RNA–Protein interactions for RNA: ENST00000398548.5

PRDM15-202, Transcript of PR/SET domain 15, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM15, Length 6,654 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-202ENST00000398548 CDK11BP21127 795 aaKnown RBP13.89□□□□□ -0.19
PRDM15-202ENST00000398548 ARXQ96QS3 562 aa13.88□□□□□ -0.19
PRDM15-202ENST00000398548 MYH16Q9H6N6 1097 aa13.87□□□□□ -0.19
PRDM15-202ENST00000398548 ZBTB7CA1YPR0 619 aa13.84□□□□□ -0.19
PRDM15-202ENST00000398548 RSF1Q96T23 1441 aaPredicted RBP13.83□□□□□ -0.2
PRDM15-202ENST00000398548 GLIPR1L2Q4G1C9 344 aa13.83□□□□□ -0.2
PRDM15-202ENST00000398548 SENP3Q9H4L4 574 aaPredicted RBP13.82□□□□□ -0.2
PRDM15-202ENST00000398548 GOLGA3Q08378 1498 aa13.82□□□□□ -0.2
PRDM15-202ENST00000398548 CCDC180Q9P1Z9 1646 aa13.81□□□□□ -0.2
PRDM15-202ENST00000398548 KCNH8Q96L42 1107 aa13.81□□□□□ -0.2
PRDM15-202ENST00000398548 CEP162Q5TB80 1403 aa13.8□□□□□ -0.2
PRDM15-202ENST00000398548 C14orf37Q86TY3 774 aa13.8□□□□□ -0.2
PRDM15-202ENST00000398548 PLEKHD1A6NEE1 506 aa13.79□□□□□ -0.2
PRDM15-202ENST00000398548 RGL3Q3MIN7 710 aa13.79□□□□□ -0.2
PRDM15-202ENST00000398548 EEA1Q15075 1411 aa13.79□□□□□ -0.2
PRDM15-202ENST00000398548 PPP1R15AO75807 674 aaPredicted RBP13.78□□□□□ -0.2
PRDM15-202ENST00000398548 DDRGK1Q96HY6 314 aa13.77□□□□□ -0.21
PRDM15-202ENST00000398548 PLEKHG5O94827 1062 aa13.76□□□□□ -0.21
PRDM15-202ENST00000398548 BECN1Q14457 450 aa13.76□□□□□ -0.21
PRDM15-202ENST00000398548 MYO15BQ96JP2 1530 aa13.75□□□□□ -0.21
PRDM15-202ENST00000398548 CFAP53Q96M91 514 aa13.73□□□□□ -0.21
PRDM15-202ENST00000398548 RB1CC1Q8TDY2 1594 aa13.73□□□□□ -0.21
PRDM15-202ENST00000398548 NCLP19338 710 aaKnown RBP13.73□□□□□ -0.21
PRDM15-202ENST00000398548 KNSTRNQ9Y448 316 aa13.72□□□□□ -0.21
PRDM15-202ENST00000398548 CDCA8Q53HL2 280 aa13.72□□□□□ -0.21
PRDM15-202ENST00000398548 SENP3-EIF4A1A0A087X0R7 540 aa13.72□□□□□ -0.21
PRDM15-202ENST00000398548 HAP1P54257 671 aaPredicted RBP13.72□□□□□ -0.21
PRDM15-202ENST00000398548 CFDP1Q9UEE9 299 aaPredicted RBP13.71□□□□□ -0.21
PRDM15-202ENST00000398548 WRNQ14191 1432 aaPredicted RBP eCLIP13.71□□□□□ -0.22
PRDM15-202ENST00000398548 CARD11Q9BXL7 1154 aa13.7□□□□□ -0.22
PRDM15-202ENST00000398548 SUPT16HQ9Y5B9 1047 aaKnown RBP13.69□□□□□ -0.22
PRDM15-202ENST00000398548 KIF27Q86VH2 1401 aa13.67□□□□□ -0.22
PRDM15-202ENST00000398548 PPM1GO15355 546 aaPredicted RBP13.67□□□□□ -0.22
PRDM15-202ENST00000398548 GOLGA6L22H0YM25 854 aa13.67□□□□□ -0.22
PRDM15-202ENST00000398548 TNIKQ9UKE5 1360 aa13.66□□□□□ -0.22
PRDM15-202ENST00000398548 FTSJ3Q8IY81 847 aaKnown RBP13.66□□□□□ -0.22
PRDM15-202ENST00000398548 ANP32EQ9BTT0 268 aa13.66□□□□□ -0.22
PRDM15-202ENST00000398548 TRIM44Q96DX7 344 aaPredicted RBP13.66□□□□□ -0.22
PRDM15-202ENST00000398548 CEP164Q9UPV0 1460 aa13.65□□□□□ -0.22
PRDM15-202ENST00000398548 BAZ1BQ9UIG0 1483 aaKnown RBP13.65□□□□□ -0.22
PRDM15-202ENST00000398548 ARID4BQ4LE39 1312 aaPredicted RBP13.63□□□□□ -0.23
PRDM15-202ENST00000398548 CASC1Q6TDU7 716 aa13.63□□□□□ -0.23
PRDM15-202ENST00000398548 NEUROD2Q15784 382 aa13.63□□□□□ -0.23
PRDM15-202ENST00000398548 SIN3AQ96ST3 1273 aa13.62□□□□□ -0.23
PRDM15-202ENST00000398548 ZRSR1Q15695 479 aaKnown RBP13.62□□□□□ -0.23
PRDM15-202ENST00000398548 LAS1LQ9Y4W2 734 aaKnown RBP13.62□□□□□ -0.23
PRDM15-202ENST00000398548 MAPK8IP3Q9UPT6 1336 aa13.61□□□□□ -0.23
PRDM15-202ENST00000398548 NUDCQ9Y266 331 aa13.59□□□□□ -0.23
PRDM15-202ENST00000398548 TULP1O00294 542 aaPredicted RBP13.58□□□□□ -0.23
PRDM15-202ENST00000398548 PPP4R2Q9NY27 417 aa13.58□□□□□ -0.24
PRDM15-202ENST00000398548 POGKQ9P215 609 aa13.58□□□□□ -0.24
PRDM15-202ENST00000398548 CC2D1BQ5T0F9 858 aaKnown RBP13.57□□□□□ -0.24
PRDM15-202ENST00000398548 FRAT1Q92837 279 aaPredicted RBP13.56□□□□□ -0.24
PRDM15-202ENST00000398548 TNNT2P45379 298 aaPredicted RBP13.56□□□□□ -0.24
PRDM15-202ENST00000398548 PTMAP06454 111 aaKnown RBP13.55□□□□□ -0.24
PRDM15-202ENST00000398548 NPHP1O15259 732 aa13.55□□□□□ -0.24
PRDM15-202ENST00000398548 RGS3P49796 1198 aa13.55□□□□□ -0.24
PRDM15-202ENST00000398548 NACADO15069 1562 aa13.55□□□□□ -0.24
PRDM15-202ENST00000398548 TPRNQ4KMQ1 711 aa13.54□□□□□ -0.24
PRDM15-202ENST00000398548 CCNB3Q8WWL7 1395 aa13.52□□□□□ -0.24
PRDM15-202ENST00000398548 U2SURPO15042 1029 aaKnown RBP13.51□□□□□ -0.25
PRDM15-202ENST00000398548 CHMP4BQ9H444 224 aaKnown RBP13.51□□□□□ -0.25
PRDM15-202ENST00000398548 LMOD2Q6P5Q4 547 aa13.5□□□□□ -0.25
PRDM15-202ENST00000398548 FHAD1B1AJZ9 1412 aa13.5□□□□□ -0.25
PRDM15-202ENST00000398548 TMF1P82094 1093 aa13.5□□□□□ -0.25
PRDM15-202ENST00000398548 DCAF11Q8TEB1 546 aa13.5□□□□□ -0.25
PRDM15-202ENST00000398548 MS4A1P11836 297 aa13.5□□□□□ -0.25
PRDM15-202ENST00000398548 PNNQ9H307 717 aaKnown RBP13.49□□□□□ -0.25
PRDM15-202ENST00000398548 DNTTIP2Q5QJE6 756 aaKnown RBP13.49□□□□□ -0.25
PRDM15-202ENST00000398548 ERCC6Q03468 1493 aa13.48□□□□□ -0.25
PRDM15-202ENST00000398548 B4GALNT3Q6L9W6 998 aa13.48□□□□□ -0.25
PRDM15-202ENST00000398548 NOP58Q9Y2X3 529 aaKnown RBP13.47□□□□□ -0.25
PRDM15-202ENST00000398548 HSP90AB1P08238 724 aaKnown RBP13.47□□□□□ -0.25
PRDM15-202ENST00000398548 OS9Q13438 667 aaPredicted RBP13.47□□□□□ -0.25
PRDM15-202ENST00000398548 EIF4G1Q04637 1599 aaKnown RBP13.46□□□□□ -0.25
PRDM15-202ENST00000398548 BAZ1AQ9NRL2 1556 aaPredicted RBP13.45□□□□□ -0.26
PRDM15-202ENST00000398548 KANK1Q14678 1352 aa13.45□□□□□ -0.26
PRDM15-202ENST00000398548 CARMIL1Q5VZK9 1371 aa13.44□□□□□ -0.26
PRDM15-202ENST00000398548 ERICH6BQ5W0A0 696 aa13.44□□□□□ -0.26
PRDM15-202ENST00000398548 TAOK2Q9UL54 1235 aa13.44□□□□□ -0.26
PRDM15-202ENST00000398548 GOLGA2Q08379 1002 aa13.44□□□□□ -0.26
PRDM15-202ENST00000398548 GOLGA6L6A8MZA4 724 aa13.43□□□□□ -0.26
PRDM15-202ENST00000398548 TIMELESSQ9UNS1 1208 aa13.43□□□□□ -0.26
PRDM15-202ENST00000398548 PLCB2Q00722 1185 aa13.42□□□□□ -0.26
PRDM15-202ENST00000398548 FGD1P98174 961 aa13.42□□□□□ -0.26
PRDM15-202ENST00000398548 CUX2O14529 1486 aa13.42□□□□□ -0.26
PRDM15-202ENST00000398548 KCNJ4P48050 445 aa13.41□□□□□ -0.26
PRDM15-202ENST00000398548 SRPK2P78362 688 aaKnown RBP13.41□□□□□ -0.26
PRDM15-202ENST00000398548 SETD5Q9C0A6 1442 aa13.4□□□□□ -0.26
PRDM15-202ENST00000398548 MORC1Q86VD1 984 aa13.4□□□□□ -0.26
PRDM15-202ENST00000398548 SOGA1O94964 1423 aa13.4□□□□□ -0.26
PRDM15-202ENST00000398548 CCER2I3L3R5 266 aa13.4□□□□□ -0.26
PRDM15-202ENST00000398548 NAP1L2Q9ULW6 460 aaPredicted RBP13.4□□□□□ -0.27
PRDM15-202ENST00000398548 HSPA5P11021 654 aaKnown RBP13.39□□□□□ -0.27
PRDM15-202ENST00000398548 NAP1L5Q96NT1 182 aaPredicted RBP13.39□□□□□ -0.27
PRDM15-202ENST00000398548 HSCBQ8IWL3 235 aa13.38□□□□□ -0.27
PRDM15-202ENST00000398548 ARHGAP35Q9NRY4 1499 aa13.38□□□□□ -0.27
PRDM15-202ENST00000398548 SOX12O15370 315 aa13.38□□□□□ -0.27
PRDM15-202ENST00000398548 HDGFP51858 240 aaKnown RBP13.38□□□□□ -0.27
PRDM15-202ENST00000398548 SAFB2Q14151 953 aaKnown RBP eCLIP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms