RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 ABCC10Q5T3U5 1492 aa17.43■□□□□ 0.38
IFT88-203ENST00000389373 ILDR1Q86SU0 546 aaPredicted RBP17.4■□□□□ 0.38
IFT88-203ENST00000389373 ERICH3Q5RHP9 1530 aa17.39■□□□□ 0.37
IFT88-203ENST00000389373 TOP2BQ02880 1626 aa17.36■□□□□ 0.37
IFT88-203ENST00000389373 KDM6BO15054 1643 aa17.34■□□□□ 0.37
IFT88-203ENST00000389373 TTBK1Q5TCY1 1321 aaPredicted RBP17.34■□□□□ 0.37
IFT88-203ENST00000389373 BIVM-ERCC5R4GMW8 1640 aa17.33■□□□□ 0.37
IFT88-203ENST00000389373 DIP2BQ9P265 1576 aa17.32■□□□□ 0.36
IFT88-203ENST00000389373 MAPKBP1O60336 1514 aa17.32■□□□□ 0.36
IFT88-203ENST00000389373 ADCY10Q96PN6 1610 aa17.29■□□□□ 0.36
IFT88-203ENST00000389373 TSPOAP1O95153 1857 aa17.29■□□□□ 0.36
IFT88-203ENST00000389373 RUSC2Q8N2Y8 1516 aa17.27■□□□□ 0.36
IFT88-203ENST00000389373 KIAA0586Q9BVV6 1533 aa17.2■□□□□ 0.34
IFT88-203ENST00000389373 PTPRGP23470 1445 aa17.2■□□□□ 0.34
IFT88-203ENST00000389373 IGF1RP08069 1367 aa17.15■□□□□ 0.34
IFT88-203ENST00000389373 ADGRL1O94910 1474 aa17.14■□□□□ 0.33
IFT88-203ENST00000389373 ASXL2Q76L83 1435 aa17.12■□□□□ 0.33
IFT88-203ENST00000389373 TNIKQ9UKE5 1360 aa17.11■□□□□ 0.33
IFT88-203ENST00000389373 CARMIL2Q6F5E8 1435 aa17.09■□□□□ 0.33
IFT88-203ENST00000389373 PLB1Q6P1J6 1458 aa17.09■□□□□ 0.33
IFT88-203ENST00000389373 ABCC2Q92887 1545 aa17.09■□□□□ 0.33
IFT88-203ENST00000389373 KIF27Q86VH2 1401 aa17.08■□□□□ 0.32
IFT88-203ENST00000389373 CARMIL1Q5VZK9 1371 aa17.04■□□□□ 0.32
IFT88-203ENST00000389373 COL17A1Q9UMD9 1497 aaPredicted RBP17.04■□□□□ 0.32
IFT88-203ENST00000389373 PPRC1Q5VV67 1664 aaKnown RBP17.04■□□□□ 0.32
IFT88-203ENST00000389373 GLI2P10070 1586 aa17.03■□□□□ 0.32
IFT88-203ENST00000389373 HECW2Q9P2P5 1572 aa17.03■□□□□ 0.32
IFT88-203ENST00000389373 CUL7Q14999 1698 aa17.03■□□□□ 0.32
IFT88-203ENST00000389373 UACAQ9BZF9 1416 aa17.02■□□□□ 0.31
IFT88-203ENST00000389373 EPRSP07814 1512 aaKnown RBP16.98■□□□□ 0.31
IFT88-203ENST00000389373 UHRF1BP1LA0JNW5 1464 aa16.98■□□□□ 0.31
IFT88-203ENST00000389373 TEX14Q8IWB6 1497 aa16.97■□□□□ 0.31
IFT88-203ENST00000389373 IQGAP2Q13576 1575 aa16.95■□□□□ 0.3
IFT88-203ENST00000389373 MAP3K4Q9Y6R4 1608 aa16.92■□□□□ 0.3
IFT88-203ENST00000389373 KCNH8Q96L42 1107 aa16.92■□□□□ 0.3
IFT88-203ENST00000389373 DISP1Q96F81 1524 aa16.91■□□□□ 0.3
IFT88-203ENST00000389373 KDM5BQ9UGL1 1544 aa16.91■□□□□ 0.3
IFT88-203ENST00000389373 ZCCHC11Q5TAX3 1644 aaKnown RBP16.88■□□□□ 0.29
IFT88-203ENST00000389373 FBXO41Q8TF61 875 aa16.88■□□□□ 0.29
IFT88-203ENST00000389373 CD109Q6YHK3 1445 aa16.85■□□□□ 0.29
IFT88-203ENST00000389373 WDR7Q9Y4E6 1490 aa16.85■□□□□ 0.29
IFT88-203ENST00000389373 UGGT2Q9NYU1 1516 aa16.81■□□□□ 0.28
IFT88-203ENST00000389373 RAPGEF2Q9Y4G8 1499 aa16.8■□□□□ 0.28
IFT88-203ENST00000389373 KIAA0556O60303 1618 aa16.79■□□□□ 0.28
IFT88-203ENST00000389373 MAGI3Q5TCQ9 1506 aa16.77■□□□□ 0.28
IFT88-203ENST00000389373 ARID3CA6NKF2 412 aa16.77■□□□□ 0.28
IFT88-203ENST00000389373 KIF21BO75037 1637 aa16.75■□□□□ 0.27
IFT88-203ENST00000389373 CFAP43Q8NDM7 1665 aa16.72■□□□□ 0.27
IFT88-203ENST00000389373 ARID4BQ4LE39 1312 aaPredicted RBP16.7■□□□□ 0.26
IFT88-203ENST00000389373 FAM9AQ8IZU1 332 aaPredicted RBP16.69■□□□□ 0.26
IFT88-203ENST00000389373 PTPRMP28827 1452 aa16.68■□□□□ 0.26
IFT88-203ENST00000389373 RAPGEF3O95398 923 aa16.68■□□□□ 0.26
IFT88-203ENST00000389373 P3H3Q8IVL6 736 aa16.68■□□□□ 0.26
IFT88-203ENST00000389373 GOLGA3Q08378 1498 aa16.67■□□□□ 0.26
IFT88-203ENST00000389373 PLPPR3Q6T4P5 718 aa16.67■□□□□ 0.26
IFT88-203ENST00000389373 ABCA8O94911 1581 aa16.67■□□□□ 0.26
IFT88-203ENST00000389373 ARAP3Q8WWN8 1544 aa16.65■□□□□ 0.26
IFT88-203ENST00000389373 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.63■□□□□ 0.25
IFT88-203ENST00000389373 HNRNPUL2Q1KMD3 747 aaKnown RBP16.63■□□□□ 0.25
IFT88-203ENST00000389373 ADAMTSL3P82987 1691 aa16.6■□□□□ 0.25
IFT88-203ENST00000389373 CTTNBP2Q8WZ74 1663 aa16.6■□□□□ 0.25
IFT88-203ENST00000389373 ATP10BO94823 1461 aa16.6■□□□□ 0.25
IFT88-203ENST00000389373 HSPA2P54652 639 aa16.59■□□□□ 0.25
IFT88-203ENST00000389373 PHLDB1Q86UU1 1377 aa16.59■□□□□ 0.25
IFT88-203ENST00000389373 PCF11O94913 1555 aaKnown RBP16.56■□□□□ 0.24
IFT88-203ENST00000389373 LMTK3Q96Q04 1460 aa16.55■□□□□ 0.24
IFT88-203ENST00000389373 MADDQ8WXG6 1647 aa16.54■□□□□ 0.24
IFT88-203ENST00000389373 BCORL1Q5H9F3 1711 aa16.53■□□□□ 0.24
IFT88-203ENST00000389373 CERKQ8TCT0 537 aa16.52■□□□□ 0.24
IFT88-203ENST00000389373 NEO1Q92859 1461 aa16.52■□□□□ 0.23
IFT88-203ENST00000389373 ABCA9Q8IUA7 1624 aa16.52■□□□□ 0.23
IFT88-203ENST00000389373 RANGAP1P46060 587 aaPredicted RBP16.51■□□□□ 0.23
IFT88-203ENST00000389373 MLECQ14165 292 aa16.5■□□□□ 0.23
IFT88-203ENST00000389373 RIMS1Q86UR5 1692 aaKnown RBP16.49■□□□□ 0.23
IFT88-203ENST00000389373 CHIC1Q5VXU3 224 aa16.48■□□□□ 0.23
IFT88-203ENST00000389373 PRXQ9BXM0 1461 aa16.47■□□□□ 0.23
IFT88-203ENST00000389373 FRMPD1Q5SYB0 1578 aa16.47■□□□□ 0.23
IFT88-203ENST00000389373 DENND4BO75064 1496 aaPredicted RBP16.46■□□□□ 0.23
IFT88-203ENST00000389373 PLEKHD1A6NEE1 506 aa16.45■□□□□ 0.22
IFT88-203ENST00000389373 DISP3Q9P2K9 1392 aa16.44■□□□□ 0.22
IFT88-203ENST00000389373 POGZQ7Z3K3 1410 aa16.44■□□□□ 0.22
IFT88-203ENST00000389373 ILDR2Q71H61 639 aa16.43■□□□□ 0.22
IFT88-203ENST00000389373 AKNAQ7Z591 1439 aa16.43■□□□□ 0.22
IFT88-203ENST00000389373 RAPGEF6Q8TEU7 1601 aa16.42■□□□□ 0.22
IFT88-203ENST00000389373 ARHGEF40Q8TER5 1519 aa16.4■□□□□ 0.22
IFT88-203ENST00000389373 FANCAO15360 1455 aa16.4■□□□□ 0.22
IFT88-203ENST00000389373 YEATS2Q9ULM3 1422 aa16.38■□□□□ 0.21
IFT88-203ENST00000389373 FHOD3Q2V2M9 1422 aa16.37■□□□□ 0.21
IFT88-203ENST00000389373 SOCS7O14512 581 aa16.37■□□□□ 0.21
IFT88-203ENST00000389373 NUP153P49790 1475 aaKnown RBP16.36■□□□□ 0.21
IFT88-203ENST00000389373 CEBPAP49715 358 aaPredicted RBP16.36■□□□□ 0.21
IFT88-203ENST00000389373 CSRNP3Q8WYN3 585 aa16.35■□□□□ 0.21
IFT88-203ENST00000389373 RICTORQ6R327 1708 aa16.35■□□□□ 0.21
IFT88-203ENST00000389373 ZFYVE16Q7Z3T8 1539 aa16.35■□□□□ 0.21
IFT88-203ENST00000389373 SAMD9Q5K651 1589 aa16.34■□□□□ 0.21
IFT88-203ENST00000389373 EFCAB5A4FU69 1503 aa16.32■□□□□ 0.2
IFT88-203ENST00000389373 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.31■□□□□ 0.2
IFT88-203ENST00000389373 DMRT2Q9Y5R5 561 aa16.31■□□□□ 0.2
IFT88-203ENST00000389373 CFAP74Q9C0B2 1584 aa16.3■□□□□ 0.2
IFT88-203ENST00000389373 SCAPERQ9BY12 1400 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms