RNA–Protein interactions for RNA: ENST00000398870.7

PIK3C3-202, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

TSL 2 BASIC

Gene PIK3C3, Length 9,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3-202ENST00000398870 CHAF1AQ13111 956 aaPredicted RBP9.05□□□□□ -0.96
PIK3C3-202ENST00000398870 DNTTIP2Q5QJE6 756 aaKnown RBP9.05□□□□□ -0.96
PIK3C3-202ENST00000398870 BECN1Q14457 450 aa9.05□□□□□ -0.96
PIK3C3-202ENST00000398870 TAOK2Q9UL54 1235 aa9.03□□□□□ -0.96
PIK3C3-202ENST00000398870 FGD1P98174 961 aa9.02□□□□□ -0.96
PIK3C3-202ENST00000398870 FKBP8Q14318 412 aa9.01□□□□□ -0.97
PIK3C3-202ENST00000398870 PNNQ9H307 717 aaKnown RBP9□□□□□ -0.97
PIK3C3-202ENST00000398870 NAP1L2Q9ULW6 460 aaPredicted RBP8.99□□□□□ -0.97
PIK3C3-202ENST00000398870 TPRNQ4KMQ1 711 aa8.98□□□□□ -0.97
PIK3C3-202ENST00000398870 OS9Q13438 667 aaPredicted RBP8.98□□□□□ -0.97
PIK3C3-202ENST00000398870 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.98□□□□□ -0.979e-7■■□□□ 12.6
PIK3C3-202ENST00000398870 GNL2Q13823 731 aaKnown RBP8.97□□□□□ -0.97
PIK3C3-202ENST00000398870 TONSLQ96HA7 1378 aa8.97□□□□□ -0.97
PIK3C3-202ENST00000398870 CNKSR2Q8WXI2 1034 aa8.97□□□□□ -0.97
PIK3C3-202ENST00000398870 LMOD2Q6P5Q4 547 aa8.96□□□□□ -0.98
PIK3C3-202ENST00000398870 A0A0U1RQG5 324 aaPredicted RBP8.96□□□□□ -0.98
PIK3C3-202ENST00000398870 KCNJ4P48050 445 aa8.95□□□□□ -0.98
PIK3C3-202ENST00000398870 DDRGK1Q96HY6 314 aa8.94□□□□□ -0.98
PIK3C3-202ENST00000398870 DCAF8L1A6NGE4 600 aa8.94□□□□□ -0.98
PIK3C3-202ENST00000398870 TMC1Q8TDI8 760 aa8.94□□□□□ -0.98
PIK3C3-202ENST00000398870 FTSJ3Q8IY81 847 aaKnown RBP8.93□□□□□ -0.98
PIK3C3-202ENST00000398870 CCDC136Q96JN2 1154 aa8.93□□□□□ -0.98
PIK3C3-202ENST00000398870 NBR1Q14596 966 aa8.92□□□□□ -0.98
PIK3C3-202ENST00000398870 G3V3G9 751 aa8.92□□□□□ -0.98
PIK3C3-202ENST00000398870 DCAF8Q5TAQ9 597 aa8.92□□□□□ -0.98
PIK3C3-202ENST00000398870 CFAP53Q96M91 514 aa8.91□□□□□ -0.98
PIK3C3-202ENST00000398870 SALL2Q9Y467 1007 aaPredicted RBP8.91□□□□□ -0.98
PIK3C3-202ENST00000398870 GOLGA6L4A6NEF3 574 aa8.91□□□□□ -0.98
PIK3C3-202ENST00000398870 SENP3Q9H4L4 574 aaPredicted RBP8.9□□□□□ -0.99
PIK3C3-202ENST00000398870 CEP89Q96ST8 783 aa8.89□□□□□ -0.99
PIK3C3-202ENST00000398870 PLCB2Q00722 1185 aa8.89□□□□□ -0.99
PIK3C3-202ENST00000398870 CHMP4BQ9H444 224 aaKnown RBP8.88□□□□□ -0.99
PIK3C3-202ENST00000398870 USP35Q9P2H5 1018 aa8.88□□□□□ -0.99
PIK3C3-202ENST00000398870 P3H3Q8IVL6 736 aa8.88□□□□□ -0.99
PIK3C3-202ENST00000398870 DRC7Q8IY82 874 aa8.88□□□□□ -0.99
PIK3C3-202ENST00000398870 FAM9BQ8IZU0 186 aa8.88□□□□□ -0.99
PIK3C3-202ENST00000398870 PPM1GO15355 546 aaPredicted RBP8.87□□□□□ -0.99
PIK3C3-202ENST00000398870 PDE4CQ08493 712 aa8.87□□□□□ -0.99
PIK3C3-202ENST00000398870 HNRNPUQ00839 825 aaKnown RBP eCLIP8.86□□□□□ -0.99
PIK3C3-202ENST00000398870 GTF3C3Q9Y5Q9 886 aa8.86□□□□□ -0.99
PIK3C3-202ENST00000398870 TCEAL9Q9UHQ7 104 aa8.85□□□□□ -0.99
PIK3C3-202ENST00000398870 FBXO3Q9UK99 471 aa8.85□□□□□ -0.99
PIK3C3-202ENST00000398870 MAPK8IP3Q9UPT6 1336 aa8.85□□□□□ -0.99
PIK3C3-202ENST00000398870 PABPN1Q86U42 306 aaKnown RBP eCLIP8.85□□□□□ -0.99
PIK3C3-202ENST00000398870 GOLGA6L1Q8N7Z2 621 aa8.85□□□□□ -0.99
PIK3C3-202ENST00000398870 MCCP23508 829 aa8.84□□□□□ -0.99
PIK3C3-202ENST00000398870 VPS53Q5VIR6 699 aa8.84□□□□□ -0.99
PIK3C3-202ENST00000398870 ERICH6BQ5W0A0 696 aa8.84□□□□□ -0.99
PIK3C3-202ENST00000398870 LAS1LQ9Y4W2 734 aaKnown RBP8.83□□□□□ -1
PIK3C3-202ENST00000398870 CCDC34Q96HJ3 373 aa8.83□□□□□ -1
PIK3C3-202ENST00000398870 CWC22Q9HCG8 908 aaKnown RBP8.82□□□□□ -1
PIK3C3-202ENST00000398870 TSPY4P0CV99 314 aa8.82□□□□□ -1
PIK3C3-202ENST00000398870 TSPY10P0CW01 314 aa8.82□□□□□ -1
PIK3C3-202ENST00000398870 HSP90AB1P08238 724 aaKnown RBP8.81□□□□□ -1
PIK3C3-202ENST00000398870 KDM2AQ9Y2K7 1162 aa8.81□□□□□ -1
PIK3C3-202ENST00000398870 ABCC9O60706 1549 aa8.81□□□□□ -1
PIK3C3-202ENST00000398870 CALRP27797 417 aaKnown RBP8.81□□□□□ -1
PIK3C3-202ENST00000398870 TRHP20396 242 aaPredicted RBP8.8□□□□□ -1
PIK3C3-202ENST00000398870 CDCA8Q53HL2 280 aa8.8□□□□□ -1
PIK3C3-202ENST00000398870 TPM4P67936 248 aa8.8□□□□□ -1
PIK3C3-202ENST00000398870 NAP1L5Q96NT1 182 aaPredicted RBP8.8□□□□□ -1
PIK3C3-202ENST00000398870 CCDC9Q9Y3X0 531 aaKnown RBP8.79□□□□□ -1
PIK3C3-202ENST00000398870 PPP4R2Q9NY27 417 aa8.79□□□□□ -1
PIK3C3-202ENST00000398870 RASSF8Q8NHQ8 419 aa8.79□□□□□ -1
PIK3C3-202ENST00000398870 POGKQ9P215 609 aa8.79□□□□□ -1
PIK3C3-202ENST00000398870 CTDP1Q9Y5B0 961 aaPredicted RBP8.78□□□□□ -1
PIK3C3-202ENST00000398870 LOC105371045A0A1W2PR82 267 aa8.78□□□□□ -1
PIK3C3-202ENST00000398870 SETQ01105 290 aaPredicted RBP8.78□□□□□ -1
PIK3C3-202ENST00000398870 NUDCQ9Y266 331 aa8.78□□□□□ -1
PIK3C3-202ENST00000398870 HTATSF1O43719 755 aaKnown RBP8.77□□□□□ -1.01
PIK3C3-202ENST00000398870 HDGFP51858 240 aaKnown RBP8.77□□□□□ -1.01
PIK3C3-202ENST00000398870 AMER1Q5JTC6 1135 aaPredicted RBP8.77□□□□□ -1.01
PIK3C3-202ENST00000398870 TRIM34Q9BYJ4 488 aa8.77□□□□□ -1.01
PIK3C3-202ENST00000398870 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.76□□□□□ -1.01
PIK3C3-202ENST00000398870 KNSTRNQ9Y448 316 aa8.76□□□□□ -1.01
PIK3C3-202ENST00000398870 MS4A1P11836 297 aa8.76□□□□□ -1.01
PIK3C3-202ENST00000398870 CFAP44Q96MT7 982 aa8.76□□□□□ -1.01
PIK3C3-202ENST00000398870 MSNP26038 577 aaKnown RBP8.76□□□□□ -1.01
PIK3C3-202ENST00000398870 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.76□□□□□ -1.013e-6■■■■■ 28.8
PIK3C3-202ENST00000398870 CHMP7Q8WUX9 453 aaPredicted RBP8.75□□□□□ -1.01
PIK3C3-202ENST00000398870 KIAA1211Q6ZU35 1233 aa8.75□□□□□ -1.01
PIK3C3-202ENST00000398870 MARCH6O60337 910 aa8.75□□□□□ -1.01
PIK3C3-202ENST00000398870 GPATCH3Q96I76 525 aa8.74□□□□□ -1.01
PIK3C3-202ENST00000398870 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.74□□□□□ -1.01
PIK3C3-202ENST00000398870 MRS2Q9HD23 443 aa8.74□□□□□ -1.01
PIK3C3-202ENST00000398870 ANO8Q9HCE9 1232 aaPredicted RBP8.74□□□□□ -1.01
PIK3C3-202ENST00000398870 AEBP2Q6ZN18 517 aaPredicted RBP8.73□□□□□ -1.01
PIK3C3-202ENST00000398870 ZNF330Q9Y3S2 320 aaPredicted RBP8.73□□□□□ -1.01
PIK3C3-202ENST00000398870 TNNT3P45378 269 aaPredicted RBP8.73□□□□□ -1.01
PIK3C3-202ENST00000398870 GORABQ5T7V8 394 aa8.73□□□□□ -1.01
PIK3C3-202ENST00000398870 TAF7LQ5H9L4 462 aa8.72□□□□□ -1.01
PIK3C3-202ENST00000398870 RTF1Q92541 710 aaKnown RBP8.72□□□□□ -1.01
PIK3C3-202ENST00000398870 HSCBQ8IWL3 235 aa8.72□□□□□ -1.01
PIK3C3-202ENST00000398870 FOXD1Q16676 465 aa8.71□□□□□ -1.01
PIK3C3-202ENST00000398870 MEX3CQ5U5Q3 659 aaKnown RBP8.71□□□□□ -1.01
PIK3C3-202ENST00000398870 CSB-PGBD3P0DP91 1061 aa8.71□□□□□ -1.01
PIK3C3-202ENST00000398870 ACIN1Q9UKV3 1341 aaKnown RBP8.71□□□□□ -1.01
PIK3C3-202ENST00000398870 TPM3P06753 285 aa8.71□□□□□ -1.01
PIK3C3-202ENST00000398870 RRP12Q5JTH9 1297 aaKnown RBP8.71□□□□□ -1.02
PIK3C3-202ENST00000398870 TPM2P07951 284 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms