RNA–Protein interactions for RNA: ENST00000392025.5

SPTBN4-204, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SPTBN4, Length 8,671 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-204ENST00000392025 CASC1Q6TDU7 716 aa23.28■■□□□ 1.32
SPTBN4-204ENST00000392025 P3H3Q8IVL6 736 aa23.27■■□□□ 1.32
SPTBN4-204ENST00000392025 ARID3CA6NKF2 412 aa23.25■■□□□ 1.31
SPTBN4-204ENST00000392025 MSNP26038 577 aaKnown RBP23.23■■□□□ 1.31
SPTBN4-204ENST00000392025 DCAF1Q9Y4B6 1507 aa23.21■■□□□ 1.31
SPTBN4-204ENST00000392025 TSPY4P0CV99 314 aa23.21■■□□□ 1.31
SPTBN4-204ENST00000392025 TSPY10P0CW01 314 aa23.21■■□□□ 1.31
SPTBN4-204ENST00000392025 TNNT3P45378 269 aaPredicted RBP23.17■■□□□ 1.3
SPTBN4-204ENST00000392025 C14orf37Q86TY3 774 aa23.17■■□□□ 1.3
SPTBN4-204ENST00000392025 NOP58Q9Y2X3 529 aaKnown RBP23.16■■□□□ 1.3
SPTBN4-204ENST00000392025 HAP1P54257 671 aaPredicted RBP23.16■■□□□ 1.3
SPTBN4-204ENST00000392025 PPP1R15AO75807 674 aaPredicted RBP23.13■■□□□ 1.29
SPTBN4-204ENST00000392025 FAM9BQ8IZU0 186 aa23.13■■□□□ 1.29
SPTBN4-204ENST00000392025 CSRNP3Q8WYN3 585 aa23.13■■□□□ 1.29
SPTBN4-204ENST00000392025 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.12■■□□□ 1.29
SPTBN4-204ENST00000392025 PTMSP20962 102 aa23.11■■□□□ 1.29
SPTBN4-204ENST00000392025 USP35Q9P2H5 1018 aa23.11■■□□□ 1.29
SPTBN4-204ENST00000392025 CDCA8Q53HL2 280 aa23.07■■□□□ 1.28
SPTBN4-204ENST00000392025 NPHP1O15259 732 aa23.04■■□□□ 1.28
SPTBN4-204ENST00000392025 CFAP53Q96M91 514 aa23.04■■□□□ 1.28
SPTBN4-204ENST00000392025 CHMP4BQ9H444 224 aaKnown RBP23.04■■□□□ 1.28
SPTBN4-204ENST00000392025 MTUS2Q5JR59 1369 aa23.03■■□□□ 1.28
SPTBN4-204ENST00000392025 RTN4Q9NQC3 1192 aaKnown RBP23■■□□□ 1.27
SPTBN4-204ENST00000392025 CALRP27797 417 aaKnown RBP23■■□□□ 1.27
SPTBN4-204ENST00000392025 ARID4BQ4LE39 1312 aaPredicted RBP22.99■■□□□ 1.27
SPTBN4-204ENST00000392025 SALL2Q9Y467 1007 aaPredicted RBP22.98■■□□□ 1.27
SPTBN4-204ENST00000392025 RSF1Q96T23 1441 aaPredicted RBP22.97■■□□□ 1.27
SPTBN4-204ENST00000392025 MRS2Q9HD23 443 aa22.95■■□□□ 1.26
SPTBN4-204ENST00000392025 CHMP7Q8WUX9 453 aaPredicted RBP22.95■■□□□ 1.26
SPTBN4-204ENST00000392025 ZBTB7CA1YPR0 619 aa22.94■■□□□ 1.26
SPTBN4-204ENST00000392025 FTSJ3Q8IY81 847 aaKnown RBP22.94■■□□□ 1.26
SPTBN4-204ENST00000392025 DDX10Q13206 875 aaKnown RBP22.93■■□□□ 1.26
SPTBN4-204ENST00000392025 DEKP35659 375 aaKnown RBP22.93■■□□□ 1.26
SPTBN4-204ENST00000392025 CFAP44Q96MT7 982 aa22.93■■□□□ 1.26
SPTBN4-204ENST00000392025 GOLGA2Q08379 1002 aa22.93■■□□□ 1.26
SPTBN4-204ENST00000392025 PNNQ9H307 717 aaKnown RBP22.93■■□□□ 1.26
SPTBN4-204ENST00000392025 EIF4G2P78344 907 aaKnown RBP eCLIP22.92■■□□□ 1.26
SPTBN4-204ENST00000392025 SETQ01105 290 aaPredicted RBP22.91■■□□□ 1.26
SPTBN4-204ENST00000392025 KIAA2012Q0VF49 1180 aa22.9■■□□□ 1.26
SPTBN4-204ENST00000392025 KAT6BQ8WYB5 2073 aa22.89■■□□□ 1.26
SPTBN4-204ENST00000392025 KDM2AQ9Y2K7 1162 aa22.89■■□□□ 1.26
SPTBN4-204ENST00000392025 GOLGA6L1Q8N7Z2 621 aa22.89■■□□□ 1.25
SPTBN4-204ENST00000392025 RB1CC1Q8TDY2 1594 aa22.87■■□□□ 1.25
SPTBN4-204ENST00000392025 AMER1Q5JTC6 1135 aaPredicted RBP22.86■■□□□ 1.25
SPTBN4-204ENST00000392025 RSPH6AQ9H0K4 717 aa22.86■■□□□ 1.25
SPTBN4-204ENST00000392025 TULP1O00294 542 aaPredicted RBP22.84■■□□□ 1.25
SPTBN4-204ENST00000392025 HSP90AB1P08238 724 aaKnown RBP22.83■■□□□ 1.25
SPTBN4-204ENST00000392025 MS4A1P11836 297 aa22.83■■□□□ 1.25
SPTBN4-204ENST00000392025 PPP4R2Q9NY27 417 aa22.82■■□□□ 1.24
SPTBN4-204ENST00000392025 KNSTRNQ9Y448 316 aa22.82■■□□□ 1.24
SPTBN4-204ENST00000392025 FGD1P98174 961 aa22.8■■□□□ 1.24
SPTBN4-204ENST00000392025 PLCB2Q00722 1185 aa22.8■■□□□ 1.24
SPTBN4-204ENST00000392025 HSP90AA2PQ14568 343 aaPredicted RBP22.78■■□□□ 1.24
SPTBN4-204ENST00000392025 HSCBQ8IWL3 235 aa22.78■■□□□ 1.24
SPTBN4-204ENST00000392025 GOLGA6L4A6NEF3 574 aa22.76■■□□□ 1.23
SPTBN4-204ENST00000392025 DRC7Q8IY82 874 aa22.76■■□□□ 1.23
SPTBN4-204ENST00000392025 NUDCQ9Y266 331 aa22.76■■□□□ 1.23
SPTBN4-204ENST00000392025 MAPK8IP3Q9UPT6 1336 aa22.76■■□□□ 1.23
SPTBN4-204ENST00000392025 CHIC2Q9UKJ5 165 aa22.76■■□□□ 1.23
SPTBN4-204ENST00000392025 LAS1LQ9Y4W2 734 aaKnown RBP22.76■■□□□ 1.23
SPTBN4-204ENST00000392025 SYAP1Q96A49 352 aaPredicted RBP22.74■■□□□ 1.23
SPTBN4-204ENST00000392025 GBP4Q96PP9 640 aa22.71■■□□□ 1.23
SPTBN4-204ENST00000392025 KCNJ4P48050 445 aa22.71■■□□□ 1.23
SPTBN4-204ENST00000392025 OS9Q13438 667 aaPredicted RBP22.71■■□□□ 1.23
SPTBN4-204ENST00000392025 HDGFP51858 240 aaKnown RBP22.7■■□□□ 1.22
SPTBN4-204ENST00000392025 PLEKHD1A6NEE1 506 aa22.69■■□□□ 1.22
SPTBN4-204ENST00000392025 NOC3LQ8WTT2 800 aaKnown RBP22.69■■□□□ 1.22
SPTBN4-204ENST00000392025 A0A0U1RQG5 324 aaPredicted RBP22.68■■□□□ 1.22
SPTBN4-204ENST00000392025 PLEKHG5O94827 1062 aa22.67■■□□□ 1.22
SPTBN4-204ENST00000392025 MIER1Q8N108 512 aa22.67■■□□□ 1.22
SPTBN4-204ENST00000392025 IRX6P78412 446 aaPredicted RBP22.66■■□□□ 1.22
SPTBN4-204ENST00000392025 MCCP23508 829 aa22.64■■□□□ 1.22
SPTBN4-204ENST00000392025 GOLGA6L3A6NEY3 463 aa22.63■■□□□ 1.21
SPTBN4-204ENST00000392025 CLSTN1O94985 981 aa22.63■■□□□ 1.21
SPTBN4-204ENST00000392025 KANK1Q14678 1352 aa22.61■■□□□ 1.21
SPTBN4-204ENST00000392025 TMX4Q9H1E5 349 aaPredicted RBP22.6■■□□□ 1.21
SPTBN4-204ENST00000392025 POGKQ9P215 609 aa22.6■■□□□ 1.21
SPTBN4-204ENST00000392025 ERCC6Q03468 1493 aa22.58■■□□□ 1.21
SPTBN4-204ENST00000392025 EEA1Q15075 1411 aa22.58■■□□□ 1.21
SPTBN4-204ENST00000392025 HTATSF1O43719 755 aaKnown RBP22.58■■□□□ 1.2
SPTBN4-204ENST00000392025 PHF14O94880 888 aa22.57■■□□□ 1.2
SPTBN4-204ENST00000392025 TPM4P67936 248 aa22.56■■□□□ 1.2
SPTBN4-204ENST00000392025 CLIP1P30622 1438 aa22.56■■□□□ 1.2
SPTBN4-204ENST00000392025 LMOD2Q6P5Q4 547 aa22.55■■□□□ 1.2
SPTBN4-204ENST00000392025 CHMP4AQ9BY43 222 aa22.55■■□□□ 1.2
SPTBN4-204ENST00000392025 NAP1L2Q9ULW6 460 aaPredicted RBP22.55■■□□□ 1.2
SPTBN4-204ENST00000392025 SUPT16HQ9Y5B9 1047 aaKnown RBP22.54■■□□□ 1.2
SPTBN4-204ENST00000392025 KCNH8Q96L42 1107 aa22.54■■□□□ 1.2
SPTBN4-204ENST00000392025 GNL2Q13823 731 aaKnown RBP22.53■■□□□ 1.2
SPTBN4-204ENST00000392025 GPS2Q13227 327 aa22.52■■□□□ 1.2
SPTBN4-204ENST00000392025 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.52■■□□□ 1.19
SPTBN4-204ENST00000392025 ZCCHC6Q5VYS8 1495 aaKnown RBP22.51■■□□□ 1.19
SPTBN4-204ENST00000392025 CCDC34Q96HJ3 373 aa22.51■■□□□ 1.19
SPTBN4-204ENST00000392025 GOLGA3Q08378 1498 aa22.5■■□□□ 1.19
SPTBN4-204ENST00000392025 CSPP1Q1MSJ5 1256 aa22.48■■□□□ 1.19
SPTBN4-204ENST00000392025 NCBP3Q53F19 620 aaKnown RBP22.46■■□□□ 1.19
SPTBN4-204ENST00000392025 NOM1Q5C9Z4 860 aaKnown RBP22.46■■□□□ 1.19
SPTBN4-204ENST00000392025 CFDP1Q9UEE9 299 aaPredicted RBP22.45■■□□□ 1.18
SPTBN4-204ENST00000392025 RBM19Q9Y4C8 960 aaKnown RBP22.43■■□□□ 1.18
SPTBN4-204ENST00000392025 RRP7BPQ9NSQ0 103 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms