RNA–Protein interactions for RNA: ENST00000398229.7

PDE9A-210, Transcript of phosphodiesterase 9A, humanhuman

TSL 1 (best) BASIC

Gene PDE9A, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE9A-210ENST00000398229 CEP162Q5TB80 1403 aa15.22■□□□□ 0.03
PDE9A-210ENST00000398229 PDIA4P13667 645 aaKnown RBP15.19■□□□□ 0.02
PDE9A-210ENST00000398229 TNIKQ9UKE5 1360 aa15.18■□□□□ 0.02
PDE9A-210ENST00000398229 NEFMP07197 916 aa15.17■□□□□ 0.02
PDE9A-210ENST00000398229 SMARCA4P51532 1647 aa15.16■□□□□ 0.02
PDE9A-210ENST00000398229 DHX57Q6P158 1386 aaKnown RBP15.15■□□□□ 0.02
PDE9A-210ENST00000398229 TOP2AP11388 1531 aaKnown RBP15.13■□□□□ 0.01
PDE9A-210ENST00000398229 RBM10P98175 930 aaKnown RBP15.13■□□□□ 0.01
PDE9A-210ENST00000398229 GSE1Q14687 1217 aa15.13■□□□□ 0.01
PDE9A-210ENST00000398229 TIMELESSQ9UNS1 1208 aa15.12■□□□□ 0.01
PDE9A-210ENST00000398229 KCNH8Q96L42 1107 aa15.12■□□□□ 0.01
PDE9A-210ENST00000398229 RANGAP1P46060 587 aaPredicted RBP15.11■□□□□ 0.01
PDE9A-210ENST00000398229 HSP90AA2PQ14568 343 aaPredicted RBP15.11■□□□□ 0.01
PDE9A-210ENST00000398229 CENPJQ9HC77 1338 aaPredicted RBP15.1■□□□□ 0.01
PDE9A-210ENST00000398229 EIF4G1Q04637 1599 aaKnown RBP15.1■□□□□ 0.01
PDE9A-210ENST00000398229 BRPF3Q9ULD4 1205 aa15.1■□□□□ 0.01
PDE9A-210ENST00000398229 TAF7LQ5H9L4 462 aa15.06■□□□□ 0
PDE9A-210ENST00000398229 NCAPD3P42695 1498 aa15.05■□□□□ 0
PDE9A-210ENST00000398229 CUX2O14529 1486 aa15.03■□□□□ -0
PDE9A-210ENST00000398229 BICRAQ9NZM4 1560 aa15.03■□□□□ -0
PDE9A-210ENST00000398229 HSP90AA1P07900 732 aaKnown RBP15.02□□□□□ -0.01
PDE9A-210ENST00000398229 CALD1Q05682 793 aaKnown RBP15.02□□□□□ -0.01
PDE9A-210ENST00000398229 PEG3Q9GZU2 1588 aa15□□□□□ -0.01
PDE9A-210ENST00000398229 ANP32CO43423 234 aa15□□□□□ -0.01
PDE9A-210ENST00000398229 PPP1R15AO75807 674 aaPredicted RBP15□□□□□ -0.01
PDE9A-210ENST00000398229 ARXQ96QS3 562 aa15□□□□□ -0.01
PDE9A-210ENST00000398229 ZNF326Q5BKZ1 582 aaKnown RBP14.98□□□□□ -0.01
PDE9A-210ENST00000398229 SMARCA2P51531 1590 aa14.98□□□□□ -0.01
PDE9A-210ENST00000398229 HNRNPUL2Q1KMD3 747 aaKnown RBP14.97□□□□□ -0.01
PDE9A-210ENST00000398229 TRIM52Q96A61 297 aa14.97□□□□□ -0.01
PDE9A-210ENST00000398229 A0A0U1RQG5 324 aaPredicted RBP14.97□□□□□ -0.01
PDE9A-210ENST00000398229 NCBP3Q53F19 620 aaKnown RBP14.97□□□□□ -0.01
PDE9A-210ENST00000398229 CCDC88BA6NC98 1476 aa14.93□□□□□ -0.02
PDE9A-210ENST00000398229 DDRGK1Q96HY6 314 aa14.92□□□□□ -0.02
PDE9A-210ENST00000398229 BCL11BQ9C0K0 894 aaPredicted RBP14.9□□□□□ -0.02
PDE9A-210ENST00000398229 PDCL3Q9H2J4 239 aa14.88□□□□□ -0.03
PDE9A-210ENST00000398229 PRDM4Q9UKN5 801 aa14.88□□□□□ -0.03
PDE9A-210ENST00000398229 FRAT1Q92837 279 aaPredicted RBP14.87□□□□□ -0.03
PDE9A-210ENST00000398229 EHMT2Q96KQ7 1210 aa14.87□□□□□ -0.03
PDE9A-210ENST00000398229 CEP164Q9UPV0 1460 aa14.86□□□□□ -0.03
PDE9A-210ENST00000398229 NCLP19338 710 aaKnown RBP14.86□□□□□ -0.03
PDE9A-210ENST00000398229 PHF23Q9BUL5 403 aaPredicted RBP14.86□□□□□ -0.03
PDE9A-210ENST00000398229 GOLGA3Q08378 1498 aa14.86□□□□□ -0.03
PDE9A-210ENST00000398229 CLCN1P35523 988 aa14.85□□□□□ -0.03
PDE9A-210ENST00000398229 B4GALNT3Q6L9W6 998 aa14.85□□□□□ -0.03
PDE9A-210ENST00000398229 PABPN1Q86U42 306 aaKnown RBP eCLIP14.85□□□□□ -0.03
PDE9A-210ENST00000398229 DDX10Q13206 875 aaKnown RBP14.84□□□□□ -0.03
PDE9A-210ENST00000398229 VPS8Q8N3P4 1428 aa14.84□□□□□ -0.03
PDE9A-210ENST00000398229 PNNQ9H307 717 aaKnown RBP14.84□□□□□ -0.03
PDE9A-210ENST00000398229 L1TD1Q5T7N2 865 aaKnown RBP14.83□□□□□ -0.04
PDE9A-210ENST00000398229 MS4A1P11836 297 aa14.82□□□□□ -0.04
PDE9A-210ENST00000398229 TCERG1O14776 1098 aaKnown RBP14.81□□□□□ -0.04
PDE9A-210ENST00000398229 TPM2P07951 284 aa14.81□□□□□ -0.04
PDE9A-210ENST00000398229 HNRNPUQ00839 825 aaKnown RBP eCLIP14.81□□□□□ -0.04
PDE9A-210ENST00000398229 RSPH4AQ5TD94 716 aa14.81□□□□□ -0.04
PDE9A-210ENST00000398229 IRX6P78412 446 aaPredicted RBP14.81□□□□□ -0.04
PDE9A-210ENST00000398229 NFKBIBQ15653 356 aa14.81□□□□□ -0.04
PDE9A-210ENST00000398229 LAS1LQ9Y4W2 734 aaKnown RBP14.81□□□□□ -0.04
PDE9A-210ENST00000398229 NAP1L5Q96NT1 182 aaPredicted RBP14.8□□□□□ -0.04
PDE9A-210ENST00000398229 RRAGDQ9NQL2 400 aaPredicted RBP14.78□□□□□ -0.04
PDE9A-210ENST00000398229 RNF123Q5XPI4 1314 aa14.78□□□□□ -0.04
PDE9A-210ENST00000398229 ZBED9Q6R2W3 1325 aa14.77□□□□□ -0.04
PDE9A-210ENST00000398229 MAP7D2Q96T17 732 aa14.77□□□□□ -0.05
PDE9A-210ENST00000398229 MAPKBP1O60336 1514 aa14.75□□□□□ -0.05
PDE9A-210ENST00000398229 ATAD2BQ9ULI0 1458 aa14.75□□□□□ -0.05
PDE9A-210ENST00000398229 RRBP1Q9P2E9 1410 aaKnown RBP14.75□□□□□ -0.05
PDE9A-210ENST00000398229 WDR97A6NE52 1622 aa14.74□□□□□ -0.05
PDE9A-210ENST00000398229 ABCC8Q09428 1581 aa14.74□□□□□ -0.05
PDE9A-210ENST00000398229 DCAF11Q8TEB1 546 aa14.74□□□□□ -0.05
PDE9A-210ENST00000398229 IPO4Q8TEX9 1081 aaKnown RBP14.74□□□□□ -0.05
PDE9A-210ENST00000398229 KIF21BO75037 1637 aa14.73□□□□□ -0.05
PDE9A-210ENST00000398229 CLIP1P30622 1438 aa14.72□□□□□ -0.05
PDE9A-210ENST00000398229 SMG6Q86US8 1419 aaKnown RBP14.72□□□□□ -0.05
PDE9A-210ENST00000398229 SMAP1Q8IYB5 467 aaPredicted RBP14.71□□□□□ -0.05
PDE9A-210ENST00000398229 BAZ1BQ9UIG0 1483 aaKnown RBP14.7□□□□□ -0.06
PDE9A-210ENST00000398229 NAP1L2Q9ULW6 460 aaPredicted RBP14.7□□□□□ -0.06
PDE9A-210ENST00000398229 KLHL34Q8N239 644 aa14.69□□□□□ -0.06
PDE9A-210ENST00000398229 BACH2Q9BYV9 841 aa14.69□□□□□ -0.06
PDE9A-210ENST00000398229 CANXP27824 592 aaKnown RBP14.67□□□□□ -0.06
PDE9A-210ENST00000398229 CNGB1Q14028 1251 aaPredicted RBP14.67□□□□□ -0.06
PDE9A-210ENST00000398229 TERF1P54274 439 aa14.66□□□□□ -0.06
PDE9A-210ENST00000398229 UTP14CQ5TAP6 766 aaKnown RBP14.66□□□□□ -0.06
PDE9A-210ENST00000398229 PDE4AP27815 886 aa14.65□□□□□ -0.06
PDE9A-210ENST00000398229 BBXQ8WY36 941 aaPredicted RBP14.65□□□□□ -0.06
PDE9A-210ENST00000398229 MTERF4Q7Z6M4 381 aaKnown RBP14.64□□□□□ -0.07
PDE9A-210ENST00000398229 HMGXB3Q12766 1538 aa14.63□□□□□ -0.07
PDE9A-210ENST00000398229 GTF2E1P29083 439 aaPredicted RBP14.63□□□□□ -0.07
PDE9A-210ENST00000398229 RGS3P49796 1198 aa14.61□□□□□ -0.07
PDE9A-210ENST00000398229 VGFO15240 615 aaPredicted RBP14.59□□□□□ -0.07
PDE9A-210ENST00000398229 BRD2P25440 801 aaKnown RBP14.59□□□□□ -0.07
PDE9A-210ENST00000398229 STAC3Q96MF2 364 aa14.59□□□□□ -0.07
PDE9A-210ENST00000398229 NPM2Q86SE8 214 aaKnown RBP14.58□□□□□ -0.08
PDE9A-210ENST00000398229 ARID4BQ4LE39 1312 aaPredicted RBP14.58□□□□□ -0.08
PDE9A-210ENST00000398229 SOGA1O94964 1423 aa14.57□□□□□ -0.08
PDE9A-210ENST00000398229 ISY1Q9ULR0 285 aaKnown RBP14.56□□□□□ -0.08
PDE9A-210ENST00000398229 NCOA2Q15596 1464 aa14.55□□□□□ -0.08
PDE9A-210ENST00000398229 UBTFP17480 764 aaKnown RBP14.55□□□□□ -0.08
PDE9A-210ENST00000398229 SYNJ1O43426 1573 aa14.55□□□□□ -0.08
PDE9A-210ENST00000398229 FHAD1B1AJZ9 1412 aa14.54□□□□□ -0.08
PDE9A-210ENST00000398229 NUDCQ9Y266 331 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms