RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 NPM1P06748 294 aaKnown RBP eCLIP38.26■■■■□ 3.72
CNEP1R1-201ENST00000389134 ABCC10Q5T3U5 1492 aa38.25■■■■□ 3.71
CNEP1R1-201ENST00000389134 RUSC2Q8N2Y8 1516 aa38.25■■■■□ 3.71
CNEP1R1-201ENST00000389134 FAM69CQ0P6D2 419 aa38.24■■■■□ 3.71
CNEP1R1-201ENST00000389134 MAPKBP1O60336 1514 aa38.2■■■■□ 3.71
CNEP1R1-201ENST00000389134 DIP2BQ9P265 1576 aa38.12■■■■□ 3.69
CNEP1R1-201ENST00000389134 ADCY10Q96PN6 1610 aa38.12■■■■□ 3.69
CNEP1R1-201ENST00000389134 KIAA0586Q9BVV6 1533 aa38.02■■■■□ 3.68
CNEP1R1-201ENST00000389134 TSPOAP1O95153 1857 aa37.98■■■■□ 3.67
CNEP1R1-201ENST00000389134 KDM6BO15054 1643 aa37.98■■■■□ 3.67
CNEP1R1-201ENST00000389134 IGF1RP08069 1367 aa37.92■■■■□ 3.66
CNEP1R1-201ENST00000389134 CUL7Q14999 1698 aa37.92■■■■□ 3.66
CNEP1R1-201ENST00000389134 KIF27Q86VH2 1401 aa37.87■■■■□ 3.65
CNEP1R1-201ENST00000389134 KDM4FA0A1W2PPD8 638 aa37.85■■■■□ 3.65
CNEP1R1-201ENST00000389134 PTPRGP23470 1445 aa37.79■■■■□ 3.64
CNEP1R1-201ENST00000389134 CARMIL2Q6F5E8 1435 aa37.69■■■■□ 3.62
CNEP1R1-201ENST00000389134 TNIKQ9UKE5 1360 aa37.68■■■■□ 3.62
CNEP1R1-201ENST00000389134 ABCC2Q92887 1545 aa37.67■■■■□ 3.62
CNEP1R1-201ENST00000389134 CARMIL1Q5VZK9 1371 aa37.67■■■■□ 3.62
CNEP1R1-201ENST00000389134 TTBK1Q5TCY1 1321 aaPredicted RBP37.64■■■■□ 3.62
CNEP1R1-201ENST00000389134 PLB1Q6P1J6 1458 aa37.61■■■■□ 3.61
CNEP1R1-201ENST00000389134 GLI2P10070 1586 aa37.6■■■■□ 3.61
CNEP1R1-201ENST00000389134 ASXL2Q76L83 1435 aa37.6■■■■□ 3.61
CNEP1R1-201ENST00000389134 PPRC1Q5VV67 1664 aaKnown RBP37.58■■■■□ 3.61
CNEP1R1-201ENST00000389134 IQGAP2Q13576 1575 aa37.56■■■■□ 3.6
CNEP1R1-201ENST00000389134 UHRF1BP1LA0JNW5 1464 aa37.54■■■■□ 3.6
CNEP1R1-201ENST00000389134 UACAQ9BZF9 1416 aa37.49■■■■□ 3.59
CNEP1R1-201ENST00000389134 DISP1Q96F81 1524 aa37.41■■■■□ 3.58
CNEP1R1-201ENST00000389134 ADGRL1O94910 1474 aa37.39■■■■□ 3.58
CNEP1R1-201ENST00000389134 KDM5BQ9UGL1 1544 aa37.37■■■■□ 3.57
CNEP1R1-201ENST00000389134 MAP3K4Q9Y6R4 1608 aa37.37■■■■□ 3.57
CNEP1R1-201ENST00000389134 EPRSP07814 1512 aaKnown RBP37.36■■■■□ 3.57
CNEP1R1-201ENST00000389134 ILDR1Q86SU0 546 aaPredicted RBP37.34■■■■□ 3.57
CNEP1R1-201ENST00000389134 TEX14Q8IWB6 1497 aa37.33■■■■□ 3.57
CNEP1R1-201ENST00000389134 COL17A1Q9UMD9 1497 aaPredicted RBP37.33■■■■□ 3.57
CNEP1R1-201ENST00000389134 ZCCHC11Q5TAX3 1644 aaKnown RBP37.3■■■■□ 3.56
CNEP1R1-201ENST00000389134 UGGT2Q9NYU1 1516 aa37.3■■■■□ 3.56
CNEP1R1-201ENST00000389134 RAPGEF2Q9Y4G8 1499 aa37.25■■■■□ 3.55
CNEP1R1-201ENST00000389134 KIAA0556O60303 1618 aa37.21■■■■□ 3.55
CNEP1R1-201ENST00000389134 WDR7Q9Y4E6 1490 aa37.13■■■■□ 3.54
CNEP1R1-201ENST00000389134 HECW2Q9P2P5 1572 aa37.09■■■■□ 3.53
CNEP1R1-201ENST00000389134 CFAP43Q8NDM7 1665 aa37.02■■■■□ 3.52
CNEP1R1-201ENST00000389134 CTTNBP2Q8WZ74 1663 aa37.02■■■■□ 3.52
CNEP1R1-201ENST00000389134 MAGI3Q5TCQ9 1506 aa37■■■■□ 3.51
CNEP1R1-201ENST00000389134 CD109Q6YHK3 1445 aa36.99■■■■□ 3.51
CNEP1R1-201ENST00000389134 GOLGA3Q08378 1498 aa36.97■■■■□ 3.51
CNEP1R1-201ENST00000389134 KCNH8Q96L42 1107 aa36.93■■■■□ 3.5
CNEP1R1-201ENST00000389134 ABCA8O94911 1581 aa36.92■■■■□ 3.5
CNEP1R1-201ENST00000389134 KIF21BO75037 1637 aa36.77■■■■□ 3.48
CNEP1R1-201ENST00000389134 ARAP3Q8WWN8 1544 aa36.74■■■■□ 3.47
CNEP1R1-201ENST00000389134 FAM9AQ8IZU1 332 aaPredicted RBP36.73■■■■□ 3.47
CNEP1R1-201ENST00000389134 PRXQ9BXM0 1461 aa36.69■■■■□ 3.46
CNEP1R1-201ENST00000389134 PHLDB1Q86UU1 1377 aa36.64■■■■□ 3.46
CNEP1R1-201ENST00000389134 ATP10BO94823 1461 aa36.61■■■■□ 3.45
CNEP1R1-201ENST00000389134 ABCA9Q8IUA7 1624 aa36.58■■■■□ 3.45
CNEP1R1-201ENST00000389134 ARID3CA6NKF2 412 aa36.57■■■■□ 3.44
CNEP1R1-201ENST00000389134 ADAMTSL3P82987 1691 aa36.54■■■■□ 3.44
CNEP1R1-201ENST00000389134 P3H3Q8IVL6 736 aa36.52■■■■□ 3.44
CNEP1R1-201ENST00000389134 FBXO41Q8TF61 875 aa36.51■■■■□ 3.44
CNEP1R1-201ENST00000389134 PTPRMP28827 1452 aa36.5■■■■□ 3.43
CNEP1R1-201ENST00000389134 NEO1Q92859 1461 aa36.47■■■■□ 3.43
CNEP1R1-201ENST00000389134 RAPGEF3O95398 923 aa36.46■■■■□ 3.43
CNEP1R1-201ENST00000389134 RAPGEF6Q8TEU7 1601 aa36.42■■■■□ 3.42
CNEP1R1-201ENST00000389134 SAMD9Q5K651 1589 aa36.41■■■■□ 3.42
CNEP1R1-201ENST00000389134 BCORL1Q5H9F3 1711 aa36.41■■■■□ 3.42
CNEP1R1-201ENST00000389134 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.36■■■■□ 3.41
CNEP1R1-201ENST00000389134 HNRNPUL2Q1KMD3 747 aaKnown RBP36.36■■■■□ 3.41
CNEP1R1-201ENST00000389134 FRMPD1Q5SYB0 1578 aa36.34■■■■□ 3.41
CNEP1R1-201ENST00000389134 ARID4BQ4LE39 1312 aaPredicted RBP36.34■■■■□ 3.41
CNEP1R1-201ENST00000389134 MADDQ8WXG6 1647 aa36.31■■■■□ 3.4
CNEP1R1-201ENST00000389134 PCF11O94913 1555 aaKnown RBP36.28■■■■□ 3.4
CNEP1R1-201ENST00000389134 CSRNP3Q8WYN3 585 aa36.26■■■■□ 3.4
CNEP1R1-201ENST00000389134 NUP153P49790 1475 aaKnown RBP36.24■■■■□ 3.39
CNEP1R1-201ENST00000389134 LMTK3Q96Q04 1460 aa36.22■■■■□ 3.39
CNEP1R1-201ENST00000389134 RICTORQ6R327 1708 aa36.21■■■■□ 3.39
CNEP1R1-201ENST00000389134 ARHGEF40Q8TER5 1519 aa36.21■■■■□ 3.39
CNEP1R1-201ENST00000389134 RIMS1Q86UR5 1692 aaKnown RBP36.19■■■■□ 3.38
CNEP1R1-201ENST00000389134 DENND4BO75064 1496 aaPredicted RBP36.19■■■■□ 3.38
CNEP1R1-201ENST00000389134 PLEKHD1A6NEE1 506 aa36.18■■■■□ 3.38
CNEP1R1-201ENST00000389134 CFAP74Q9C0B2 1584 aa36.15■■■■□ 3.38
CNEP1R1-201ENST00000389134 AKNAQ7Z591 1439 aa36.15■■■■□ 3.38
CNEP1R1-201ENST00000389134 FHOD3Q2V2M9 1422 aa36.13■■■■□ 3.37
CNEP1R1-201ENST00000389134 FANCAO15360 1455 aa36.1■■■■□ 3.37
CNEP1R1-201ENST00000389134 POGZQ7Z3K3 1410 aa36.08■■■■□ 3.37
CNEP1R1-201ENST00000389134 RANGAP1P46060 587 aaPredicted RBP36.07■■■■□ 3.36
CNEP1R1-201ENST00000389134 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.06■■■■□ 3.36
CNEP1R1-201ENST00000389134 ZMYM4Q5VZL5 1548 aa36.04■■■■□ 3.36
CNEP1R1-201ENST00000389134 EFCAB5A4FU69 1503 aa36.01■■■■□ 3.36
CNEP1R1-201ENST00000389134 EEA1Q15075 1411 aa36■■■■□ 3.35
CNEP1R1-201ENST00000389134 ZFYVE16Q7Z3T8 1539 aa36■■■■□ 3.35
CNEP1R1-201ENST00000389134 MAGI2Q86UL8 1455 aa35.99■■■■□ 3.35
CNEP1R1-201ENST00000389134 TTC37Q6PGP7 1564 aa35.99■■■■□ 3.35
CNEP1R1-201ENST00000389134 HSPA2P54652 639 aa35.98■■■■□ 3.35
CNEP1R1-201ENST00000389134 SIGLEC1Q9BZZ2 1709 aa35.96■■■■□ 3.35
CNEP1R1-201ENST00000389134 PLPPR3Q6T4P5 718 aa35.95■■■■□ 3.35
CNEP1R1-201ENST00000389134 YEATS2Q9ULM3 1422 aa35.94■■■■□ 3.34
CNEP1R1-201ENST00000389134 FER1L4A9Z1Z3 1794 aa35.94■■■■□ 3.34
CNEP1R1-201ENST00000389134 HECW1Q76N89 1606 aa35.9■■■■□ 3.34
CNEP1R1-201ENST00000389134 MLECQ14165 292 aa35.86■■■■□ 3.33
CNEP1R1-201ENST00000389134 SCAPERQ9BY12 1400 aa35.84■■■■□ 3.33
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms