RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 TRIM26Q12899 539 aaPredicted RBP30.81■■■□□ 2.52
RAB5C-202ENST00000393860 FHAD1B1AJZ9 1412 aa30.77■■■□□ 2.52
RAB5C-202ENST00000393860 TTBK1Q5TCY1 1321 aaPredicted RBP30.76■■■□□ 2.51
RAB5C-202ENST00000393860 SNAPC4Q5SXM2 1469 aa30.74■■■□□ 2.51
RAB5C-202ENST00000393860 P3H3Q8IVL6 736 aa30.63■■■□□ 2.49
RAB5C-202ENST00000393860 MAGI1Q96QZ7 1491 aaPredicted RBP30.57■■■□□ 2.48
RAB5C-202ENST00000393860 EFCAB5A4FU69 1503 aa30.55■■■□□ 2.48
RAB5C-202ENST00000393860 FHOD3Q2V2M9 1422 aa30.55■■■□□ 2.48
RAB5C-202ENST00000393860 APLP2Q06481 763 aa30.54■■■□□ 2.48
RAB5C-202ENST00000393860 GRIN2AQ12879 1464 aa30.53■■■□□ 2.48
RAB5C-202ENST00000393860 SYNJ2O15056 1496 aa30.49■■■□□ 2.47
RAB5C-202ENST00000393860 IQGAP2Q13576 1575 aa30.49■■■□□ 2.47
RAB5C-202ENST00000393860 FBLN2P98095 1184 aa30.47■■■□□ 2.47
RAB5C-202ENST00000393860 SAMD9Q5K651 1589 aa30.47■■■□□ 2.47
RAB5C-202ENST00000393860 CHMP7Q8WUX9 453 aaPredicted RBP30.47■■■□□ 2.47
RAB5C-202ENST00000393860 PCF11O94913 1555 aaKnown RBP30.41■■■□□ 2.46
RAB5C-202ENST00000393860 CEP170Q5SW79 1584 aa30.39■■■□□ 2.45
RAB5C-202ENST00000393860 KIAA0586Q9BVV6 1533 aa30.36■■■□□ 2.45
RAB5C-202ENST00000393860 KANK4Q5T7N3 995 aaPredicted RBP30.34■■■□□ 2.45
RAB5C-202ENST00000393860 ATP1B4Q9UN42 357 aaPredicted RBP30.32■■■□□ 2.44
RAB5C-202ENST00000393860 UGGT2Q9NYU1 1516 aa30.3■■■□□ 2.44
RAB5C-202ENST00000393860 FMN1Q68DA7 1419 aa30.28■■■□□ 2.44
RAB5C-202ENST00000393860 TIAM1Q13009 1591 aa30.27■■■□□ 2.44
RAB5C-202ENST00000393860 NUP160Q12769 1436 aa30.26■■■□□ 2.43
RAB5C-202ENST00000393860 FYCO1Q9BQS8 1478 aa30.25■■■□□ 2.43
RAB5C-202ENST00000393860 CHD1O14646 1710 aa30.25■■■□□ 2.43
RAB5C-202ENST00000393860 CASKIN1Q8WXD9 1431 aa30.25■■■□□ 2.43
RAB5C-202ENST00000393860 CFAP43Q8NDM7 1665 aa30.21■■■□□ 2.43
RAB5C-202ENST00000393860 KIAA0556O60303 1618 aa30.19■■■□□ 2.42
RAB5C-202ENST00000393860 DISP1Q96F81 1524 aa30.19■■■□□ 2.42
RAB5C-202ENST00000393860 MAP3K1Q13233 1512 aa30.18■■■□□ 2.42
RAB5C-202ENST00000393860 LRRIQ1Q96JM4 1722 aa30.14■■■□□ 2.41
RAB5C-202ENST00000393860 LRRC9Q6ZRR7 1453 aa30.12■■■□□ 2.41
RAB5C-202ENST00000393860 JPH4Q96JJ6 628 aa30.07■■■□□ 2.4
RAB5C-202ENST00000393860 HRCP23327 699 aa30.02■■■□□ 2.4
RAB5C-202ENST00000393860 HECW1Q76N89 1606 aa30.01■■■□□ 2.39
RAB5C-202ENST00000393860 CARMIL2Q6F5E8 1435 aa29.97■■■□□ 2.39
RAB5C-202ENST00000393860 ARID3CA6NKF2 412 aa29.95■■■□□ 2.39
RAB5C-202ENST00000393860 HNRNPUL2Q1KMD3 747 aaKnown RBP29.95■■■□□ 2.39
RAB5C-202ENST00000393860 CDK13Q14004 1512 aaKnown RBP29.91■■■□□ 2.38
RAB5C-202ENST00000393860 RAPGEF6Q8TEU7 1601 aa29.91■■■□□ 2.38
RAB5C-202ENST00000393860 CCDC18Q5T9S5 1454 aa29.91■■■□□ 2.38
RAB5C-202ENST00000393860 PRG4Q92954 1404 aaPredicted RBP29.9■■■□□ 2.38
RAB5C-202ENST00000393860 EPRSP07814 1512 aaKnown RBP29.9■■■□□ 2.38
RAB5C-202ENST00000393860 MTUS2Q5JR59 1369 aa29.9■■■□□ 2.38
RAB5C-202ENST00000393860 PHLDB1Q86UU1 1377 aa29.9■■■□□ 2.38
RAB5C-202ENST00000393860 RRBP1Q9P2E9 1410 aaKnown RBP29.9■■■□□ 2.38
RAB5C-202ENST00000393860 MAGI3Q5TCQ9 1506 aa29.86■■■□□ 2.37
RAB5C-202ENST00000393860 PLB1Q6P1J6 1458 aa29.85■■■□□ 2.37
RAB5C-202ENST00000393860 SHROOM2Q13796 1616 aa29.85■■■□□ 2.37
RAB5C-202ENST00000393860 NUP153P49790 1475 aaKnown RBP29.84■■■□□ 2.37
RAB5C-202ENST00000393860 CCNB3Q8WWL7 1395 aa29.84■■■□□ 2.37
RAB5C-202ENST00000393860 EHBP1L1Q8N3D4 1523 aa29.82■■■□□ 2.36
RAB5C-202ENST00000393860 CLASP1Q7Z460 1538 aa29.81■■■□□ 2.36
RAB5C-202ENST00000393860 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.8■■■□□ 2.36
RAB5C-202ENST00000393860 ERCC6L2Q5T890 1561 aa29.77■■■□□ 2.36
RAB5C-202ENST00000393860 SUPT6HQ7KZ85 1726 aaKnown RBP29.76■■■□□ 2.36
RAB5C-202ENST00000393860 NCOA2Q15596 1464 aa29.74■■■□□ 2.35
RAB5C-202ENST00000393860 ABCA8O94911 1581 aa29.72■■■□□ 2.35
RAB5C-202ENST00000393860 ITGAEP38570 1179 aa29.71■■■□□ 2.35
RAB5C-202ENST00000393860 PTPRGP23470 1445 aa29.7■■■□□ 2.35
RAB5C-202ENST00000393860 FAM50AQ14320 339 aaKnown RBP29.69■■■□□ 2.34
RAB5C-202ENST00000393860 CCER1Q8TC90 406 aaPredicted RBP29.65■■■□□ 2.34
RAB5C-202ENST00000393860 ARHGEF11O15085 1522 aa29.63■■■□□ 2.33
RAB5C-202ENST00000393860 FGD6Q6ZV73 1430 aa29.63■■■□□ 2.33
RAB5C-202ENST00000393860 MYOM3Q5VTT5 1437 aa29.61■■■□□ 2.33
RAB5C-202ENST00000393860 CDK11AQ9UQ88 783 aaPredicted RBP29.55■■■□□ 2.32
RAB5C-202ENST00000393860 ATP10BO94823 1461 aa29.55■■■□□ 2.32
RAB5C-202ENST00000393860 UACAQ9BZF9 1416 aa29.52■■■□□ 2.32
RAB5C-202ENST00000393860 TROQ12816 1431 aaPredicted RBP29.52■■■□□ 2.32
RAB5C-202ENST00000393860 ZEB1P37275 1124 aaPredicted RBP29.51■■■□□ 2.31
RAB5C-202ENST00000393860 PTPN23Q9H3S7 1636 aa29.5■■■□□ 2.31
RAB5C-202ENST00000393860 KIF14Q15058 1648 aa29.48■■■□□ 2.31
RAB5C-202ENST00000393860 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.47■■■□□ 2.31
RAB5C-202ENST00000393860 OSCARQ8IYS5 282 aa29.46■■■□□ 2.31
RAB5C-202ENST00000393860 ABCC2Q92887 1545 aa29.44■■■□□ 2.3
RAB5C-202ENST00000393860 ADCY10Q96PN6 1610 aa29.43■■■□□ 2.3
RAB5C-202ENST00000393860 PLEKHD1A6NEE1 506 aa29.41■■■□□ 2.3
RAB5C-202ENST00000393860 TCOF1Q13428 1488 aaKnown RBP29.38■■■□□ 2.29
RAB5C-202ENST00000393860 MIA2Q96PC5 1412 aa29.36■■■□□ 2.29
RAB5C-202ENST00000393860 PTPRKQ15262 1439 aa29.35■■■□□ 2.29
RAB5C-202ENST00000393860 RAB3GAP2Q9H2M9 1393 aa29.33■■■□□ 2.29
RAB5C-202ENST00000393860 SETD5Q9C0A6 1442 aa29.31■■■□□ 2.28
RAB5C-202ENST00000393860 ITSN2Q9NZM3 1697 aa29.31■■■□□ 2.28
RAB5C-202ENST00000393860 ZCCHC11Q5TAX3 1644 aaKnown RBP29.29■■■□□ 2.28
RAB5C-202ENST00000393860 GPATCH8Q9UKJ3 1502 aaKnown RBP29.29■■■□□ 2.28
RAB5C-202ENST00000393860 UHRF1BP1LA0JNW5 1464 aa29.28■■■□□ 2.28
RAB5C-202ENST00000393860 ZNF644Q9H582 1327 aaPredicted RBP29.28■■■□□ 2.28
RAB5C-202ENST00000393860 ABCC10Q5T3U5 1492 aa29.27■■■□□ 2.28
RAB5C-202ENST00000393860 DHX57Q6P158 1386 aaKnown RBP29.26■■■□□ 2.27
RAB5C-202ENST00000393860 CDC42BPAQ5VT25 1732 aa29.26■■■□□ 2.27
RAB5C-202ENST00000393860 CFDP1Q9UEE9 299 aaPredicted RBP29.23■■■□□ 2.27
RAB5C-202ENST00000393860 KDM5BQ9UGL1 1544 aa29.21■■■□□ 2.27
RAB5C-202ENST00000393860 CAMSAP2Q08AD1 1489 aa29.2■■■□□ 2.27
RAB5C-202ENST00000393860 CHIC2Q9UKJ5 165 aa29.2■■■□□ 2.27
RAB5C-202ENST00000393860 ZNF777Q9ULD5 760 aaPredicted RBP29.2■■■□□ 2.27
RAB5C-202ENST00000393860 DNMT1P26358 1616 aaKnown RBP29.16■■■□□ 2.26
RAB5C-202ENST00000393860 TTC37Q6PGP7 1564 aa29.15■■■□□ 2.26
RAB5C-202ENST00000393860 HFM1A2PYH4 1435 aa29.14■■■□□ 2.26
RAB5C-202ENST00000393860 DAPK1P53355 1430 aa29.14■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms