RNA–Protein interactions for RNA: ENST00000397041.7

ATP2A3-205, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ATP2A3, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-205ENST00000397041 MROH2BQ7Z745 1585 aa21.39■■□□□ 1.01
ATP2A3-205ENST00000397041 KANK4Q5T7N3 995 aaPredicted RBP21.37■■□□□ 1.01
ATP2A3-205ENST00000397041 KDM2AQ9Y2K7 1162 aa21.35■■□□□ 1.01
ATP2A3-205ENST00000397041 TSHZ2Q9NRE2 1034 aa21.32■■□□□ 1
ATP2A3-205ENST00000397041 RBM19Q9Y4C8 960 aaKnown RBP21.31■■□□□ 1
ATP2A3-205ENST00000397041 CCNB3Q8WWL7 1395 aa21.31■■□□□ 1
ATP2A3-205ENST00000397041 VPS8Q8N3P4 1428 aa21.27■■□□□ 1
ATP2A3-205ENST00000397041 B4GALNT3Q6L9W6 998 aa21.27■■□□□ 1
ATP2A3-205ENST00000397041 BAZ1AQ9NRL2 1556 aaPredicted RBP21.26■□□□□ 0.99
ATP2A3-205ENST00000397041 KCNH8Q96L42 1107 aa21.26■□□□□ 0.99
ATP2A3-205ENST00000397041 NACADO15069 1562 aa21.21■□□□□ 0.99
ATP2A3-205ENST00000397041 KIF27Q86VH2 1401 aa21.21■□□□□ 0.99
ATP2A3-205ENST00000397041 PPP4R2Q9NY27 417 aa21.2■□□□□ 0.98
ATP2A3-205ENST00000397041 ARXQ96QS3 562 aa21.17■□□□□ 0.98
ATP2A3-205ENST00000397041 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.17■□□□□ 0.98
ATP2A3-205ENST00000397041 BAZ1BQ9UIG0 1483 aaKnown RBP21.15■□□□□ 0.98
ATP2A3-205ENST00000397041 CCER2I3L3R5 266 aa21.1■□□□□ 0.97
ATP2A3-205ENST00000397041 RUSC2Q8N2Y8 1516 aa21.1■□□□□ 0.97
ATP2A3-205ENST00000397041 WIZO95785 1651 aa21.1■□□□□ 0.97
ATP2A3-205ENST00000397041 RAB3GAP2Q9H2M9 1393 aa21.09■□□□□ 0.97
ATP2A3-205ENST00000397041 LAS1LQ9Y4W2 734 aaKnown RBP21.07■□□□□ 0.96
ATP2A3-205ENST00000397041 NOP58Q9Y2X3 529 aaKnown RBP21.07■□□□□ 0.96
ATP2A3-205ENST00000397041 RTN4Q9NQC3 1192 aaKnown RBP21.06■□□□□ 0.96
ATP2A3-205ENST00000397041 SETD5Q9C0A6 1442 aa21.06■□□□□ 0.96
ATP2A3-205ENST00000397041 WDR43Q15061 677 aaKnown RBP eCLIP21.05■□□□□ 0.96
ATP2A3-205ENST00000397041 TSPY4P0CV99 314 aa21.05■□□□□ 0.96
ATP2A3-205ENST00000397041 TSPY10P0CW01 314 aa21.05■□□□□ 0.96
ATP2A3-205ENST00000397041 RGL3Q3MIN7 710 aa21.04■□□□□ 0.96
ATP2A3-205ENST00000397041 UPF2Q9HAU5 1272 aaKnown RBP21.02■□□□□ 0.96
ATP2A3-205ENST00000397041 DHX57Q6P158 1386 aaKnown RBP21.02■□□□□ 0.95
ATP2A3-205ENST00000397041 CHGAP10645 457 aaKnown RBP21.01■□□□□ 0.95
ATP2A3-205ENST00000397041 HSPA5P11021 654 aaKnown RBP21.01■□□□□ 0.95
ATP2A3-205ENST00000397041 TIMELESSQ9UNS1 1208 aa21.01■□□□□ 0.95
ATP2A3-205ENST00000397041 GOLGA6L2Q8N9W4 650 aaPredicted RBP21■□□□□ 0.95
ATP2A3-205ENST00000397041 DEKP35659 375 aaKnown RBP20.98■□□□□ 0.95
ATP2A3-205ENST00000397041 PPP1R15AO75807 674 aaPredicted RBP20.98■□□□□ 0.95
ATP2A3-205ENST00000397041 FOXD1Q16676 465 aa20.97■□□□□ 0.95
ATP2A3-205ENST00000397041 HSP90AA1P07900 732 aaKnown RBP20.97■□□□□ 0.95
ATP2A3-205ENST00000397041 CARD11Q9BXL7 1154 aa20.97■□□□□ 0.95
ATP2A3-205ENST00000397041 NEFMP07197 916 aa20.95■□□□□ 0.94
ATP2A3-205ENST00000397041 CARMIL1Q5VZK9 1371 aa20.94■□□□□ 0.94
ATP2A3-205ENST00000397041 RAPGEF2Q9Y4G8 1499 aa20.94■□□□□ 0.94
ATP2A3-205ENST00000397041 CUX2O14529 1486 aa20.91■□□□□ 0.94
ATP2A3-205ENST00000397041 SLC24A1O60721 1099 aa20.9■□□□□ 0.94
ATP2A3-205ENST00000397041 CFDP1Q9UEE9 299 aaPredicted RBP20.89■□□□□ 0.93
ATP2A3-205ENST00000397041 FHAD1B1AJZ9 1412 aa20.88■□□□□ 0.93
ATP2A3-205ENST00000397041 DDRGK1Q96HY6 314 aa20.87■□□□□ 0.93
ATP2A3-205ENST00000397041 RGS3P49796 1198 aa20.86■□□□□ 0.93
ATP2A3-205ENST00000397041 PPM1GO15355 546 aaPredicted RBP20.82■□□□□ 0.92
ATP2A3-205ENST00000397041 CC2D1BQ5T0F9 858 aaKnown RBP20.82■□□□□ 0.92
ATP2A3-205ENST00000397041 TOP2AP11388 1531 aaKnown RBP20.81■□□□□ 0.92
ATP2A3-205ENST00000397041 CHMP7Q8WUX9 453 aaPredicted RBP20.81■□□□□ 0.92
ATP2A3-205ENST00000397041 SENP3Q9H4L4 574 aaPredicted RBP20.8■□□□□ 0.92
ATP2A3-205ENST00000397041 ANP32BQ92688 251 aaKnown RBP20.79■□□□□ 0.92
ATP2A3-205ENST00000397041 ARHGAP35Q9NRY4 1499 aa20.78■□□□□ 0.92
ATP2A3-205ENST00000397041 PLEKHD1A6NEE1 506 aa20.76■□□□□ 0.91
ATP2A3-205ENST00000397041 NEUROD2Q15784 382 aa20.75■□□□□ 0.91
ATP2A3-205ENST00000397041 KNSTRNQ9Y448 316 aa20.75■□□□□ 0.91
ATP2A3-205ENST00000397041 DCAF11Q8TEB1 546 aa20.74■□□□□ 0.91
ATP2A3-205ENST00000397041 L3MBTL2Q969R5 705 aa20.74■□□□□ 0.91
ATP2A3-205ENST00000397041 MPHOSPH9Q99550 1183 aa20.72■□□□□ 0.91
ATP2A3-205ENST00000397041 ERICH6BQ5W0A0 696 aa20.72■□□□□ 0.91
ATP2A3-205ENST00000397041 BECN1Q14457 450 aa20.72■□□□□ 0.91
ATP2A3-205ENST00000397041 FRAT1Q92837 279 aaPredicted RBP20.66■□□□□ 0.9
ATP2A3-205ENST00000397041 PKD2Q13563 968 aa20.65■□□□□ 0.9
ATP2A3-205ENST00000397041 GLIPR1L2Q4G1C9 344 aa20.64■□□□□ 0.9
ATP2A3-205ENST00000397041 FHOD3Q2V2M9 1422 aa20.63■□□□□ 0.89
ATP2A3-205ENST00000397041 RCAN3Q9UKA8 241 aa20.63■□□□□ 0.89
ATP2A3-205ENST00000397041 TNNT2P45379 298 aaPredicted RBP20.62■□□□□ 0.89
ATP2A3-205ENST00000397041 NUDCQ9Y266 331 aa20.61■□□□□ 0.89
ATP2A3-205ENST00000397041 IPO9Q96P70 1041 aaKnown RBP20.61■□□□□ 0.89
ATP2A3-205ENST00000397041 STAG3Q9UJ98 1225 aa20.58■□□□□ 0.88
ATP2A3-205ENST00000397041 PRKRIP1Q9H875 184 aaPredicted RBP20.57■□□□□ 0.88
ATP2A3-205ENST00000397041 EIF4G1Q04637 1599 aaKnown RBP20.57■□□□□ 0.88
ATP2A3-205ENST00000397041 FMN1Q68DA7 1419 aa20.56■□□□□ 0.88
ATP2A3-205ENST00000397041 TRIM44Q96DX7 344 aaPredicted RBP20.53■□□□□ 0.88
ATP2A3-205ENST00000397041 TDRD9Q8NDG6 1382 aaKnown RBP20.53■□□□□ 0.88
ATP2A3-205ENST00000397041 CDCA8Q53HL2 280 aa20.53■□□□□ 0.88
ATP2A3-205ENST00000397041 TCERG1O14776 1098 aaKnown RBP20.52■□□□□ 0.88
ATP2A3-205ENST00000397041 FTSJ3Q8IY81 847 aaKnown RBP20.52■□□□□ 0.88
ATP2A3-205ENST00000397041 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.51■□□□□ 0.87
ATP2A3-205ENST00000397041 SMARCA4P51532 1647 aa20.51■□□□□ 0.87
ATP2A3-205ENST00000397041 SPRYD3Q8NCJ5 442 aa20.51■□□□□ 0.87
ATP2A3-205ENST00000397041 TMF1P82094 1093 aa20.5■□□□□ 0.87
ATP2A3-205ENST00000397041 FANCIQ9NVI1 1328 aa20.5■□□□□ 0.87
ATP2A3-205ENST00000397041 KIF21BO75037 1637 aa20.48■□□□□ 0.87
ATP2A3-205ENST00000397041 SMARCA2P51531 1590 aa20.48■□□□□ 0.87
ATP2A3-205ENST00000397041 NCLP19338 710 aaKnown RBP20.47■□□□□ 0.87
ATP2A3-205ENST00000397041 NAP1L5Q96NT1 182 aaPredicted RBP20.47■□□□□ 0.87
ATP2A3-205ENST00000397041 KTN1Q86UP2 1357 aaKnown RBP20.46■□□□□ 0.87
ATP2A3-205ENST00000397041 MYH16Q9H6N6 1097 aa20.45■□□□□ 0.86
ATP2A3-205ENST00000397041 CFAP53Q96M91 514 aa20.45■□□□□ 0.86
ATP2A3-205ENST00000397041 ATAD2BQ9ULI0 1458 aa20.44■□□□□ 0.86
ATP2A3-205ENST00000397041 ZBED9Q6R2W3 1325 aa20.44■□□□□ 0.86
ATP2A3-205ENST00000397041 SLKQ9H2G2 1235 aaPredicted RBP20.43■□□□□ 0.86
ATP2A3-205ENST00000397041 RALBP1Q15311 655 aa20.43■□□□□ 0.86
ATP2A3-205ENST00000397041 PLIN1O60240 522 aa20.43■□□□□ 0.86
ATP2A3-205ENST00000397041 EXOC6Q8TAG9 804 aa20.42■□□□□ 0.86
ATP2A3-205ENST00000397041 PHLDB1Q86UU1 1377 aa20.42■□□□□ 0.86
ATP2A3-205ENST00000397041 NUP155O75694 1391 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms