RNA–Protein interactions for RNA: ENST00000394487.4

TLR4-202, Transcript of toll like receptor 4, humanhuman

TSL 1 (best) BASIC

Gene TLR4, Length 3,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4-202ENST00000394487 TMC1Q8TDI8 760 aa9.35□□□□□ -0.91
TLR4-202ENST00000394487 SCRIBQ14160 1630 aa9.35□□□□□ -0.91
TLR4-202ENST00000394487 SLC4A1APQ9BWU0 796 aaKnown RBP9.35□□□□□ -0.91
TLR4-202ENST00000394487 MSH5O43196 834 aa9.34□□□□□ -0.91
TLR4-202ENST00000394487 SOGA1O94964 1423 aa9.34□□□□□ -0.91
TLR4-202ENST00000394487 TNIKQ9UKE5 1360 aa9.33□□□□□ -0.92
TLR4-202ENST00000394487 IL27Q8NEV9 243 aa9.33□□□□□ -0.92
TLR4-202ENST00000394487 BICRAQ9NZM4 1560 aa9.32□□□□□ -0.92
TLR4-202ENST00000394487 KANK4Q5T7N3 995 aaPredicted RBP9.31□□□□□ -0.92
TLR4-202ENST00000394487 BAZ1BQ9UIG0 1483 aaKnown RBP9.31□□□□□ -0.92
TLR4-202ENST00000394487 CANXP27824 592 aaKnown RBP9.3□□□□□ -0.92
TLR4-202ENST00000394487 NAP1L5Q96NT1 182 aaPredicted RBP9.29□□□□□ -0.92
TLR4-202ENST00000394487 TIMELESSQ9UNS1 1208 aa9.29□□□□□ -0.92
TLR4-202ENST00000394487 PAK3O75914 559 aaPredicted RBP9.28□□□□□ -0.92
TLR4-202ENST00000394487 EIF4G2P78344 907 aaKnown RBP eCLIP9.28□□□□□ -0.92
TLR4-202ENST00000394487 FANCIQ9NVI1 1328 aa9.27□□□□□ -0.93
TLR4-202ENST00000394487 PPM1GO15355 546 aaPredicted RBP9.27□□□□□ -0.93
TLR4-202ENST00000394487 IPO9Q96P70 1041 aaKnown RBP9.26□□□□□ -0.93
TLR4-202ENST00000394487 RRP7BPQ9NSQ0 103 aa9.26□□□□□ -0.93
TLR4-202ENST00000394487 CCER2I3L3R5 266 aa9.26□□□□□ -0.93
TLR4-202ENST00000394487 RGS3P49796 1198 aa9.26□□□□□ -0.93
TLR4-202ENST00000394487 SLC4A3P48751 1232 aa9.25□□□□□ -0.93
TLR4-202ENST00000394487 GOLGA3Q08378 1498 aa9.25□□□□□ -0.93
TLR4-202ENST00000394487 ERICH6BQ5W0A0 696 aa9.24□□□□□ -0.93
TLR4-202ENST00000394487 DHX57Q6P158 1386 aaKnown RBP9.23□□□□□ -0.93
TLR4-202ENST00000394487 KDM2AQ9Y2K7 1162 aa9.23□□□□□ -0.93
TLR4-202ENST00000394487 CCDC88BA6NC98 1476 aa9.22□□□□□ -0.93
TLR4-202ENST00000394487 DDRGK1Q96HY6 314 aa9.21□□□□□ -0.94
TLR4-202ENST00000394487 HSP90AA1P07900 732 aaKnown RBP9.2□□□□□ -0.94
TLR4-202ENST00000394487 SPRYD3Q8NCJ5 442 aa9.2□□□□□ -0.94
TLR4-202ENST00000394487 ARID3AQ99856 593 aa9.2□□□□□ -0.94
TLR4-202ENST00000394487 BRPF3Q9ULD4 1205 aa9.2□□□□□ -0.94
TLR4-202ENST00000394487 ZNF777Q9ULD5 760 aaPredicted RBP9.2□□□□□ -0.94
TLR4-202ENST00000394487 CECR2Q9BXF3 1484 aa9.19□□□□□ -0.94
TLR4-202ENST00000394487 CCNB3Q8WWL7 1395 aa9.19□□□□□ -0.94
TLR4-202ENST00000394487 ABCC8Q09428 1581 aa9.19□□□□□ -0.94
TLR4-202ENST00000394487 HSPA5P11021 654 aaKnown RBP9.18□□□□□ -0.94
TLR4-202ENST00000394487 VSIG10Q8N0Z9 540 aa9.18□□□□□ -0.94
TLR4-202ENST00000394487 RAB3GAP2Q9H2M9 1393 aa9.18□□□□□ -0.94
TLR4-202ENST00000394487 GZF1Q9H116 711 aaPredicted RBP9.18□□□□□ -0.94
TLR4-202ENST00000394487 UPF2Q9HAU5 1272 aaKnown RBP9.18□□□□□ -0.94
TLR4-202ENST00000394487 PPP1R15AO75807 674 aaPredicted RBP9.16□□□□□ -0.94
TLR4-202ENST00000394487 SLKQ9H2G2 1235 aaPredicted RBP9.16□□□□□ -0.94
TLR4-202ENST00000394487 FOXD1Q16676 465 aa9.16□□□□□ -0.94
TLR4-202ENST00000394487 ANP32BQ92688 251 aaKnown RBP9.15□□□□□ -0.94
TLR4-202ENST00000394487 TRIM44Q96DX7 344 aaPredicted RBP9.15□□□□□ -0.94
TLR4-202ENST00000394487 RUSC2Q8N2Y8 1516 aa9.14□□□□□ -0.95
TLR4-202ENST00000394487 VPS8Q8N3P4 1428 aa9.14□□□□□ -0.95
TLR4-202ENST00000394487 WRNQ14191 1432 aaPredicted RBP eCLIP9.12□□□□□ -0.95
TLR4-202ENST00000394487 GSE1Q14687 1217 aa9.12□□□□□ -0.95
TLR4-202ENST00000394487 EEA1Q15075 1411 aa9.12□□□□□ -0.95
TLR4-202ENST00000394487 CEP164Q9UPV0 1460 aa9.11□□□□□ -0.95
TLR4-202ENST00000394487 ZBTB7CA1YPR0 619 aa9.11□□□□□ -0.95
TLR4-202ENST00000394487 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.11□□□□□ -0.95
TLR4-202ENST00000394487 PDE4AP27815 886 aa9.11□□□□□ -0.95
TLR4-202ENST00000394487 PNNQ9H307 717 aaKnown RBP9.11□□□□□ -0.95
TLR4-202ENST00000394487 PLIN1O60240 522 aa9.1□□□□□ -0.95
TLR4-202ENST00000394487 AMER1Q5JTC6 1135 aaPredicted RBP9.1□□□□□ -0.95
TLR4-202ENST00000394487 BECN1Q14457 450 aa9.1□□□□□ -0.95
TLR4-202ENST00000394487 MTUS2Q5JR59 1369 aa9.1□□□□□ -0.95
TLR4-202ENST00000394487 EXOC6Q8TAG9 804 aa9.1□□□□□ -0.95
TLR4-202ENST00000394487 WDR43Q15061 677 aaKnown RBP eCLIP9.09□□□□□ -0.95
TLR4-202ENST00000394487 SETD5Q9C0A6 1442 aa9.08□□□□□ -0.96
TLR4-202ENST00000394487 TPRNQ4KMQ1 711 aa9.08□□□□□ -0.96
TLR4-202ENST00000394487 NCLP19338 710 aaKnown RBP9.08□□□□□ -0.96
TLR4-202ENST00000394487 TCERG1O14776 1098 aaKnown RBP9.08□□□□□ -0.96
TLR4-202ENST00000394487 CCDC184Q52MB2 194 aa9.08□□□□□ -0.96
TLR4-202ENST00000394487 NUDCQ9Y266 331 aa9.08□□□□□ -0.96
TLR4-202ENST00000394487 CC2D1BQ5T0F9 858 aaKnown RBP9.07□□□□□ -0.96
TLR4-202ENST00000394487 RCAN3Q9UKA8 241 aa9.07□□□□□ -0.96
TLR4-202ENST00000394487 PEG3Q9GZU2 1588 aa9.07□□□□□ -0.96
TLR4-202ENST00000394487 NEUROD2Q15784 382 aa9.07□□□□□ -0.96
TLR4-202ENST00000394487 RGL3Q3MIN7 710 aa9.06□□□□□ -0.96
TLR4-202ENST00000394487 HSP90AA2PQ14568 343 aaPredicted RBP9.06□□□□□ -0.96
TLR4-202ENST00000394487 FRAT1Q92837 279 aaPredicted RBP9.06□□□□□ -0.96
TLR4-202ENST00000394487 PKNOX2Q96KN3 472 aa9.05□□□□□ -0.96
TLR4-202ENST00000394487 PRKRIP1Q9H875 184 aaPredicted RBP9.05□□□□□ -0.96
TLR4-202ENST00000394487 NFKBIBQ15653 356 aa9.04□□□□□ -0.96
TLR4-202ENST00000394487 MROH2BQ7Z745 1585 aa9.04□□□□□ -0.96
TLR4-202ENST00000394487 CARD11Q9BXL7 1154 aa9.04□□□□□ -0.96
TLR4-202ENST00000394487 SKAP1Q86WV1 359 aa9.04□□□□□ -0.96
TLR4-202ENST00000394487 USP35Q9P2H5 1018 aa9.04□□□□□ -0.96
TLR4-202ENST00000394487 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.03□□□□□ -0.96
TLR4-202ENST00000394487 RSPH6AQ9H0K4 717 aa9.03□□□□□ -0.96
TLR4-202ENST00000394487 L3MBTL2Q969R5 705 aa9.01□□□□□ -0.97
TLR4-202ENST00000394487 FRAT2O75474 233 aaPredicted RBP9□□□□□ -0.97
TLR4-202ENST00000394487 DNTTIP2Q5QJE6 756 aaKnown RBP9□□□□□ -0.97
TLR4-202ENST00000394487 ZBED9Q6R2W3 1325 aa9□□□□□ -0.97
TLR4-202ENST00000394487 L1TD1Q5T7N2 865 aaKnown RBP9□□□□□ -0.97
TLR4-202ENST00000394487 SENP3Q9H4L4 574 aaPredicted RBP9□□□□□ -0.97
TLR4-202ENST00000394487 SMARCA4P51532 1647 aa9□□□□□ -0.97
TLR4-202ENST00000394487 RAPGEF2Q9Y4G8 1499 aa8.99□□□□□ -0.97
TLR4-202ENST00000394487 A0A0U1RQG5 324 aaPredicted RBP8.99□□□□□ -0.97
TLR4-202ENST00000394487 FBLN2P98095 1184 aa8.99□□□□□ -0.97
TLR4-202ENST00000394487 AKNAQ7Z591 1439 aa8.98□□□□□ -0.97
TLR4-202ENST00000394487 GOLGA6L3A6NEY3 463 aa8.98□□□□□ -0.97
TLR4-202ENST00000394487 PTMAP06454 111 aaKnown RBP8.97□□□□□ -0.97
TLR4-202ENST00000394487 CRBNQ96SW2 442 aa8.97□□□□□ -0.97
TLR4-202ENST00000394487 RRP1P56182 461 aaKnown RBP8.97□□□□□ -0.97
TLR4-202ENST00000394487 TNNT2P45379 298 aaPredicted RBP8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms