RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 CLEC11AQ9Y240 323 aa9.9□□□□□ -0.82
ERCC4-202ENST00000389138 PITPNM1O00562 1244 aa9.89□□□□□ -0.83
ERCC4-202ENST00000389138 C14orf37Q86TY3 774 aa9.88□□□□□ -0.83
ERCC4-202ENST00000389138 VASPP50552 380 aaPredicted RBP9.88□□□□□ -0.83
ERCC4-202ENST00000389138 PRR29P0C7W0 189 aa9.86□□□□□ -0.83
ERCC4-202ENST00000389138 CC2D2AQ9P2K1 1620 aa9.85□□□□□ -0.83
ERCC4-202ENST00000389138 CECR2Q9BXF3 1484 aa9.83□□□□□ -0.84
ERCC4-202ENST00000389138 PLEKHG5O94827 1062 aa9.83□□□□□ -0.84
ERCC4-202ENST00000389138 NPM2Q86SE8 214 aaKnown RBP9.82□□□□□ -0.84
ERCC4-202ENST00000389138 DCAF8L2P0C7V8 631 aa9.8□□□□□ -0.84
ERCC4-202ENST00000389138 MIER1Q8N108 512 aa9.8□□□□□ -0.84
ERCC4-202ENST00000389138 PLCD3Q8N3E9 789 aa9.8□□□□□ -0.84
ERCC4-202ENST00000389138 CHRDL2Q6WN34 429 aa9.77□□□□□ -0.84
ERCC4-202ENST00000389138 ZBTB47Q9UFB7 747 aaPredicted RBP9.77□□□□□ -0.85
ERCC4-202ENST00000389138 TRIM26Q12899 539 aaPredicted RBP9.76□□□□□ -0.85
ERCC4-202ENST00000389138 SHROOM4Q9ULL8 1493 aa9.75□□□□□ -0.85
ERCC4-202ENST00000389138 SUPT5HO00267 1087 aaKnown RBP9.75□□□□□ -0.85
ERCC4-202ENST00000389138 MYT1Q01538 1121 aa9.74□□□□□ -0.85
ERCC4-202ENST00000389138 MYO15BQ96JP2 1530 aa9.73□□□□□ -0.85
ERCC4-202ENST00000389138 FXR2P51116 673 aaKnown RBP eCLIP9.73□□□□□ -0.85
ERCC4-202ENST00000389138 CREBZFQ9NS37 354 aa9.73□□□□□ -0.85
ERCC4-202ENST00000389138 EIF4G1Q04637 1599 aaKnown RBP9.71□□□□□ -0.85
ERCC4-202ENST00000389138 IFNLR1Q8IU57 520 aaPredicted RBP9.71□□□□□ -0.85
ERCC4-202ENST00000389138 UBTFP17480 764 aaKnown RBP9.68□□□□□ -0.86
ERCC4-202ENST00000389138 HRCP23327 699 aa9.67□□□□□ -0.86
ERCC4-202ENST00000389138 PIP4P2Q8N4L2 257 aa9.66□□□□□ -0.86
ERCC4-202ENST00000389138 SPOCK2Q92563 424 aa9.66□□□□□ -0.86
ERCC4-202ENST00000389138 PRKAR2AP13861 404 aaKnown RBP9.65□□□□□ -0.86
ERCC4-202ENST00000389138 NPM1P06748 294 aaKnown RBP eCLIP9.64□□□□□ -0.87
ERCC4-202ENST00000389138 PAXIP1Q6ZW49 1069 aaPredicted RBP9.62□□□□□ -0.87
ERCC4-202ENST00000389138 CHADLQ6NUI6 762 aa9.61□□□□□ -0.87
ERCC4-202ENST00000389138 MNX1P50219 401 aaPredicted RBP9.61□□□□□ -0.87
ERCC4-202ENST00000389138 TSHZ2Q9NRE2 1034 aa9.6□□□□□ -0.87
ERCC4-202ENST00000389138 FARP1Q9Y4F1 1045 aaPredicted RBP9.59□□□□□ -0.87
ERCC4-202ENST00000389138 PKD2Q13563 968 aa9.59□□□□□ -0.87
ERCC4-202ENST00000389138 CFAP44Q96MT7 982 aa9.59□□□□□ -0.87
ERCC4-202ENST00000389138 CUX2O14529 1486 aa9.58□□□□□ -0.88
ERCC4-202ENST00000389138 NBR1Q14596 966 aa9.55□□□□□ -0.88
ERCC4-202ENST00000389138 BBXQ8WY36 941 aaPredicted RBP9.54□□□□□ -0.88
ERCC4-202ENST00000389138 NUBP1P53384 320 aa9.53□□□□□ -0.88
ERCC4-202ENST00000389138 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.53□□□□□ -0.88
ERCC4-202ENST00000389138 SCRIBQ14160 1630 aa9.53□□□□□ -0.88
ERCC4-202ENST00000389138 EIF5BO60841 1220 aaKnown RBP9.52□□□□□ -0.89
ERCC4-202ENST00000389138 GSE1Q14687 1217 aa9.52□□□□□ -0.89
ERCC4-202ENST00000389138 LOC105371045A0A1W2PR82 267 aa9.5□□□□□ -0.89
ERCC4-202ENST00000389138 FAM212AQ96EL1 285 aa9.5□□□□□ -0.89
ERCC4-202ENST00000389138 TRIM41Q8WV44 630 aa9.47□□□□□ -0.89
ERCC4-202ENST00000389138 DCAF8Q5TAQ9 597 aa9.46□□□□□ -0.89
ERCC4-202ENST00000389138 PAK3O75914 559 aaPredicted RBP9.46□□□□□ -0.9
ERCC4-202ENST00000389138 CIZ1Q9ULV3 898 aaPredicted RBP9.46□□□□□ -0.9
ERCC4-202ENST00000389138 RASEFQ8IZ41 740 aa9.45□□□□□ -0.9
ERCC4-202ENST00000389138 DCAF1Q9Y4B6 1507 aa9.44□□□□□ -0.9
ERCC4-202ENST00000389138 ERCC6Q03468 1493 aa9.4□□□□□ -0.9
ERCC4-202ENST00000389138 ZCCHC6Q5VYS8 1495 aaKnown RBP9.4□□□□□ -0.91
ERCC4-202ENST00000389138 C19orf67A6NJJ6 358 aa9.4□□□□□ -0.91
ERCC4-202ENST00000389138 TSPYL2Q9H2G4 693 aaPredicted RBP9.39□□□□□ -0.91
ERCC4-202ENST00000389138 ECM2O94769 699 aaPredicted RBP9.38□□□□□ -0.91
ERCC4-202ENST00000389138 CD44P16070 742 aaKnown RBP9.38□□□□□ -0.91
ERCC4-202ENST00000389138 CHRM1P11229 460 aaPredicted RBP9.37□□□□□ -0.91
ERCC4-202ENST00000389138 SPRYD3Q8NCJ5 442 aa9.37□□□□□ -0.91
ERCC4-202ENST00000389138 ZRANB1Q9UGI0 708 aa9.35□□□□□ -0.91
ERCC4-202ENST00000389138 SP7Q8TDD2 431 aaPredicted RBP9.34□□□□□ -0.91
ERCC4-202ENST00000389138 CCDC61Q9Y6R9 512 aa9.34□□□□□ -0.91
ERCC4-202ENST00000389138 HAX1O00165 279 aa9.33□□□□□ -0.92
ERCC4-202ENST00000389138 ZNF579Q8NAF0 562 aaKnown RBP9.3□□□□□ -0.92
ERCC4-202ENST00000389138 THOC2Q8NI27 1593 aaKnown RBP9.3□□□□□ -0.92
ERCC4-202ENST00000389138 SGIP1Q9BQI5 828 aa9.29□□□□□ -0.92
ERCC4-202ENST00000389138 PYGBP11216 843 aa9.28□□□□□ -0.92
ERCC4-202ENST00000389138 CLCN6P51797 869 aa9.28□□□□□ -0.92
ERCC4-202ENST00000389138 BRPF1P55201 1214 aaPredicted RBP9.27□□□□□ -0.93
ERCC4-202ENST00000389138 ZNF467Q7Z7K2 595 aaPredicted RBP9.25□□□□□ -0.93
ERCC4-202ENST00000389138 KIF12Q96FN5 646 aa9.25□□□□□ -0.93
ERCC4-202ENST00000389138 RIOK3O14730 519 aaKnown RBP9.24□□□□□ -0.93
ERCC4-202ENST00000389138 RGL2O15211 777 aa9.24□□□□□ -0.93
ERCC4-202ENST00000389138 PHF12Q96QT6 1004 aa9.22□□□□□ -0.93
ERCC4-202ENST00000389138 NESP48681 1621 aa9.21□□□□□ -0.93
ERCC4-202ENST00000389138 VGFO15240 615 aaPredicted RBP9.2□□□□□ -0.94
ERCC4-202ENST00000389138 MAP3K13O43283 966 aa9.2□□□□□ -0.94
ERCC4-202ENST00000389138 PCDHB13Q9Y5F0 798 aa9.2□□□□□ -0.94
ERCC4-202ENST00000389138 NCAPD3P42695 1498 aa9.2□□□□□ -0.94
ERCC4-202ENST00000389138 IGSF3O75054 1194 aa9.2□□□□□ -0.94
ERCC4-202ENST00000389138 RNF25Q96BH1 459 aaPredicted RBP9.19□□□□□ -0.94
ERCC4-202ENST00000389138 CCDC9Q9Y3X0 531 aaKnown RBP9.19□□□□□ -0.94
ERCC4-202ENST00000389138 KIF21AQ7Z4S6 1674 aa9.19□□□□□ -0.94
ERCC4-202ENST00000389138 EVX2Q03828 476 aa9.19□□□□□ -0.94
ERCC4-202ENST00000389138 NECTIN2Q92692 538 aa9.17□□□□□ -0.94
ERCC4-202ENST00000389138 ARID3AQ99856 593 aa9.17□□□□□ -0.94
ERCC4-202ENST00000389138 PDAP1Q13442 181 aaKnown RBP9.16□□□□□ -0.94
ERCC4-202ENST00000389138 C1orf115Q9H7X2 142 aa9.16□□□□□ -0.94
ERCC4-202ENST00000389138 HMGXB3Q12766 1538 aa9.15□□□□□ -0.94
ERCC4-202ENST00000389138 SMARCA2P51531 1590 aa9.15□□□□□ -0.94
ERCC4-202ENST00000389138 IFNL1Q8IU54 200 aa9.15□□□□□ -0.94
ERCC4-202ENST00000389138 PCDHB8Q9UN66 801 aa9.14□□□□□ -0.95
ERCC4-202ENST00000389138 MS4A3Q96HJ5 214 aa9.13□□□□□ -0.95
ERCC4-202ENST00000389138 BAZ1AQ9NRL2 1556 aaPredicted RBP9.13□□□□□ -0.95
ERCC4-202ENST00000389138 LAMC3Q9Y6N6 1575 aa9.13□□□□□ -0.95
ERCC4-202ENST00000389138 PSEN1P49768 467 aa9.11□□□□□ -0.95
ERCC4-202ENST00000389138 ATAD2BQ9ULI0 1458 aa9.11□□□□□ -0.95
ERCC4-202ENST00000389138 HS6ST3Q8IZP7 471 aa9.11□□□□□ -0.95
ERCC4-202ENST00000389138 ZMYND15Q9H091 742 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms