RNA–Protein interactions for RNA: ENST00000395211.6

TMOD1-203, Transcript of tropomodulin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMOD1, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD1-203ENST00000395211 DHX57Q6P158 1386 aaKnown RBP13.1□□□□□ -0.31
TMOD1-203ENST00000395211 RSF1Q96T23 1441 aaPredicted RBP13.08□□□□□ -0.32
TMOD1-203ENST00000395211 A0A0U1RQG5 324 aaPredicted RBP13.07□□□□□ -0.32
TMOD1-203ENST00000395211 EIF4G1Q04637 1599 aaKnown RBP13.07□□□□□ -0.32
TMOD1-203ENST00000395211 PABPN1Q86U42 306 aaKnown RBP eCLIP13.07□□□□□ -0.32
TMOD1-203ENST00000395211 RSPH6AQ9H0K4 717 aa13.05□□□□□ -0.32
TMOD1-203ENST00000395211 SIN3AQ96ST3 1273 aa13.04□□□□□ -0.32
TMOD1-203ENST00000395211 CCER2I3L3R5 266 aa13.03□□□□□ -0.32
TMOD1-203ENST00000395211 WASHC2AQ641Q2 1341 aa13.02□□□□□ -0.32
TMOD1-203ENST00000395211 C11orf95C9JLR9 678 aaPredicted RBP13□□□□□ -0.33
TMOD1-203ENST00000395211 DAXXQ9UER7 740 aaPredicted RBP13□□□□□ -0.33
TMOD1-203ENST00000395211 TNIKQ9UKE5 1360 aa13□□□□□ -0.33
TMOD1-203ENST00000395211 GSE1Q14687 1217 aa12.98□□□□□ -0.33
TMOD1-203ENST00000395211 PPP1R15AO75807 674 aaPredicted RBP12.97□□□□□ -0.33
TMOD1-203ENST00000395211 BAZ1BQ9UIG0 1483 aaKnown RBP12.97□□□□□ -0.33
TMOD1-203ENST00000395211 WASHC2CQ9Y4E1 1318 aa12.96□□□□□ -0.33
TMOD1-203ENST00000395211 CC2D2AQ9P2K1 1620 aa12.96□□□□□ -0.33
TMOD1-203ENST00000395211 PEG3Q9GZU2 1588 aa12.95□□□□□ -0.34
TMOD1-203ENST00000395211 USP35Q9P2H5 1018 aa12.94□□□□□ -0.34
TMOD1-203ENST00000395211 FRAT1Q92837 279 aaPredicted RBP12.94□□□□□ -0.34
TMOD1-203ENST00000395211 SMARCA4P51532 1647 aa12.93□□□□□ -0.34
TMOD1-203ENST00000395211 PPM1GO15355 546 aaPredicted RBP12.93□□□□□ -0.34
TMOD1-203ENST00000395211 BAZ1AQ9NRL2 1556 aaPredicted RBP12.92□□□□□ -0.34
TMOD1-203ENST00000395211 FAM9BQ8IZU0 186 aa12.92□□□□□ -0.34
TMOD1-203ENST00000395211 NAP1L5Q96NT1 182 aaPredicted RBP12.91□□□□□ -0.34
TMOD1-203ENST00000395211 HSP90AA2PQ14568 343 aaPredicted RBP12.91□□□□□ -0.34
TMOD1-203ENST00000395211 SOGA1O94964 1423 aa12.9□□□□□ -0.34
TMOD1-203ENST00000395211 SENP3-EIF4A1A0A087X0R7 540 aa12.89□□□□□ -0.35
TMOD1-203ENST00000395211 ARID4BQ4LE39 1312 aaPredicted RBP12.88□□□□□ -0.35
TMOD1-203ENST00000395211 ABCC8Q09428 1581 aa12.87□□□□□ -0.35
TMOD1-203ENST00000395211 ARXQ96QS3 562 aa12.87□□□□□ -0.35
TMOD1-203ENST00000395211 FAM43AQ8N2R8 423 aa12.86□□□□□ -0.35
TMOD1-203ENST00000395211 CNGB1Q14028 1251 aaPredicted RBP12.86□□□□□ -0.35
TMOD1-203ENST00000395211 SLC4A3P48751 1232 aa12.85□□□□□ -0.35
TMOD1-203ENST00000395211 HMGXB3Q12766 1538 aa12.85□□□□□ -0.35
TMOD1-203ENST00000395211 DNAJC5BQ9UF47 199 aa12.84□□□□□ -0.35
TMOD1-203ENST00000395211 CCDC88BA6NC98 1476 aa12.84□□□□□ -0.35
TMOD1-203ENST00000395211 NFKBIBQ15653 356 aa12.84□□□□□ -0.35
TMOD1-203ENST00000395211 SMARCA2P51531 1590 aa12.83□□□□□ -0.36
TMOD1-203ENST00000395211 RBM10P98175 930 aaKnown RBP12.83□□□□□ -0.36
TMOD1-203ENST00000395211 NCAPD3P42695 1498 aa12.83□□□□□ -0.36
TMOD1-203ENST00000395211 CECR2Q9BXF3 1484 aa12.83□□□□□ -0.36
TMOD1-203ENST00000395211 HSP90AA1P07900 732 aaKnown RBP12.82□□□□□ -0.36
TMOD1-203ENST00000395211 DCAF11Q8TEB1 546 aa12.81□□□□□ -0.36
TMOD1-203ENST00000395211 CLIP1P30622 1438 aa12.81□□□□□ -0.36
TMOD1-203ENST00000395211 EEA1Q15075 1411 aa12.79□□□□□ -0.36
TMOD1-203ENST00000395211 RUSC2Q8N2Y8 1516 aa12.79□□□□□ -0.36
TMOD1-203ENST00000395211 WDR97A6NE52 1622 aa12.78□□□□□ -0.36
TMOD1-203ENST00000395211 CCDC184Q52MB2 194 aa12.78□□□□□ -0.36
TMOD1-203ENST00000395211 ATAD2BQ9ULI0 1458 aa12.78□□□□□ -0.36
TMOD1-203ENST00000395211 RRAGDQ9NQL2 400 aaPredicted RBP12.77□□□□□ -0.37
TMOD1-203ENST00000395211 PDE4AP27815 886 aa12.76□□□□□ -0.37
TMOD1-203ENST00000395211 GOLGA3Q08378 1498 aa12.76□□□□□ -0.37
TMOD1-203ENST00000395211 MROH2BQ7Z745 1585 aa12.76□□□□□ -0.37
TMOD1-203ENST00000395211 PDE4CQ08493 712 aa12.75□□□□□ -0.37
TMOD1-203ENST00000395211 MRS2Q9HD23 443 aa12.75□□□□□ -0.37
TMOD1-203ENST00000395211 PNNQ9H307 717 aaKnown RBP12.75□□□□□ -0.37
TMOD1-203ENST00000395211 KANK4Q5T7N3 995 aaPredicted RBP12.74□□□□□ -0.37
TMOD1-203ENST00000395211 VPS8Q8N3P4 1428 aa12.74□□□□□ -0.37
TMOD1-203ENST00000395211 RRP9O43818 475 aaKnown RBP12.73□□□□□ -0.37
TMOD1-203ENST00000395211 FRAT2O75474 233 aaPredicted RBP12.73□□□□□ -0.37
TMOD1-203ENST00000395211 AKNAQ7Z591 1439 aa12.72□□□□□ -0.37
TMOD1-203ENST00000395211 AAMPQ13685 434 aa12.72□□□□□ -0.37
TMOD1-203ENST00000395211 RAB3GAP2Q9H2M9 1393 aa12.7□□□□□ -0.38
TMOD1-203ENST00000395211 FGD1P98174 961 aa12.7□□□□□ -0.38
TMOD1-203ENST00000395211 DDRGK1Q96HY6 314 aa12.69□□□□□ -0.38
TMOD1-203ENST00000395211 SKAP1Q86WV1 359 aa12.67□□□□□ -0.38
TMOD1-203ENST00000395211 TCERG1O14776 1098 aaKnown RBP12.66□□□□□ -0.38
TMOD1-203ENST00000395211 RGS3P49796 1198 aa12.66□□□□□ -0.38
TMOD1-203ENST00000395211 BACH2Q9BYV9 841 aa12.66□□□□□ -0.38
TMOD1-203ENST00000395211 ZBED9Q6R2W3 1325 aa12.65□□□□□ -0.38
TMOD1-203ENST00000395211 BCL11BQ9C0K0 894 aaPredicted RBP12.64□□□□□ -0.39
TMOD1-203ENST00000395211 WIZO95785 1651 aa12.62□□□□□ -0.39
TMOD1-203ENST00000395211 FAM50AQ14320 339 aaKnown RBP12.62□□□□□ -0.39
TMOD1-203ENST00000395211 POGKQ9P215 609 aa12.62□□□□□ -0.39
TMOD1-203ENST00000395211 TONSLQ96HA7 1378 aa12.61□□□□□ -0.39
TMOD1-203ENST00000395211 EXOC6Q8TAG9 804 aa12.61□□□□□ -0.39
TMOD1-203ENST00000395211 ARID3AQ99856 593 aa12.61□□□□□ -0.39
TMOD1-203ENST00000395211 MAPKBP1O60336 1514 aa12.6□□□□□ -0.39
TMOD1-203ENST00000395211 TOP2AP11388 1531 aaKnown RBP12.6□□□□□ -0.39
TMOD1-203ENST00000395211 CCNB3Q8WWL7 1395 aa12.6□□□□□ -0.39
TMOD1-203ENST00000395211 NUDCQ9Y266 331 aa12.59□□□□□ -0.39
TMOD1-203ENST00000395211 PDIA4P13667 645 aaKnown RBP12.57□□□□□ -0.4
TMOD1-203ENST00000395211 POLR3GLQ9BT43 218 aa12.57□□□□□ -0.4
TMOD1-203ENST00000395211 CEP164Q9UPV0 1460 aa12.56□□□□□ -0.4
TMOD1-203ENST00000395211 L1TD1Q5T7N2 865 aaKnown RBP12.55□□□□□ -0.4
TMOD1-203ENST00000395211 GZF1Q9H116 711 aaPredicted RBP12.55□□□□□ -0.4
TMOD1-203ENST00000395211 PRKRIP1Q9H875 184 aaPredicted RBP12.54□□□□□ -0.4
TMOD1-203ENST00000395211 HSPA5P11021 654 aaKnown RBP12.53□□□□□ -0.4
TMOD1-203ENST00000395211 SETD5Q9C0A6 1442 aa12.52□□□□□ -0.41
TMOD1-203ENST00000395211 PANK2Q9BZ23 570 aa12.52□□□□□ -0.41
TMOD1-203ENST00000395211 MS4A1P11836 297 aa12.51□□□□□ -0.41
TMOD1-203ENST00000395211 CLCN1P35523 988 aa12.51□□□□□ -0.41
TMOD1-203ENST00000395211 SLKQ9H2G2 1235 aaPredicted RBP12.51□□□□□ -0.41
TMOD1-203ENST00000395211 LAMC3Q9Y6N6 1575 aa12.5□□□□□ -0.41
TMOD1-203ENST00000395211 PHF23Q9BUL5 403 aaPredicted RBP12.5□□□□□ -0.41
TMOD1-203ENST00000395211 BBXQ8WY36 941 aaPredicted RBP12.49□□□□□ -0.41
TMOD1-203ENST00000395211 ZHX1Q9UKY1 873 aaPredicted RBP12.49□□□□□ -0.41
TMOD1-203ENST00000395211 KIF21BO75037 1637 aa12.49□□□□□ -0.41
TMOD1-203ENST00000395211 SMG6Q86US8 1419 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms