RNA–Protein interactions for RNA: ENST00000391218.1

RNU6-1250P-201, Transcript of RNA, U6 small nuclear 1250, pseudogene, humanhuman

BASIC

Gene RNU6-1250P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1250P-201ENST00000391218 POTEBQ6S5H4 581 aa3.24□□□□□ -1.89
RNU6-1250P-201ENST00000391218 HS3ST6Q96QI5 342 aa3.22□□□□□ -1.89
RNU6-1250P-201ENST00000391218 EMP3P54852 163 aa3.2□□□□□ -1.9
RNU6-1250P-201ENST00000391218 ZNF579Q8NAF0 562 aaKnown RBP3.19□□□□□ -1.9
RNU6-1250P-201ENST00000391218 SLAIN1Q8ND83 568 aa3.19□□□□□ -1.9
RNU6-1250P-201ENST00000391218 FAM205CA6NFA0 338 aa3.17□□□□□ -1.9
RNU6-1250P-201ENST00000391218 LCE2BO14633 110 aa3.17□□□□□ -1.9
RNU6-1250P-201ENST00000391218 STK17AQ9UEE5 414 aa3.15□□□□□ -1.91
RNU6-1250P-201ENST00000391218 CLEC11AQ9Y240 323 aa3.15□□□□□ -1.91
RNU6-1250P-201ENST00000391218 ZNF787Q6DD87 383 aa3.12□□□□□ -1.91
RNU6-1250P-201ENST00000391218 KRTAP4-9Q9BYQ8 210 aa3.12□□□□□ -1.91
RNU6-1250P-201ENST00000391218 ANO8Q9HCE9 1232 aaPredicted RBP3.12□□□□□ -1.91
RNU6-1250P-201ENST00000391218 LCE1DQ5T752 114 aa3.11□□□□□ -1.91
RNU6-1250P-201ENST00000391218 POTEFA5A3E0 1075 aa3.09□□□□□ -1.91
RNU6-1250P-201ENST00000391218 APLP2Q06481 763 aa3.09□□□□□ -1.91
RNU6-1250P-201ENST00000391218 TRAF7Q6Q0C0 670 aa3.09□□□□□ -1.91
RNU6-1250P-201ENST00000391218 KRTAP4-12Q9BQ66 201 aa3.09□□□□□ -1.91
RNU6-1250P-201ENST00000391218 ZRANB1Q9UGI0 708 aa3.09□□□□□ -1.91
RNU6-1250P-201ENST00000391218 RGS20O76081 388 aa3.08□□□□□ -1.92
RNU6-1250P-201ENST00000391218 ASTLQ6HA08 431 aaPredicted RBP3.08□□□□□ -1.92
RNU6-1250P-201ENST00000391218 ATMINO43313 823 aaPredicted RBP3.06□□□□□ -1.92
RNU6-1250P-201ENST00000391218 OSCARQ8IYS5 282 aa3.06□□□□□ -1.92
RNU6-1250P-201ENST00000391218 POLA2Q14181 598 aa3.05□□□□□ -1.92
RNU6-1250P-201ENST00000391218 SNPHO15079 494 aa3.01□□□□□ -1.93
RNU6-1250P-201ENST00000391218 CNKSR2Q8WXI2 1034 aa2.98□□□□□ -1.93
RNU6-1250P-201ENST00000391218 KRTAP4-5Q9BYR2 181 aa2.97□□□□□ -1.93
RNU6-1250P-201ENST00000391218 ATF5Q9Y2D1 282 aaPredicted RBP2.97□□□□□ -1.93
RNU6-1250P-201ENST00000391218 PTGER2P43116 358 aa2.96□□□□□ -1.94
RNU6-1250P-201ENST00000391218 SPDYE1Q8NFV5 336 aaPredicted RBP2.95□□□□□ -1.94
RNU6-1250P-201ENST00000391218 FARP1Q9Y4F1 1045 aaPredicted RBP2.95□□□□□ -1.94
RNU6-1250P-201ENST00000391218 PHF12Q96QT6 1004 aa2.94□□□□□ -1.94
RNU6-1250P-201ENST00000391218 TREML4Q6UXN2 200 aa2.93□□□□□ -1.94
RNU6-1250P-201ENST00000391218 HCSTQ9UBK5 93 aa2.92□□□□□ -1.94
RNU6-1250P-201ENST00000391218 ATN1P54259 1190 aaPredicted RBP2.91□□□□□ -1.94
RNU6-1250P-201ENST00000391218 LCE2AQ5TA79 106 aaPredicted RBP2.91□□□□□ -1.94
RNU6-1250P-201ENST00000391218 KRTAP4-11Q9BYQ6 195 aa2.9□□□□□ -1.95
RNU6-1250P-201ENST00000391218 COLQQ9Y215 455 aaPredicted RBP2.9□□□□□ -1.95
RNU6-1250P-201ENST00000391218 SEC24BO95487 1268 aa2.87□□□□□ -1.95
RNU6-1250P-201ENST00000391218 INSM1Q01101 510 aaPredicted RBP2.87□□□□□ -1.95
RNU6-1250P-201ENST00000391218 LAMC2Q13753 1193 aa2.87□□□□□ -1.95
RNU6-1250P-201ENST00000391218 LORP23490 312 aaPredicted RBP2.86□□□□□ -1.95
RNU6-1250P-201ENST00000391218 LAPTM4AQ15012 233 aa2.84□□□□□ -1.95
RNU6-1250P-201ENST00000391218 KRTAP19-1Q8IUB9 90 aa2.83□□□□□ -1.96
RNU6-1250P-201ENST00000391218 KCTD17Q8N5Z5 321 aa2.83□□□□□ -1.96
RNU6-1250P-201ENST00000391218 A0A0G2JS52 829 aa2.82□□□□□ -1.96
RNU6-1250P-201ENST00000391218 MS4A3Q96HJ5 214 aa2.82□□□□□ -1.96
RNU6-1250P-201ENST00000391218 GFRA3O60609 400 aa2.81□□□□□ -1.96
RNU6-1250P-201ENST00000391218 ANKRD13DQ6ZTN6 518 aa2.8□□□□□ -1.96
RNU6-1250P-201ENST00000391218 PRR29P0C7W0 189 aa2.78□□□□□ -1.96
RNU6-1250P-201ENST00000391218 ERBB3P21860 1342 aa2.77□□□□□ -1.97
RNU6-1250P-201ENST00000391218 ZBTB12Q9Y330 459 aaPredicted RBP2.76□□□□□ -1.97
RNU6-1250P-201ENST00000391218 FAM181BA6NEQ2 426 aa2.73□□□□□ -1.97
RNU6-1250P-201ENST00000391218 WIPF1O43516 503 aa2.73□□□□□ -1.97
RNU6-1250P-201ENST00000391218 WFS1O76024 890 aa2.72□□□□□ -1.97
RNU6-1250P-201ENST00000391218 POTECB2RU33 542 aa2.69□□□□□ -1.98
RNU6-1250P-201ENST00000391218 COBLO75128 1261 aa2.69□□□□□ -1.98
RNU6-1250P-201ENST00000391218 VARS2Q5ST30 1063 aaKnown RBP2.69□□□□□ -1.98
RNU6-1250P-201ENST00000391218 PPP4R3CPQ6ZMV5 832 aa2.69□□□□□ -1.98
RNU6-1250P-201ENST00000391218 ARID1BQ8NFD5 2236 aaPredicted RBP2.68□□□□□ -1.98
RNU6-1250P-201ENST00000391218 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP2.68□□□□□ -1.98
RNU6-1250P-201ENST00000391218 PAK3O75914 559 aaPredicted RBP2.68□□□□□ -1.98
RNU6-1250P-201ENST00000391218 HNRNPUL2Q1KMD3 747 aaKnown RBP2.68□□□□□ -1.98
RNU6-1250P-201ENST00000391218 GOLGA2P5Q9HBQ8 144 aa2.67□□□□□ -1.98
RNU6-1250P-201ENST00000391218 KRTAP1-1Q07627 177 aa2.66□□□□□ -1.98
RNU6-1250P-201ENST00000391218 IFFO2Q5TF58 517 aa2.66□□□□□ -1.98
RNU6-1250P-201ENST00000391218 Q8N3U1 123 aa2.66□□□□□ -1.98
RNU6-1250P-201ENST00000391218 BMP2KQ9NSY1 1161 aaPredicted RBP2.66□□□□□ -1.98
RNU6-1250P-201ENST00000391218 EIF2AK3Q9NZJ5 1116 aaKnown RBP2.66□□□□□ -1.98
RNU6-1250P-201ENST00000391218 NRG2O14511 850 aaPredicted RBP2.63□□□□□ -1.99
RNU6-1250P-201ENST00000391218 ZNF687Q8N1G0 1237 aa2.63□□□□□ -1.99
RNU6-1250P-201ENST00000391218 SAMD1Q6SPF0 538 aaPredicted RBP2.62□□□□□ -1.99
RNU6-1250P-201ENST00000391218 SPDYE2BA6NHP3 402 aa2.57□□□□□ -2
RNU6-1250P-201ENST00000391218 SPDYE6P0CI01 402 aa2.57□□□□□ -2
RNU6-1250P-201ENST00000391218 LSM11P83369 360 aaKnown RBP eCLIP2.57□□□□□ -2
RNU6-1250P-201ENST00000391218 SPDYE2Q495Y8 402 aa2.57□□□□□ -2
RNU6-1250P-201ENST00000391218 TRPC6Q9Y210 931 aa2.57□□□□□ -2
RNU6-1250P-201ENST00000391218 HOXB1P14653 301 aaPredicted RBP2.55□□□□□ -2
RNU6-1250P-201ENST00000391218 NFX1Q12986 1120 aaKnown RBP2.55□□□□□ -2
RNU6-1250P-201ENST00000391218 IER5LQ5T953 404 aa2.53□□□□□ -2
RNU6-1250P-201ENST00000391218 ADAM23O75077 832 aa2.52□□□□□ -2.01
RNU6-1250P-201ENST00000391218 PLCG2P16885 1265 aa2.52□□□□□ -2.01
RNU6-1250P-201ENST00000391218 GPAT2Q6NUI2 795 aa2.52□□□□□ -2.01
RNU6-1250P-201ENST00000391218 TMEM151AQ8N4L1 468 aa2.52□□□□□ -2.01
RNU6-1250P-201ENST00000391218 LCE2CQ5TA81 110 aa2.51□□□□□ -2.01
RNU6-1250P-201ENST00000391218 GSK3AP49840 483 aa2.5□□□□□ -2.01
RNU6-1250P-201ENST00000391218 ZSCAN1Q8NBB4 408 aa2.5□□□□□ -2.01
RNU6-1250P-201ENST00000391218 KCTD12Q96CX2 325 aaKnown RBP2.5□□□□□ -2.01
RNU6-1250P-201ENST00000391218 RGS19P49795 217 aa2.49□□□□□ -2.01
RNU6-1250P-201ENST00000391218 KCNMA1Q12791 1236 aa2.49□□□□□ -2.01
RNU6-1250P-201ENST00000391218 GDF11O95390 407 aa2.48□□□□□ -2.01
RNU6-1250P-201ENST00000391218 ZNF710Q8N1W2 664 aa2.48□□□□□ -2.01
RNU6-1250P-201ENST00000391218 TIE1P35590 1138 aa2.47□□□□□ -2.01
RNU6-1250P-201ENST00000391218 TRIM35Q9UPQ4 493 aa2.47□□□□□ -2.01
RNU6-1250P-201ENST00000391218 TTLL13PA6NNM8 815 aa2.46□□□□□ -2.02
RNU6-1250P-201ENST00000391218 PTPN5P54829 565 aa2.46□□□□□ -2.02
RNU6-1250P-201ENST00000391218 HOXB3P14651 431 aaPredicted RBP2.44□□□□□ -2.02
RNU6-1250P-201ENST00000391218 C3orf67Q6ZVT6 689 aa2.42□□□□□ -2.02
RNU6-1250P-201ENST00000391218 RASSF7Q02833 373 aa2.41□□□□□ -2.02
RNU6-1250P-201ENST00000391218 IGHA1P01876 353 aa2.4□□□□□ -2.03
RNU6-1250P-201ENST00000391218 SLC4A2P04920 1241 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms