RNA–Protein interactions for RNA: ENST00000396184.7

PDE1C-203, Transcript of phosphodiesterase 1C, humanhuman

TSL 1 (best) BASIC

Gene PDE1C, Length 8,852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-203ENST00000396184 TMC1Q8TDI8 760 aa9.03□□□□□ -0.96
PDE1C-203ENST00000396184 PNNQ9H307 717 aaKnown RBP9.03□□□□□ -0.96
PDE1C-203ENST00000396184 MRS2Q9HD23 443 aa9.02□□□□□ -0.96
PDE1C-203ENST00000396184 RBM19Q9Y4C8 960 aaKnown RBP9.02□□□□□ -0.96
PDE1C-203ENST00000396184 PRKCSHP14314 528 aaPredicted RBP9.02□□□□□ -0.97
PDE1C-203ENST00000396184 TONSLQ96HA7 1378 aa9.01□□□□□ -0.97
PDE1C-203ENST00000396184 DCAF1Q9Y4B6 1507 aa9□□□□□ -0.97
PDE1C-203ENST00000396184 TPRNQ4KMQ1 711 aa9□□□□□ -0.97
PDE1C-203ENST00000396184 PLCB2Q00722 1185 aa8.99□□□□□ -0.97
PDE1C-203ENST00000396184 A0A0U1RQG5 324 aaPredicted RBP8.99□□□□□ -0.97
PDE1C-203ENST00000396184 RSPH6AQ9H0K4 717 aa8.99□□□□□ -0.97
PDE1C-203ENST00000396184 ZRSR1Q15695 479 aaKnown RBP8.98□□□□□ -0.97
PDE1C-203ENST00000396184 PODXL2Q9NZ53 605 aa8.98□□□□□ -0.97
PDE1C-203ENST00000396184 PKNOX2Q96KN3 472 aa8.97□□□□□ -0.97
PDE1C-203ENST00000396184 PPP4R2Q9NY27 417 aa8.96□□□□□ -0.98
PDE1C-203ENST00000396184 MYH16Q9H6N6 1097 aa8.96□□□□□ -0.98
PDE1C-203ENST00000396184 WDR43Q15061 677 aaKnown RBP eCLIP8.94□□□□□ -0.98
PDE1C-203ENST00000396184 GOLGA6L6A8MZA4 724 aa8.93□□□□□ -0.98
PDE1C-203ENST00000396184 ZBTB7CA1YPR0 619 aa8.93□□□□□ -0.98
PDE1C-203ENST00000396184 TIMELESSQ9UNS1 1208 aa8.92□□□□□ -0.98
PDE1C-203ENST00000396184 B4GALNT3Q6L9W6 998 aa8.91□□□□□ -0.98
PDE1C-203ENST00000396184 NRDCO43847 1150 aa8.9□□□□□ -0.98
PDE1C-203ENST00000396184 CALRP27797 417 aaKnown RBP8.9□□□□□ -0.99
PDE1C-203ENST00000396184 TSHZ2Q9NRE2 1034 aa8.9□□□□□ -0.99
PDE1C-203ENST00000396184 HIRIP3Q9BW71 556 aaPredicted RBP8.89□□□□□ -0.99
PDE1C-203ENST00000396184 HSP90AB1P08238 724 aaKnown RBP8.89□□□□□ -0.99
PDE1C-203ENST00000396184 RGS3P49796 1198 aa8.89□□□□□ -0.99
PDE1C-203ENST00000396184 PTMSP20962 102 aa8.88□□□□□ -0.99
PDE1C-203ENST00000396184 CASC1Q6TDU7 716 aa8.87□□□□□ -0.99
PDE1C-203ENST00000396184 GZF1Q9H116 711 aaPredicted RBP8.87□□□□□ -0.99
PDE1C-203ENST00000396184 DRC7Q8IY82 874 aa8.86□□□□□ -0.99
PDE1C-203ENST00000396184 KIAA2012Q0VF49 1180 aa8.86□□□□□ -0.99
PDE1C-203ENST00000396184 SENP3-EIF4A1A0A087X0R7 540 aa8.85□□□□□ -0.99
PDE1C-203ENST00000396184 APPP05067 770 aa8.85□□□□□ -0.99
PDE1C-203ENST00000396184 SPRYD3Q8NCJ5 442 aa8.85□□□□□ -0.99
PDE1C-203ENST00000396184 HSCBQ8IWL3 235 aa8.84□□□□□ -0.99
PDE1C-203ENST00000396184 GOLGA6L3A6NEY3 463 aa8.84□□□□□ -1
PDE1C-203ENST00000396184 CCDC180Q9P1Z9 1646 aa8.83□□□□□ -1
PDE1C-203ENST00000396184 ANO8Q9HCE9 1232 aaPredicted RBP8.83□□□□□ -1
PDE1C-203ENST00000396184 ZNF771Q7L3S4 317 aaPredicted RBP8.81□□□□□ -1
PDE1C-203ENST00000396184 SETQ01105 290 aaPredicted RBP8.81□□□□□ -1
PDE1C-203ENST00000396184 IPO9Q96P70 1041 aaKnown RBP8.8□□□□□ -1
PDE1C-203ENST00000396184 FTSJ3Q8IY81 847 aaKnown RBP8.8□□□□□ -1
PDE1C-203ENST00000396184 GOLGA6L1Q8N7Z2 621 aa8.79□□□□□ -1
PDE1C-203ENST00000396184 GOLGA6L4A6NEF3 574 aa8.78□□□□□ -1
PDE1C-203ENST00000396184 GBP4Q96PP9 640 aa8.78□□□□□ -1
PDE1C-203ENST00000396184 SLKQ9H2G2 1235 aaPredicted RBP8.78□□□□□ -1
PDE1C-203ENST00000396184 EIF4G2P78344 907 aaKnown RBP eCLIP8.77□□□□□ -1
PDE1C-203ENST00000396184 USP35Q9P2H5 1018 aa8.77□□□□□ -1.01
PDE1C-203ENST00000396184 GSE1Q14687 1217 aa8.75□□□□□ -1.01
PDE1C-203ENST00000396184 P3H3Q8IVL6 736 aa8.75□□□□□ -1.01
PDE1C-203ENST00000396184 TULP1O00294 542 aaPredicted RBP8.75□□□□□ -1.01
PDE1C-203ENST00000396184 FAM13BQ9NYF5 915 aa8.75□□□□□ -1.01
PDE1C-203ENST00000396184 NOC3LQ8WTT2 800 aaKnown RBP8.74□□□□□ -1.01
PDE1C-203ENST00000396184 ZNF777Q9ULD5 760 aaPredicted RBP8.74□□□□□ -1.01
PDE1C-203ENST00000396184 ARID3CA6NKF2 412 aa8.73□□□□□ -1.01
PDE1C-203ENST00000396184 TAOK2Q9UL54 1235 aa8.73□□□□□ -1.01
PDE1C-203ENST00000396184 FRAT1Q92837 279 aaPredicted RBP8.72□□□□□ -1.01
PDE1C-203ENST00000396184 KDM2AQ9Y2K7 1162 aa8.71□□□□□ -1.01
PDE1C-203ENST00000396184 SYAP1Q96A49 352 aaPredicted RBP8.71□□□□□ -1.02
PDE1C-203ENST00000396184 FGD1P98174 961 aa8.7□□□□□ -1.02
PDE1C-203ENST00000396184 TCERG1O14776 1098 aaKnown RBP8.69□□□□□ -1.02
PDE1C-203ENST00000396184 CHGAP10645 457 aaKnown RBP8.68□□□□□ -1.02
PDE1C-203ENST00000396184 NAP1L2Q9ULW6 460 aaPredicted RBP8.68□□□□□ -1.02
PDE1C-203ENST00000396184 KCNJ4P48050 445 aa8.67□□□□□ -1.02
PDE1C-203ENST00000396184 CHIC2Q9UKJ5 165 aa8.67□□□□□ -1.02
PDE1C-203ENST00000396184 CALD1Q05682 793 aaKnown RBP8.66□□□□□ -1.02
PDE1C-203ENST00000396184 MCCP23508 829 aa8.66□□□□□ -1.02
PDE1C-203ENST00000396184 NEUROD2Q15784 382 aa8.65□□□□□ -1.02
PDE1C-203ENST00000396184 HTATSF1O43719 755 aaKnown RBP8.65□□□□□ -1.02
PDE1C-203ENST00000396184 TEX35Q5T0J7 233 aa8.65□□□□□ -1.02
PDE1C-203ENST00000396184 NOM1Q5C9Z4 860 aaKnown RBP8.65□□□□□ -1.02
PDE1C-203ENST00000396184 PATL2C9JE40 543 aaKnown RBP8.65□□□□□ -1.03
PDE1C-203ENST00000396184 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.64□□□□□ -1.03
PDE1C-203ENST00000396184 FAM43AQ8N2R8 423 aa8.64□□□□□ -1.03
PDE1C-203ENST00000396184 FANCIQ9NVI1 1328 aa8.64□□□□□ -1.03
PDE1C-203ENST00000396184 CHMP4BQ9H444 224 aaKnown RBP8.64□□□□□ -1.03
PDE1C-203ENST00000396184 DDX11L8A8MPP1 907 aa8.63□□□□□ -1.03
PDE1C-203ENST00000396184 MS4A1P11836 297 aa8.63□□□□□ -1.03
PDE1C-203ENST00000396184 MAP7D2Q96T17 732 aa8.63□□□□□ -1.03
PDE1C-203ENST00000396184 KNSTRNQ9Y448 316 aa8.63□□□□□ -1.03
PDE1C-203ENST00000396184 GPS2Q13227 327 aa8.62□□□□□ -1.03
PDE1C-203ENST00000396184 PHF14O94880 888 aa8.62□□□□□ -1.03
PDE1C-203ENST00000396184 MTERF4Q7Z6M4 381 aaKnown RBP8.62□□□□□ -1.03
PDE1C-203ENST00000396184 CCER2I3L3R5 266 aa8.62□□□□□ -1.03
PDE1C-203ENST00000396184 CFAP53Q96M91 514 aa8.62□□□□□ -1.03
PDE1C-203ENST00000396184 IL27Q8NEV9 243 aa8.61□□□□□ -1.03
PDE1C-203ENST00000396184 TPM4P67936 248 aa8.61□□□□□ -1.03
PDE1C-203ENST00000396184 CCDC66A2RUB6 948 aa8.61□□□□□ -1.03
PDE1C-203ENST00000396184 CSPP1Q1MSJ5 1256 aa8.61□□□□□ -1.03
PDE1C-203ENST00000396184 CFAP44Q96MT7 982 aa8.61□□□□□ -1.03
PDE1C-203ENST00000396184 TAF7LQ5H9L4 462 aa8.6□□□□□ -1.03
PDE1C-203ENST00000396184 PDE4CQ08493 712 aa8.6□□□□□ -1.03
PDE1C-203ENST00000396184 MYO15BQ96JP2 1530 aa8.6□□□□□ -1.03
PDE1C-203ENST00000396184 STAG3Q9UJ98 1225 aa8.6□□□□□ -1.03
PDE1C-203ENST00000396184 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.59□□□□□ -1.03
PDE1C-203ENST00000396184 OS9Q13438 667 aaPredicted RBP8.59□□□□□ -1.03
PDE1C-203ENST00000396184 MFAP1P55081 439 aaKnown RBP8.59□□□□□ -1.03
PDE1C-203ENST00000396184 CCAR2Q8N163 923 aaKnown RBP8.59□□□□□ -1.03
PDE1C-203ENST00000396184 FOXD4L1Q9NU39 408 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms