ 1.73
HLA-DQB1-204ENST00000399084 DISP1Q96F81 1524 aa25.84■■□□□ 1.73
HLA-DQB1-204ENST00000399084 MIA2Q96PC5 1412 aa25.83■■□□□ 1.73
HLA-DQB1-204ENST00000399084 ACIN1Q9UKV3 1341 aaKnown RBP25.82■■□□□ 1.72
HLA-DQB1-204ENST00000399084 CHMP7Q8WUX9 453 aaPredicted RBP25.82■■□□□ 1.72
HLA-DQB1-204ENST00000399084 TCOF1Q13428 1488 aaKnown RBP25.81■■□□□ 1.72
HLA-DQB1-204ENST00000399084 HFM1A2PYH4 1435 aa25.81■■□□□ 1.72
HLA-DQB1-204ENST00000399084 MAPKBP1O60336 1514 aa25.81■■□□□ 1.72
HLA-DQB1-204ENST00000399084 NUP160Q12769 1436 aa25.79■■□□□ 1.72
HLA-DQB1-204ENST00000399084 CDK11AQ9UQ88 783 aaPredicted RBP25.77■■□□□ 1.72
HLA-DQB1-204ENST00000399084 MAGI3Q5TCQ9 1506 aa25.77■■□□□ 1.72
HLA-DQB1-204ENST00000399084 PTPN23Q9H3S7 1636 aa25.77■■□□□ 1.72
HLA-DQB1-204ENST00000399084 CARMIL2Q6F5E8 1435 aa25.75■■□□□ 1.71
HLA-DQB1-204ENST00000399084 AKNAQ7Z591 1439 aa25.73■■□□□ 1.71
HLA-DQB1-204ENST00000399084 RAPGEF6Q8TEU7 1601 aa25.73■■□□□ 1.71
HLA-DQB1-204ENST00000399084 CEP170Q5SW79 1584 aa25.72■■□□□ 1.71
HLA-DQB1-204ENST00000399084 UACAQ9BZF9 1416 aa25.69■■□□□ 1.7
HLA-DQB1-204ENST00000399084 NUP153P49790 1475 aaKnown RBP25.67■■□□□ 1.7
HLA-DQB1-204ENST00000399084 CDK13Q14004 1512 aaKnown RBP25.67■■□□□ 1.7
HLA-DQB1-204ENST00000399084 NAIPQ13075 1403 aa25.66■■□□□ 1.7
HLA-DQB1-204ENST00000399084 PTPRKQ15262 1439 aa25.66■■□□□ 1.7
HLA-DQB1-204ENST00000399084 CENPBP07199 599 aaPredicted RBP25.64■■□□□ 1.7
HLA-DQB1-204ENST00000399084 JPH4Q96JJ6 628 aa25.64■■□□□ 1.7
HLA-DQB1-204ENST00000399084 TROQ12816 1431 aaPredicted RBP25.57■■□□□ 1.68
HLA-DQB1-204ENST00000399084 GCC2Q8IWJ2 1684 aa25.56■■□□□ 1.68
HLA-DQB1-204ENST00000399084 FBLN2P98095 1184 aa25.56■■□□□ 1.68
HLA-DQB1-204ENST00000399084 ROCK1Q13464 1354 aa25.56■■□□□ 1.68
HLA-DQB1-204ENST00000399084 ADCY10Q96PN6 1610 aa25.5■■□□□ 1.67
HLA-DQB1-204ENST00000399084 ABCA8O94911 1581 aa25.47■■□□□ 1.67
HLA-DQB1-204ENST00000399084 MIER1Q8N108 512 aa25.47■■□□□ 1.67
HLA-DQB1-204ENST00000399084 ITSN2Q9NZM3 1697 aa25.47■■□□□ 1.67
HLA-DQB1-204ENST00000399084 PPP1R15AO75807 674 aaPredicted RBP25.46■■□□□ 1.67
HLA-DQB1-204ENST00000399084 SIN3AQ96ST3 1273 aa25.46■■□□□ 1.67
HLA-DQB1-204ENST00000399084 PLB1Q6P1J6 1458 aa25.46■■□□□ 1.67
HLA-DQB1-204ENST00000399084 DNMT1P26358 1616 aaKnown RBP25.46■■□□□ 1.67
HLA-DQB1-204ENST00000399084 DAPK1P53355 1430 aa25.44■■□□□ 1.66
HLA-DQB1-204ENST00000399084 NEUROD1Q13562 356 aa25.43■■□□□ 1.66
HLA-DQB1-204ENST00000399084 TONSLQ96HA7 1378 aa25.4■■□□□ 1.66
HLA-DQB1-204ENST00000399084 PLEKHD1A6NEE1 506 aa25.39■■□□□ 1.65
HLA-DQB1-204ENST00000399084 ABCC5O15440 1437 aa25.39■■□□□ 1.65
HLA-DQB1-204ENST00000399084 PRG4Q92954 1404 aaPredicted RBP25.39■■□□□ 1.65
HLA-DQB1-204ENST00000399084 RRP7BPQ9NSQ0 103 aa25.37■■□□□ 1.65
HLA-DQB1-204ENST00000399084 GPATCH8Q9UKJ3 1502 aaKnown RBP25.37■■□□□ 1.65
HLA-DQB1-204ENST00000399084 ARID3CA6NKF2 412 aa25.37■■□□□ 1.65
HLA-DQB1-204ENST00000399084 CFDP1Q9UEE9 299 aaPredicted RBP25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms