RNA–Protein interactions for RNA: ENST00000392901.10

SHTN1-203, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-203ENST00000392901 GRIN2BQ13224 1484 aa27.24■■□□□ 1.95
SHTN1-203ENST00000392901 P3H3Q8IVL6 736 aa27.22■■□□□ 1.95
SHTN1-203ENST00000392901 CTTNBP2Q8WZ74 1663 aa27.2■■□□□ 1.95
SHTN1-203ENST00000392901 FHAD1B1AJZ9 1412 aa27.2■■□□□ 1.94
SHTN1-203ENST00000392901 ADAMTS12P58397 1594 aa27.14■■□□□ 1.94
SHTN1-203ENST00000392901 EIF4G3O43432 1585 aaKnown RBP27.14■■□□□ 1.94
SHTN1-203ENST00000392901 FHOD3Q2V2M9 1422 aa27.09■■□□□ 1.93
SHTN1-203ENST00000392901 SNAPC4Q5SXM2 1469 aa27.08■■□□□ 1.93
SHTN1-203ENST00000392901 EFCAB5A4FU69 1503 aa27.06■■□□□ 1.92
SHTN1-203ENST00000392901 KANK4Q5T7N3 995 aaPredicted RBP27.06■■□□□ 1.92
SHTN1-203ENST00000392901 ATP1B4Q9UN42 357 aaPredicted RBP26.99■■□□□ 1.91
SHTN1-203ENST00000392901 MAGI1Q96QZ7 1491 aaPredicted RBP26.95■■□□□ 1.9
SHTN1-203ENST00000392901 CHMP7Q8WUX9 453 aaPredicted RBP26.94■■□□□ 1.9
SHTN1-203ENST00000392901 SAMD9Q5K651 1589 aa26.94■■□□□ 1.9
SHTN1-203ENST00000392901 FBLN2P98095 1184 aa26.93■■□□□ 1.9
SHTN1-203ENST00000392901 GRIN2AQ12879 1464 aa26.93■■□□□ 1.9
SHTN1-203ENST00000392901 PCF11O94913 1555 aaKnown RBP26.93■■□□□ 1.9
SHTN1-203ENST00000392901 IQGAP2Q13576 1575 aa26.93■■□□□ 1.9
SHTN1-203ENST00000392901 FMN1Q68DA7 1419 aa26.9■■□□□ 1.9
SHTN1-203ENST00000392901 TIAM1Q13009 1591 aa26.88■■□□□ 1.89
SHTN1-203ENST00000392901 SYNJ2O15056 1496 aa26.88■■□□□ 1.89
SHTN1-203ENST00000392901 CASKIN1Q8WXD9 1431 aa26.86■■□□□ 1.89
SHTN1-203ENST00000392901 MAP3K1Q13233 1512 aa26.85■■□□□ 1.89
SHTN1-203ENST00000392901 FYCO1Q9BQS8 1478 aa26.85■■□□□ 1.89
SHTN1-203ENST00000392901 KIAA0586Q9BVV6 1533 aa26.84■■□□□ 1.89
SHTN1-203ENST00000392901 HNRNPUL2Q1KMD3 747 aaKnown RBP26.82■■□□□ 1.88
SHTN1-203ENST00000392901 ZEB1P37275 1124 aaPredicted RBP26.81■■□□□ 1.88
SHTN1-203ENST00000392901 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.81■■□□□ 1.88
SHTN1-203ENST00000392901 LRRC9Q6ZRR7 1453 aa26.79■■□□□ 1.88
SHTN1-203ENST00000392901 UGGT2Q9NYU1 1516 aa26.76■■□□□ 1.88
SHTN1-203ENST00000392901 CFAP43Q8NDM7 1665 aa26.75■■□□□ 1.87
SHTN1-203ENST00000392901 CEP170Q5SW79 1584 aa26.75■■□□□ 1.87
SHTN1-203ENST00000392901 CCER1Q8TC90 406 aaPredicted RBP26.71■■□□□ 1.87
SHTN1-203ENST00000392901 NUP160Q12769 1436 aa26.68■■□□□ 1.86
SHTN1-203ENST00000392901 RRBP1Q9P2E9 1410 aaKnown RBP26.68■■□□□ 1.86
SHTN1-203ENST00000392901 DISP1Q96F81 1524 aa26.67■■□□□ 1.86
SHTN1-203ENST00000392901 KIAA0556O60303 1618 aa26.64■■□□□ 1.86
SHTN1-203ENST00000392901 CCNB3Q8WWL7 1395 aa26.64■■□□□ 1.85
SHTN1-203ENST00000392901 JPH4Q96JJ6 628 aa26.63■■□□□ 1.85
SHTN1-203ENST00000392901 LRRIQ1Q96JM4 1722 aa26.62■■□□□ 1.85
SHTN1-203ENST00000392901 PHLDB1Q86UU1 1377 aa26.61■■□□□ 1.85
SHTN1-203ENST00000392901 MTUS2Q5JR59 1369 aa26.6■■□□□ 1.85
SHTN1-203ENST00000392901 ARID3CA6NKF2 412 aa26.56■■□□□ 1.84
SHTN1-203ENST00000392901 HECW1Q76N89 1606 aa26.55■■□□□ 1.84
SHTN1-203ENST00000392901 ITGAEP38570 1179 aa26.54■■□□□ 1.84
SHTN1-203ENST00000392901 CCDC18Q5T9S5 1454 aa26.52■■□□□ 1.84
SHTN1-203ENST00000392901 CARMIL2Q6F5E8 1435 aa26.52■■□□□ 1.84
SHTN1-203ENST00000392901 CHD1O14646 1710 aa26.51■■□□□ 1.83
SHTN1-203ENST00000392901 EPRSP07814 1512 aaKnown RBP26.5■■□□□ 1.83
SHTN1-203ENST00000392901 FAM50AQ14320 339 aaKnown RBP26.49■■□□□ 1.83
SHTN1-203ENST00000392901 CDK13Q14004 1512 aaKnown RBP26.47■■□□□ 1.83
SHTN1-203ENST00000392901 MAGI3Q5TCQ9 1506 aa26.44■■□□□ 1.82
SHTN1-203ENST00000392901 EHBP1L1Q8N3D4 1523 aa26.44■■□□□ 1.82
SHTN1-203ENST00000392901 RAPGEF6Q8TEU7 1601 aa26.42■■□□□ 1.82
SHTN1-203ENST00000392901 NCOA2Q15596 1464 aa26.42■■□□□ 1.82
SHTN1-203ENST00000392901 NUP153P49790 1475 aaKnown RBP26.4■■□□□ 1.82
SHTN1-203ENST00000392901 PLB1Q6P1J6 1458 aa26.4■■□□□ 1.82
SHTN1-203ENST00000392901 PRG4Q92954 1404 aaPredicted RBP26.39■■□□□ 1.81
SHTN1-203ENST00000392901 SUPT6HQ7KZ85 1726 aaKnown RBP26.39■■□□□ 1.81
SHTN1-203ENST00000392901 FGD6Q6ZV73 1430 aa26.36■■□□□ 1.81
SHTN1-203ENST00000392901 MYOM3Q5VTT5 1437 aa26.32■■□□□ 1.8
SHTN1-203ENST00000392901 CDK11AQ9UQ88 783 aaPredicted RBP26.3■■□□□ 1.8
SHTN1-203ENST00000392901 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.29■■□□□ 1.8
SHTN1-203ENST00000392901 ARHGEF11O15085 1522 aa26.28■■□□□ 1.8
SHTN1-203ENST00000392901 PTPRGP23470 1445 aa26.26■■□□□ 1.79
SHTN1-203ENST00000392901 SHROOM2Q13796 1616 aa26.23■■□□□ 1.79
SHTN1-203ENST00000392901 ABCA8O94911 1581 aa26.22■■□□□ 1.79
SHTN1-203ENST00000392901 RAB3GAP2Q9H2M9 1393 aa26.2■■□□□ 1.78
SHTN1-203ENST00000392901 DHX57Q6P158 1386 aaKnown RBP26.19■■□□□ 1.78
SHTN1-203ENST00000392901 SETD5Q9C0A6 1442 aa26.18■■□□□ 1.78
SHTN1-203ENST00000392901 PTPN23Q9H3S7 1636 aa26.17■■□□□ 1.78
SHTN1-203ENST00000392901 ERCC6L2Q5T890 1561 aa26.17■■□□□ 1.78
SHTN1-203ENST00000392901 CLASP1Q7Z460 1538 aa26.16■■□□□ 1.78
SHTN1-203ENST00000392901 TROQ12816 1431 aaPredicted RBP26.16■■□□□ 1.78
SHTN1-203ENST00000392901 ATP10BO94823 1461 aa26.14■■□□□ 1.77
SHTN1-203ENST00000392901 PLEKHD1A6NEE1 506 aa26.12■■□□□ 1.77
SHTN1-203ENST00000392901 PTPRKQ15262 1439 aa26.12■■□□□ 1.77
SHTN1-203ENST00000392901 MIA2Q96PC5 1412 aa26.11■■□□□ 1.77
SHTN1-203ENST00000392901 TCOF1Q13428 1488 aaKnown RBP26.09■■□□□ 1.77
SHTN1-203ENST00000392901 UACAQ9BZF9 1416 aa26.08■■□□□ 1.77
SHTN1-203ENST00000392901 CLSPNQ9HAW4 1339 aa26.06■■□□□ 1.76
SHTN1-203ENST00000392901 KIF14Q15058 1648 aa26.04■■□□□ 1.76
SHTN1-203ENST00000392901 CHIC2Q9UKJ5 165 aa26.02■■□□□ 1.76
SHTN1-203ENST00000392901 ZNF644Q9H582 1327 aaPredicted RBP26.01■■□□□ 1.75
SHTN1-203ENST00000392901 CFDP1Q9UEE9 299 aaPredicted RBP25.99■■□□□ 1.75
SHTN1-203ENST00000392901 ADCY10Q96PN6 1610 aa25.99■■□□□ 1.75
SHTN1-203ENST00000392901 HFM1A2PYH4 1435 aa25.98■■□□□ 1.75
SHTN1-203ENST00000392901 GPATCH8Q9UKJ3 1502 aaKnown RBP25.97■■□□□ 1.75
SHTN1-203ENST00000392901 RRP7BPQ9NSQ0 103 aa25.96■■□□□ 1.75
SHTN1-203ENST00000392901 ZNF777Q9ULD5 760 aaPredicted RBP25.95■■□□□ 1.74
SHTN1-203ENST00000392901 ABCC2Q92887 1545 aa25.95■■□□□ 1.74
SHTN1-203ENST00000392901 OSCARQ8IYS5 282 aa25.94■■□□□ 1.74
SHTN1-203ENST00000392901 NAIPQ13075 1403 aa25.94■■□□□ 1.74
SHTN1-203ENST00000392901 ITSN2Q9NZM3 1697 aa25.92■■□□□ 1.74
SHTN1-203ENST00000392901 ABCC10Q5T3U5 1492 aa25.9■■□□□ 1.74
SHTN1-203ENST00000392901 DAPK1P53355 1430 aa25.89■■□□□ 1.74
SHTN1-203ENST00000392901 CAMSAP2Q08AD1 1489 aa25.88■■□□□ 1.73
SHTN1-203ENST00000392901 MAPKBP1O60336 1514 aa25.88■■□□□ 1.73
SHTN1-203ENST00000392901 ABCC5O15440 1437 aa25.87■■□□□ 1.73
SHTN1-203ENST00000392901 DNMT1P26358 1616 aaKnown RBP25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms