RNA–Protein interactions for RNA: ENST00000395260.3

RTKN2-203, Transcript of rhotekin 2, humanhuman

TSL 1 (best) BASIC

Gene RTKN2, Length 2,076 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTKN2-203ENST00000395260 GRIN2BQ13224 1484 aa26.89■■□□□ 1.89
RTKN2-203ENST00000395260 EFCAB5A4FU69 1503 aa26.88■■□□□ 1.89
RTKN2-203ENST00000395260 ZNF608Q9ULD9 1512 aaPredicted RBP26.87■■□□□ 1.89
RTKN2-203ENST00000395260 FHAD1B1AJZ9 1412 aa26.86■■□□□ 1.89
RTKN2-203ENST00000395260 ADAMTS12P58397 1594 aa26.85■■□□□ 1.89
RTKN2-203ENST00000395260 P3H3Q8IVL6 736 aa26.8■■□□□ 1.88
RTKN2-203ENST00000395260 EIF4G3O43432 1585 aaKnown RBP26.78■■□□□ 1.88
RTKN2-203ENST00000395260 FHOD3Q2V2M9 1422 aa26.77■■□□□ 1.88
RTKN2-203ENST00000395260 ZEB1P37275 1124 aaPredicted RBP26.77■■□□□ 1.88
RTKN2-203ENST00000395260 KANK4Q5T7N3 995 aaPredicted RBP26.77■■□□□ 1.88
RTKN2-203ENST00000395260 MAP3K1Q13233 1512 aa26.73■■□□□ 1.87
RTKN2-203ENST00000395260 PCF11O94913 1555 aaKnown RBP26.72■■□□□ 1.87
RTKN2-203ENST00000395260 SAMD9Q5K651 1589 aa26.72■■□□□ 1.87
RTKN2-203ENST00000395260 TIAM1Q13009 1591 aa26.71■■□□□ 1.87
RTKN2-203ENST00000395260 SNAPC4Q5SXM2 1469 aa26.69■■□□□ 1.86
RTKN2-203ENST00000395260 FMN1Q68DA7 1419 aa26.66■■□□□ 1.86
RTKN2-203ENST00000395260 FYCO1Q9BQS8 1478 aa26.66■■□□□ 1.86
RTKN2-203ENST00000395260 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.64■■□□□ 1.86
RTKN2-203ENST00000395260 IQGAP2Q13576 1575 aa26.64■■□□□ 1.86
RTKN2-203ENST00000395260 CASKIN1Q8WXD9 1431 aa26.63■■□□□ 1.85
RTKN2-203ENST00000395260 CFAP43Q8NDM7 1665 aa26.62■■□□□ 1.85
RTKN2-203ENST00000395260 MAGI1Q96QZ7 1491 aaPredicted RBP26.6■■□□□ 1.85
RTKN2-203ENST00000395260 HNRNPUL2Q1KMD3 747 aaKnown RBP26.59■■□□□ 1.85
RTKN2-203ENST00000395260 CCER1Q8TC90 406 aaPredicted RBP26.59■■□□□ 1.85
RTKN2-203ENST00000395260 ATP1B4Q9UN42 357 aaPredicted RBP26.59■■□□□ 1.85
RTKN2-203ENST00000395260 LRRC9Q6ZRR7 1453 aa26.58■■□□□ 1.85
RTKN2-203ENST00000395260 GRIN2AQ12879 1464 aa26.57■■□□□ 1.84
RTKN2-203ENST00000395260 RRBP1Q9P2E9 1410 aaKnown RBP26.54■■□□□ 1.84
RTKN2-203ENST00000395260 SYNJ2O15056 1496 aa26.51■■□□□ 1.83
RTKN2-203ENST00000395260 KIAA0586Q9BVV6 1533 aa26.51■■□□□ 1.83
RTKN2-203ENST00000395260 UGGT2Q9NYU1 1516 aa26.49■■□□□ 1.83
RTKN2-203ENST00000395260 CHMP7Q8WUX9 453 aaPredicted RBP26.48■■□□□ 1.83
RTKN2-203ENST00000395260 CCNB3Q8WWL7 1395 aa26.45■■□□□ 1.83
RTKN2-203ENST00000395260 FBLN2P98095 1184 aa26.4■■□□□ 1.82
RTKN2-203ENST00000395260 LRRIQ1Q96JM4 1722 aa26.4■■□□□ 1.82
RTKN2-203ENST00000395260 CEP170Q5SW79 1584 aa26.39■■□□□ 1.82
RTKN2-203ENST00000395260 PHLDB1Q86UU1 1377 aa26.37■■□□□ 1.81
RTKN2-203ENST00000395260 KIAA0556O60303 1618 aa26.37■■□□□ 1.81
RTKN2-203ENST00000395260 DISP1Q96F81 1524 aa26.35■■□□□ 1.81
RTKN2-203ENST00000395260 HECW1Q76N89 1606 aa26.34■■□□□ 1.81
RTKN2-203ENST00000395260 NUP160Q12769 1436 aa26.33■■□□□ 1.81
RTKN2-203ENST00000395260 MTUS2Q5JR59 1369 aa26.33■■□□□ 1.81
RTKN2-203ENST00000395260 CCDC18Q5T9S5 1454 aa26.32■■□□□ 1.8
RTKN2-203ENST00000395260 EHBP1L1Q8N3D4 1523 aa26.25■■□□□ 1.79
RTKN2-203ENST00000395260 ITGAEP38570 1179 aa26.23■■□□□ 1.79
RTKN2-203ENST00000395260 EPRSP07814 1512 aaKnown RBP26.23■■□□□ 1.79
RTKN2-203ENST00000395260 SUPT6HQ7KZ85 1726 aaKnown RBP26.21■■□□□ 1.79
RTKN2-203ENST00000395260 FAM50AQ14320 339 aaKnown RBP26.2■■□□□ 1.78
RTKN2-203ENST00000395260 JPH4Q96JJ6 628 aa26.19■■□□□ 1.78
RTKN2-203ENST00000395260 CARMIL2Q6F5E8 1435 aa26.18■■□□□ 1.78
RTKN2-203ENST00000395260 NCOA2Q15596 1464 aa26.18■■□□□ 1.78
RTKN2-203ENST00000395260 MAGI3Q5TCQ9 1506 aa26.17■■□□□ 1.78
RTKN2-203ENST00000395260 CDK13Q14004 1512 aaKnown RBP26.17■■□□□ 1.78
RTKN2-203ENST00000395260 RAPGEF6Q8TEU7 1601 aa26.16■■□□□ 1.78
RTKN2-203ENST00000395260 FGD6Q6ZV73 1430 aa26.15■■□□□ 1.78
RTKN2-203ENST00000395260 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.15■■□□□ 1.78
RTKN2-203ENST00000395260 CHD1O14646 1710 aa26.13■■□□□ 1.77
RTKN2-203ENST00000395260 MYOM3Q5VTT5 1437 aa26.11■■□□□ 1.77
RTKN2-203ENST00000395260 NUP153P49790 1475 aaKnown RBP26.11■■□□□ 1.77
RTKN2-203ENST00000395260 ARHGEF11O15085 1522 aa26.1■■□□□ 1.77
RTKN2-203ENST00000395260 ARID3CA6NKF2 412 aa26.1■■□□□ 1.77
RTKN2-203ENST00000395260 DHX57Q6P158 1386 aaKnown RBP26.07■■□□□ 1.76
RTKN2-203ENST00000395260 PLB1Q6P1J6 1458 aa26.04■■□□□ 1.76
RTKN2-203ENST00000395260 RAB3GAP2Q9H2M9 1393 aa26.02■■□□□ 1.76
RTKN2-203ENST00000395260 SETD5Q9C0A6 1442 aa26.02■■□□□ 1.76
RTKN2-203ENST00000395260 CLSPNQ9HAW4 1339 aa26.02■■□□□ 1.76
RTKN2-203ENST00000395260 PRG4Q92954 1404 aaPredicted RBP25.99■■□□□ 1.75
RTKN2-203ENST00000395260 PTPN23Q9H3S7 1636 aa25.99■■□□□ 1.75
RTKN2-203ENST00000395260 CDK11AQ9UQ88 783 aaPredicted RBP25.98■■□□□ 1.75
RTKN2-203ENST00000395260 ABCA8O94911 1581 aa25.94■■□□□ 1.74
RTKN2-203ENST00000395260 TCOF1Q13428 1488 aaKnown RBP25.92■■□□□ 1.74
RTKN2-203ENST00000395260 SHROOM2Q13796 1616 aa25.91■■□□□ 1.74
RTKN2-203ENST00000395260 MIA2Q96PC5 1412 aa25.91■■□□□ 1.74
RTKN2-203ENST00000395260 TROQ12816 1431 aaPredicted RBP25.88■■□□□ 1.73
RTKN2-203ENST00000395260 PTPRGP23470 1445 aa25.87■■□□□ 1.73
RTKN2-203ENST00000395260 PTPRKQ15262 1439 aa25.87■■□□□ 1.73
RTKN2-203ENST00000395260 HFM1A2PYH4 1435 aa25.82■■□□□ 1.72
RTKN2-203ENST00000395260 ADCY10Q96PN6 1610 aa25.81■■□□□ 1.72
RTKN2-203ENST00000395260 ATP10BO94823 1461 aa25.8■■□□□ 1.72
RTKN2-203ENST00000395260 CLASP1Q7Z460 1538 aa25.79■■□□□ 1.72
RTKN2-203ENST00000395260 MAPKBP1O60336 1514 aa25.77■■□□□ 1.72
RTKN2-203ENST00000395260 KIF14Q15058 1648 aa25.76■■□□□ 1.71
RTKN2-203ENST00000395260 PLEKHD1A6NEE1 506 aa25.75■■□□□ 1.71
RTKN2-203ENST00000395260 ITSN2Q9NZM3 1697 aa25.75■■□□□ 1.71
RTKN2-203ENST00000395260 ERCC6L2Q5T890 1561 aa25.75■■□□□ 1.71
RTKN2-203ENST00000395260 NAIPQ13075 1403 aa25.75■■□□□ 1.71
RTKN2-203ENST00000395260 UACAQ9BZF9 1416 aa25.73■■□□□ 1.71
RTKN2-203ENST00000395260 GPATCH8Q9UKJ3 1502 aaKnown RBP25.69■■□□□ 1.7
RTKN2-203ENST00000395260 AKNAQ7Z591 1439 aa25.69■■□□□ 1.7
RTKN2-203ENST00000395260 CHIC2Q9UKJ5 165 aa25.68■■□□□ 1.7
RTKN2-203ENST00000395260 GCC2Q8IWJ2 1684 aa25.68■■□□□ 1.7
RTKN2-203ENST00000395260 DNMT1P26358 1616 aaKnown RBP25.67■■□□□ 1.7
RTKN2-203ENST00000395260 DAPK1P53355 1430 aa25.67■■□□□ 1.7
RTKN2-203ENST00000395260 CFDP1Q9UEE9 299 aaPredicted RBP25.67■■□□□ 1.7
RTKN2-203ENST00000395260 ZNF644Q9H582 1327 aaPredicted RBP25.66■■□□□ 1.7
RTKN2-203ENST00000395260 ZNF316A6NFI3 1004 aaPredicted RBP25.65■■□□□ 1.7
RTKN2-203ENST00000395260 RRP7BPQ9NSQ0 103 aa25.65■■□□□ 1.7
RTKN2-203ENST00000395260 CAMSAP2Q08AD1 1489 aa25.64■■□□□ 1.69
RTKN2-203ENST00000395260 ABCC2Q92887 1545 aa25.63■■□□□ 1.69
RTKN2-203ENST00000395260 ABCC10Q5T3U5 1492 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms