RNA–Protein interactions for RNA: ENST00000396247.7

RDH13-202, Transcript of retinol dehydrogenase 13, humanhuman

TSL 1 (best) BASIC

Gene RDH13, Length 1,987 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-202ENST00000396247 CTTNBP2Q8WZ74 1663 aa26.26■■□□□ 1.79
RDH13-202ENST00000396247 ADAMTS12P58397 1594 aa26.23■■□□□ 1.79
RDH13-202ENST00000396247 EIF4G3O43432 1585 aaKnown RBP26.22■■□□□ 1.79
RDH13-202ENST00000396247 APLP2Q06481 763 aa26.21■■□□□ 1.79
RDH13-202ENST00000396247 TTBK1Q5TCY1 1321 aaPredicted RBP26.18■■□□□ 1.78
RDH13-202ENST00000396247 EFCAB5A4FU69 1503 aa26.14■■□□□ 1.78
RDH13-202ENST00000396247 SNAPC4Q5SXM2 1469 aa26.13■■□□□ 1.77
RDH13-202ENST00000396247 MAGI1Q96QZ7 1491 aaPredicted RBP26.07■■□□□ 1.76
RDH13-202ENST00000396247 P3H3Q8IVL6 736 aa26.06■■□□□ 1.76
RDH13-202ENST00000396247 FHOD3Q2V2M9 1422 aa26.03■■□□□ 1.76
RDH13-202ENST00000396247 SAMD9Q5K651 1589 aa26■■□□□ 1.75
RDH13-202ENST00000396247 GRIN2AQ12879 1464 aa26■■□□□ 1.75
RDH13-202ENST00000396247 IQGAP2Q13576 1575 aa25.99■■□□□ 1.75
RDH13-202ENST00000396247 SYNJ2O15056 1496 aa25.98■■□□□ 1.75
RDH13-202ENST00000396247 CHMP7Q8WUX9 453 aaPredicted RBP25.94■■□□□ 1.74
RDH13-202ENST00000396247 FMN1Q68DA7 1419 aa25.93■■□□□ 1.74
RDH13-202ENST00000396247 PCF11O94913 1555 aaKnown RBP25.93■■□□□ 1.74
RDH13-202ENST00000396247 KANK4Q5T7N3 995 aaPredicted RBP25.93■■□□□ 1.74
RDH13-202ENST00000396247 MAP3K1Q13233 1512 aa25.92■■□□□ 1.74
RDH13-202ENST00000396247 KIAA0586Q9BVV6 1533 aa25.92■■□□□ 1.74
RDH13-202ENST00000396247 CASKIN1Q8WXD9 1431 aa25.89■■□□□ 1.73
RDH13-202ENST00000396247 FYCO1Q9BQS8 1478 aa25.89■■□□□ 1.73
RDH13-202ENST00000396247 TIAM1Q13009 1591 aa25.88■■□□□ 1.73
RDH13-202ENST00000396247 FBLN2P98095 1184 aa25.86■■□□□ 1.73
RDH13-202ENST00000396247 UGGT2Q9NYU1 1516 aa25.86■■□□□ 1.73
RDH13-202ENST00000396247 ATP1B4Q9UN42 357 aaPredicted RBP25.82■■□□□ 1.72
RDH13-202ENST00000396247 CEP170Q5SW79 1584 aa25.82■■□□□ 1.72
RDH13-202ENST00000396247 CFAP43Q8NDM7 1665 aa25.8■■□□□ 1.72
RDH13-202ENST00000396247 NUP160Q12769 1436 aa25.79■■□□□ 1.72
RDH13-202ENST00000396247 LRRC9Q6ZRR7 1453 aa25.77■■□□□ 1.72
RDH13-202ENST00000396247 DISP1Q96F81 1524 aa25.72■■□□□ 1.71
RDH13-202ENST00000396247 KIAA0556O60303 1618 aa25.72■■□□□ 1.71
RDH13-202ENST00000396247 RRBP1Q9P2E9 1410 aaKnown RBP25.66■■□□□ 1.7
RDH13-202ENST00000396247 JPH4Q96JJ6 628 aa25.63■■□□□ 1.69
RDH13-202ENST00000396247 LRRIQ1Q96JM4 1722 aa25.63■■□□□ 1.69
RDH13-202ENST00000396247 HECW1Q76N89 1606 aa25.63■■□□□ 1.69
RDH13-202ENST00000396247 HNRNPUL2Q1KMD3 747 aaKnown RBP25.62■■□□□ 1.69
RDH13-202ENST00000396247 CHD1O14646 1710 aa25.62■■□□□ 1.69
RDH13-202ENST00000396247 CCDC18Q5T9S5 1454 aa25.6■■□□□ 1.69
RDH13-202ENST00000396247 CARMIL2Q6F5E8 1435 aa25.6■■□□□ 1.69
RDH13-202ENST00000396247 CCNB3Q8WWL7 1395 aa25.59■■□□□ 1.69
RDH13-202ENST00000396247 ZEB1P37275 1124 aaPredicted RBP25.57■■□□□ 1.68
RDH13-202ENST00000396247 MTUS2Q5JR59 1369 aa25.57■■□□□ 1.68
RDH13-202ENST00000396247 PHLDB1Q86UU1 1377 aa25.56■■□□□ 1.68
RDH13-202ENST00000396247 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.55■■□□□ 1.68
RDH13-202ENST00000396247 EPRSP07814 1512 aaKnown RBP25.54■■□□□ 1.68
RDH13-202ENST00000396247 EHBP1L1Q8N3D4 1523 aa25.5■■□□□ 1.67
RDH13-202ENST00000396247 CCER1Q8TC90 406 aaPredicted RBP25.49■■□□□ 1.67
RDH13-202ENST00000396247 RAPGEF6Q8TEU7 1601 aa25.49■■□□□ 1.67
RDH13-202ENST00000396247 CDK13Q14004 1512 aaKnown RBP25.46■■□□□ 1.67
RDH13-202ENST00000396247 PRG4Q92954 1404 aaPredicted RBP25.45■■□□□ 1.66
RDH13-202ENST00000396247 NUP153P49790 1475 aaKnown RBP25.45■■□□□ 1.66
RDH13-202ENST00000396247 MAGI3Q5TCQ9 1506 aa25.44■■□□□ 1.66
RDH13-202ENST00000396247 SUPT6HQ7KZ85 1726 aaKnown RBP25.43■■□□□ 1.66
RDH13-202ENST00000396247 NCOA2Q15596 1464 aa25.42■■□□□ 1.66
RDH13-202ENST00000396247 PLB1Q6P1J6 1458 aa25.41■■□□□ 1.66
RDH13-202ENST00000396247 ARID3CA6NKF2 412 aa25.4■■□□□ 1.66
RDH13-202ENST00000396247 SHROOM2Q13796 1616 aa25.4■■□□□ 1.66
RDH13-202ENST00000396247 FAM50AQ14320 339 aaKnown RBP25.36■■□□□ 1.65
RDH13-202ENST00000396247 FGD6Q6ZV73 1430 aa25.36■■□□□ 1.65
RDH13-202ENST00000396247 ARHGEF11O15085 1522 aa25.36■■□□□ 1.65
RDH13-202ENST00000396247 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.35■■□□□ 1.65
RDH13-202ENST00000396247 ITGAEP38570 1179 aa25.35■■□□□ 1.65
RDH13-202ENST00000396247 MYOM3Q5VTT5 1437 aa25.34■■□□□ 1.65
RDH13-202ENST00000396247 ABCA8O94911 1581 aa25.33■■□□□ 1.65
RDH13-202ENST00000396247 CDK11AQ9UQ88 783 aaPredicted RBP25.33■■□□□ 1.64
RDH13-202ENST00000396247 CLASP1Q7Z460 1538 aa25.32■■□□□ 1.64
RDH13-202ENST00000396247 PTPRGP23470 1445 aa25.32■■□□□ 1.64
RDH13-202ENST00000396247 ERCC6L2Q5T890 1561 aa25.22■■□□□ 1.63
RDH13-202ENST00000396247 TROQ12816 1431 aaPredicted RBP25.22■■□□□ 1.63
RDH13-202ENST00000396247 PTPN23Q9H3S7 1636 aa25.19■■□□□ 1.62
RDH13-202ENST00000396247 ATP10BO94823 1461 aa25.19■■□□□ 1.62
RDH13-202ENST00000396247 MIA2Q96PC5 1412 aa25.18■■□□□ 1.62
RDH13-202ENST00000396247 UACAQ9BZF9 1416 aa25.17■■□□□ 1.62
RDH13-202ENST00000396247 TCOF1Q13428 1488 aaKnown RBP25.16■■□□□ 1.62
RDH13-202ENST00000396247 SETD5Q9C0A6 1442 aa25.14■■□□□ 1.62
RDH13-202ENST00000396247 PLEKHD1A6NEE1 506 aa25.13■■□□□ 1.61
RDH13-202ENST00000396247 RAB3GAP2Q9H2M9 1393 aa25.12■■□□□ 1.61
RDH13-202ENST00000396247 ADCY10Q96PN6 1610 aa25.12■■□□□ 1.61
RDH13-202ENST00000396247 DHX57Q6P158 1386 aaKnown RBP25.11■■□□□ 1.61
RDH13-202ENST00000396247 KIF14Q15058 1648 aa25.08■■□□□ 1.61
RDH13-202ENST00000396247 ABCC2Q92887 1545 aa25.08■■□□□ 1.6
RDH13-202ENST00000396247 PTPRKQ15262 1439 aa25.07■■□□□ 1.6
RDH13-202ENST00000396247 CLSPNQ9HAW4 1339 aa25.05■■□□□ 1.6
RDH13-202ENST00000396247 OSCARQ8IYS5 282 aa25.04■■□□□ 1.6
RDH13-202ENST00000396247 ITSN2Q9NZM3 1697 aa25.02■■□□□ 1.6
RDH13-202ENST00000396247 GPATCH8Q9UKJ3 1502 aaKnown RBP25.01■■□□□ 1.59
RDH13-202ENST00000396247 HFM1A2PYH4 1435 aa25■■□□□ 1.59
RDH13-202ENST00000396247 UHRF1BP1LA0JNW5 1464 aa24.99■■□□□ 1.59
RDH13-202ENST00000396247 CFDP1Q9UEE9 299 aaPredicted RBP24.98■■□□□ 1.59
RDH13-202ENST00000396247 ABCC10Q5T3U5 1492 aa24.98■■□□□ 1.59
RDH13-202ENST00000396247 ZNF644Q9H582 1327 aaPredicted RBP24.95■■□□□ 1.58
RDH13-202ENST00000396247 NAIPQ13075 1403 aa24.93■■□□□ 1.58
RDH13-202ENST00000396247 CAMSAP2Q08AD1 1489 aa24.92■■□□□ 1.58
RDH13-202ENST00000396247 DNMT1P26358 1616 aaKnown RBP24.92■■□□□ 1.58
RDH13-202ENST00000396247 DAPK1P53355 1430 aa24.91■■□□□ 1.58
RDH13-202ENST00000396247 KDM5BQ9UGL1 1544 aa24.91■■□□□ 1.58
RDH13-202ENST00000396247 CDC42BPAQ5VT25 1732 aa24.91■■□□□ 1.58
RDH13-202ENST00000396247 AKNAQ7Z591 1439 aa24.91■■□□□ 1.58
RDH13-202ENST00000396247 CHIC2Q9UKJ5 165 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms