RNA–Protein interactions for RNA: ENST00000392520.2

CIT-202, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 5,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-202ENST00000392520 TSPY10P0CW01 314 aa19.65■□□□□ 0.74
CIT-202ENST00000392520 MTUS2Q5JR59 1369 aa19.64■□□□□ 0.74
CIT-202ENST00000392520 CLIP1P30622 1438 aa19.63■□□□□ 0.73
CIT-202ENST00000392520 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.62■□□□□ 0.732e-8■■■■□ 19.6
CIT-202ENST00000392520 TNNT2P45379 298 aaPredicted RBP19.61■□□□□ 0.73
CIT-202ENST00000392520 SUPT16HQ9Y5B9 1047 aaKnown RBP19.59■□□□□ 0.73
CIT-202ENST00000392520 PPP4R2Q9NY27 417 aa19.57■□□□□ 0.72
CIT-202ENST00000392520 SCRIBQ14160 1630 aa19.54■□□□□ 0.72
CIT-202ENST00000392520 NOP58Q9Y2X3 529 aaKnown RBP19.52■□□□□ 0.72
CIT-202ENST00000392520 PTMAP06454 111 aaKnown RBP19.51■□□□□ 0.71
CIT-202ENST00000392520 CCDC180Q9P1Z9 1646 aa19.5■□□□□ 0.71
CIT-202ENST00000392520 ZCCHC6Q5VYS8 1495 aaKnown RBP19.5■□□□□ 0.71
CIT-202ENST00000392520 CDK11BP21127 795 aaKnown RBP19.49■□□□□ 0.71
CIT-202ENST00000392520 EEA1Q15075 1411 aa19.49■□□□□ 0.71
CIT-202ENST00000392520 RRP7BPQ9NSQ0 103 aa19.47■□□□□ 0.71
CIT-202ENST00000392520 NPM1P06748 294 aaKnown RBP eCLIP19.46■□□□□ 0.71
CIT-202ENST00000392520 CEP162Q5TB80 1403 aa19.46■□□□□ 0.71
CIT-202ENST00000392520 NAP1L5Q96NT1 182 aaPredicted RBP19.45■□□□□ 0.7
CIT-202ENST00000392520 DNTTIP2Q5QJE6 756 aaKnown RBP19.45■□□□□ 0.7
CIT-202ENST00000392520 LAS1LQ9Y4W2 734 aaKnown RBP19.44■□□□□ 0.7
CIT-202ENST00000392520 GOLGA3Q08378 1498 aa19.44■□□□□ 0.7
CIT-202ENST00000392520 CDCA8Q53HL2 280 aa19.43■□□□□ 0.7
CIT-202ENST00000392520 CFAP53Q96M91 514 aa19.43■□□□□ 0.7
CIT-202ENST00000392520 RSF1Q96T23 1441 aaPredicted RBP19.43■□□□□ 0.7
CIT-202ENST00000392520 CASC1Q6TDU7 716 aa19.42■□□□□ 0.7
CIT-202ENST00000392520 MYO15BQ96JP2 1530 aa19.42■□□□□ 0.7
CIT-202ENST00000392520 ZRSR1Q15695 479 aaKnown RBP19.4■□□□□ 0.7
CIT-202ENST00000392520 KNSTRNQ9Y448 316 aa19.4■□□□□ 0.7
CIT-202ENST00000392520 RTN4Q9NQC3 1192 aaKnown RBP19.39■□□□□ 0.69
CIT-202ENST00000392520 FTSJ3Q8IY81 847 aaKnown RBP19.38■□□□□ 0.69
CIT-202ENST00000392520 RGS3P49796 1198 aa19.34■□□□□ 0.69
CIT-202ENST00000392520 CARD11Q9BXL7 1154 aa19.32■□□□□ 0.68
CIT-202ENST00000392520 TNIKQ9UKE5 1360 aa19.31■□□□□ 0.68
CIT-202ENST00000392520 SENP3-EIF4A1A0A087X0R7 540 aa19.3■□□□□ 0.68
CIT-202ENST00000392520 B4GALNT3Q6L9W6 998 aa19.3■□□□□ 0.68
CIT-202ENST00000392520 RGL3Q3MIN7 710 aa19.3■□□□□ 0.68
CIT-202ENST00000392520 CHMP4BQ9H444 224 aaKnown RBP19.3■□□□□ 0.68
CIT-202ENST00000392520 DEKP35659 375 aaKnown RBP19.29■□□□□ 0.68
CIT-202ENST00000392520 MS4A1P11836 297 aa19.28■□□□□ 0.68
CIT-202ENST00000392520 L1TD1Q5T7N2 865 aaKnown RBP19.27■□□□□ 0.68
CIT-202ENST00000392520 HSP90AB1P08238 724 aaKnown RBP19.26■□□□□ 0.67
CIT-202ENST00000392520 RBM19Q9Y4C8 960 aaKnown RBP19.26■□□□□ 0.67
CIT-202ENST00000392520 CCER2I3L3R5 266 aa19.26■□□□□ 0.67
CIT-202ENST00000392520 PLPPR3Q6T4P5 718 aa19.24■□□□□ 0.67
CIT-202ENST00000392520 MAPK8IP3Q9UPT6 1336 aa19.24■□□□□ 0.67
CIT-202ENST00000392520 TIMELESSQ9UNS1 1208 aa19.24■□□□□ 0.67
CIT-202ENST00000392520 NUDCQ9Y266 331 aa19.23■□□□□ 0.67
CIT-202ENST00000392520 PLEKHD1A6NEE1 506 aa19.23■□□□□ 0.67
CIT-202ENST00000392520 FRAT1Q92837 279 aaPredicted RBP19.23■□□□□ 0.67
CIT-202ENST00000392520 SIN3AQ96ST3 1273 aa19.23■□□□□ 0.67
CIT-202ENST00000392520 NEUROD2Q15784 382 aa19.22■□□□□ 0.67
CIT-202ENST00000392520 PLCB2Q00722 1185 aa19.21■□□□□ 0.67
CIT-202ENST00000392520 GOLGA6L6A8MZA4 724 aa19.21■□□□□ 0.67
CIT-202ENST00000392520 CHMP7Q8WUX9 453 aaPredicted RBP19.21■□□□□ 0.67
CIT-202ENST00000392520 NRDCO43847 1150 aa19.2■□□□□ 0.66
CIT-202ENST00000392520 CEP164Q9UPV0 1460 aa19.2■□□□□ 0.66
CIT-202ENST00000392520 HSCBQ8IWL3 235 aa19.19■□□□□ 0.66
CIT-202ENST00000392520 PPP1R15AO75807 674 aaPredicted RBP19.18■□□□□ 0.66
CIT-202ENST00000392520 TPRNQ4KMQ1 711 aa19.18■□□□□ 0.66
CIT-202ENST00000392520 CFDP1Q9UEE9 299 aaPredicted RBP19.17■□□□□ 0.66
CIT-202ENST00000392520 CHAF1AQ13111 956 aaPredicted RBP19.17■□□□□ 0.66
CIT-202ENST00000392520 MSNP26038 577 aaKnown RBP19.16■□□□□ 0.66
CIT-202ENST00000392520 WRNQ14191 1432 aaPredicted RBP eCLIP19.15■□□□□ 0.66
CIT-202ENST00000392520 C14orf37Q86TY3 774 aa19.14■□□□□ 0.65
CIT-202ENST00000392520 ZBTB7CA1YPR0 619 aa19.12■□□□□ 0.65
CIT-202ENST00000392520 KIF27Q86VH2 1401 aa19.1■□□□□ 0.65
CIT-202ENST00000392520 CCNB3Q8WWL7 1395 aa19.1■□□□□ 0.65
CIT-202ENST00000392520 CC2D1BQ5T0F9 858 aaKnown RBP19.1■□□□□ 0.65
CIT-202ENST00000392520 CFAP44Q96MT7 982 aa19.09■□□□□ 0.65
CIT-202ENST00000392520 PNNQ9H307 717 aaKnown RBP19.09■□□□□ 0.65
CIT-202ENST00000392520 GOLGA6L4A6NEF3 574 aa19.08■□□□□ 0.64
CIT-202ENST00000392520 KCNH8Q96L42 1107 aa19.07■□□□□ 0.64
CIT-202ENST00000392520 A0A0G2JS52 829 aa19.07■□□□□ 0.64
CIT-202ENST00000392520 FGD1P98174 961 aa19.06■□□□□ 0.64
CIT-202ENST00000392520 TMF1P82094 1093 aa19.06■□□□□ 0.64
CIT-202ENST00000392520 PTMSP20962 102 aa19.05■□□□□ 0.64
CIT-202ENST00000392520 KCNJ4P48050 445 aa19.04■□□□□ 0.64
CIT-202ENST00000392520 SENP3Q9H4L4 574 aaPredicted RBP19.04■□□□□ 0.64
CIT-202ENST00000392520 TCERG1O14776 1098 aaKnown RBP19.04■□□□□ 0.64
CIT-202ENST00000392520 MCCP23508 829 aa19.03■□□□□ 0.64
CIT-202ENST00000392520 U2SURPO15042 1029 aaKnown RBP19.02■□□□□ 0.63
CIT-202ENST00000392520 OS9Q13438 667 aaPredicted RBP19.02■□□□□ 0.63
CIT-202ENST00000392520 GBP4Q96PP9 640 aa19.01■□□□□ 0.63
CIT-202ENST00000392520 TSHZ2Q9NRE2 1034 aa18.99■□□□□ 0.63
CIT-202ENST00000392520 POGKQ9P215 609 aa18.98■□□□□ 0.63
CIT-202ENST00000392520 PLEKHG5O94827 1062 aa18.98■□□□□ 0.63
CIT-202ENST00000392520 FHAD1B1AJZ9 1412 aa18.98■□□□□ 0.63
CIT-202ENST00000392520 SPRYD3Q8NCJ5 442 aa18.97■□□□□ 0.63
CIT-202ENST00000392520 HAP1P54257 671 aaPredicted RBP18.97■□□□□ 0.63
CIT-202ENST00000392520 HSPA5P11021 654 aaKnown RBP18.96■□□□□ 0.63
CIT-202ENST00000392520 DCAF11Q8TEB1 546 aa18.96■□□□□ 0.63
CIT-202ENST00000392520 RCAN3Q9UKA8 241 aa18.95■□□□□ 0.62
CIT-202ENST00000392520 DRC7Q8IY82 874 aa18.95■□□□□ 0.62
CIT-202ENST00000392520 SETD5Q9C0A6 1442 aa18.94■□□□□ 0.62
CIT-202ENST00000392520 KIAA2012Q0VF49 1180 aa18.94■□□□□ 0.62
CIT-202ENST00000392520 IPO9Q96P70 1041 aaKnown RBP18.93■□□□□ 0.62
CIT-202ENST00000392520 KTN1Q86UP2 1357 aaKnown RBP18.92■□□□□ 0.62
CIT-202ENST00000392520 NAP1L2Q9ULW6 460 aaPredicted RBP18.92■□□□□ 0.62
CIT-202ENST00000392520 IPO8O15397 1037 aaKnown RBP18.91■□□□□ 0.62
CIT-202ENST00000392520 RWDD1Q9H446 243 aaPredicted RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms