RNA–Protein interactions for RNA: ENST00000380962.9

LCMT1-201, Transcript of leucine carboxyl methyltransferase 1, humanhuman

TSL 2

Gene LCMT1, Length 1,529 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-201ENST00000380962 AQRO60306 1485 aaKnown RBP eCLIP20.06■□□□□ 0.8
LCMT1-201ENST00000380962 TARBP1Q13395 1621 aaKnown RBP20.05■□□□□ 0.8
LCMT1-201ENST00000380962 KANK4Q5T7N3 995 aaPredicted RBP20.03■□□□□ 0.8
LCMT1-201ENST00000380962 MRC2Q9UBG0 1479 aa20.02■□□□□ 0.8
LCMT1-201ENST00000380962 CFAP43Q8NDM7 1665 aa20.01■□□□□ 0.79
LCMT1-201ENST00000380962 FYCO1Q9BQS8 1478 aa20■□□□□ 0.79
LCMT1-201ENST00000380962 HNRNPUL2Q1KMD3 747 aaKnown RBP20■□□□□ 0.79
LCMT1-201ENST00000380962 CLSPNQ9HAW4 1339 aa19.99■□□□□ 0.79
LCMT1-201ENST00000380962 LRRC9Q6ZRR7 1453 aa19.98■□□□□ 0.79
LCMT1-201ENST00000380962 CCNB3Q8WWL7 1395 aa19.97■□□□□ 0.79
LCMT1-201ENST00000380962 CASKIN1Q8WXD9 1431 aa19.97■□□□□ 0.79
LCMT1-201ENST00000380962 TDRD9Q8NDG6 1382 aaKnown RBP19.96■□□□□ 0.79
LCMT1-201ENST00000380962 PCF11O94913 1555 aaKnown RBP19.96■□□□□ 0.79
LCMT1-201ENST00000380962 FMN1Q68DA7 1419 aa19.95■□□□□ 0.78
LCMT1-201ENST00000380962 SAMD9Q5K651 1589 aa19.95■□□□□ 0.78
LCMT1-201ENST00000380962 ERCC6Q03468 1493 aa19.92■□□□□ 0.78
LCMT1-201ENST00000380962 WDR62O43379 1518 aa19.9■□□□□ 0.78
LCMT1-201ENST00000380962 FHOD3Q2V2M9 1422 aa19.9■□□□□ 0.78
LCMT1-201ENST00000380962 PBRM1Q86U86 1689 aa19.89■□□□□ 0.78
LCMT1-201ENST00000380962 IFT140Q96RY7 1462 aa19.89■□□□□ 0.77
LCMT1-201ENST00000380962 THOC2Q8NI27 1593 aaKnown RBP19.88■□□□□ 0.77
LCMT1-201ENST00000380962 ADAMTS12P58397 1594 aa19.86■□□□□ 0.77
LCMT1-201ENST00000380962 GRIN2BQ13224 1484 aa19.85■□□□□ 0.77
LCMT1-201ENST00000380962 SNAPC4Q5SXM2 1469 aa19.85■□□□□ 0.77
LCMT1-201ENST00000380962 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.85■□□□□ 0.77
LCMT1-201ENST00000380962 DHX57Q6P158 1386 aaKnown RBP19.81■□□□□ 0.76
LCMT1-201ENST00000380962 PHLDB1Q86UU1 1377 aa19.78■□□□□ 0.76
LCMT1-201ENST00000380962 P3H3Q8IVL6 736 aa19.76■□□□□ 0.75
LCMT1-201ENST00000380962 IQGAP2Q13576 1575 aa19.76■□□□□ 0.75
LCMT1-201ENST00000380962 ZNF316A6NFI3 1004 aaPredicted RBP19.73■□□□□ 0.75
LCMT1-201ENST00000380962 CCDC18Q5T9S5 1454 aa19.72■□□□□ 0.75
LCMT1-201ENST00000380962 UGGT2Q9NYU1 1516 aa19.71■□□□□ 0.75
LCMT1-201ENST00000380962 EHBP1L1Q8N3D4 1523 aa19.69■□□□□ 0.74
LCMT1-201ENST00000380962 SETD5Q9C0A6 1442 aa19.68■□□□□ 0.74
LCMT1-201ENST00000380962 DIEXFQ68CQ4 756 aaKnown RBP19.67■□□□□ 0.74
LCMT1-201ENST00000380962 HECW1Q76N89 1606 aa19.67■□□□□ 0.74
LCMT1-201ENST00000380962 MTUS2Q5JR59 1369 aa19.66■□□□□ 0.74
LCMT1-201ENST00000380962 ZNF608Q9ULD9 1512 aaPredicted RBP19.66■□□□□ 0.74
LCMT1-201ENST00000380962 KIAA0586Q9BVV6 1533 aa19.65■□□□□ 0.74
LCMT1-201ENST00000380962 RAB3GAP2Q9H2M9 1393 aa19.65■□□□□ 0.74
LCMT1-201ENST00000380962 FGD6Q6ZV73 1430 aa19.64■□□□□ 0.74
LCMT1-201ENST00000380962 EIF4G3O43432 1585 aaKnown RBP19.64■□□□□ 0.73
LCMT1-201ENST00000380962 ATP1B4Q9UN42 357 aaPredicted RBP19.64■□□□□ 0.73
LCMT1-201ENST00000380962 MAGI1Q96QZ7 1491 aaPredicted RBP19.64■□□□□ 0.73
LCMT1-201ENST00000380962 SUPT6HQ7KZ85 1726 aaKnown RBP19.63■□□□□ 0.73
LCMT1-201ENST00000380962 LRRIQ1Q96JM4 1722 aa19.63■□□□□ 0.73
LCMT1-201ENST00000380962 ARHGEF11O15085 1522 aa19.61■□□□□ 0.73
LCMT1-201ENST00000380962 GRIN2AQ12879 1464 aa19.6■□□□□ 0.73
LCMT1-201ENST00000380962 NCOA2Q15596 1464 aa19.59■□□□□ 0.73
LCMT1-201ENST00000380962 MYOM3Q5VTT5 1437 aa19.58■□□□□ 0.73
LCMT1-201ENST00000380962 FAM50AQ14320 339 aaKnown RBP19.57■□□□□ 0.72
LCMT1-201ENST00000380962 KIAA0556O60303 1618 aa19.55■□□□□ 0.72
LCMT1-201ENST00000380962 EPRSP07814 1512 aaKnown RBP19.54■□□□□ 0.72
LCMT1-201ENST00000380962 ITGAEP38570 1179 aa19.54■□□□□ 0.72
LCMT1-201ENST00000380962 MAPKBP1O60336 1514 aa19.54■□□□□ 0.72
LCMT1-201ENST00000380962 SYNJ2O15056 1496 aa19.53■□□□□ 0.72
LCMT1-201ENST00000380962 DISP1Q96F81 1524 aa19.52■□□□□ 0.71
LCMT1-201ENST00000380962 TCOF1Q13428 1488 aaKnown RBP19.51■□□□□ 0.71
LCMT1-201ENST00000380962 HFM1A2PYH4 1435 aa19.49■□□□□ 0.71
LCMT1-201ENST00000380962 TIMELESSQ9UNS1 1208 aa19.49■□□□□ 0.71
LCMT1-201ENST00000380962 MAGI3Q5TCQ9 1506 aa19.49■□□□□ 0.71
LCMT1-201ENST00000380962 MIA2Q96PC5 1412 aa19.49■□□□□ 0.71
LCMT1-201ENST00000380962 PTPN23Q9H3S7 1636 aa19.48■□□□□ 0.71
LCMT1-201ENST00000380962 NUP160Q12769 1436 aa19.46■□□□□ 0.71
LCMT1-201ENST00000380962 AKNAQ7Z591 1439 aa19.46■□□□□ 0.71
LCMT1-201ENST00000380962 RAPGEF6Q8TEU7 1601 aa19.43■□□□□ 0.7
LCMT1-201ENST00000380962 CEP170Q5SW79 1584 aa19.42■□□□□ 0.7
LCMT1-201ENST00000380962 CDK13Q14004 1512 aaKnown RBP19.4■□□□□ 0.7
LCMT1-201ENST00000380962 ACIN1Q9UKV3 1341 aaKnown RBP19.4■□□□□ 0.7
LCMT1-201ENST00000380962 PTPRKQ15262 1439 aa19.39■□□□□ 0.69
LCMT1-201ENST00000380962 UACAQ9BZF9 1416 aa19.39■□□□□ 0.69
LCMT1-201ENST00000380962 CHMP7Q8WUX9 453 aaPredicted RBP19.39■□□□□ 0.69
LCMT1-201ENST00000380962 NUP153P49790 1475 aaKnown RBP19.38■□□□□ 0.69
LCMT1-201ENST00000380962 CARMIL2Q6F5E8 1435 aa19.38■□□□□ 0.69
LCMT1-201ENST00000380962 NAIPQ13075 1403 aa19.37■□□□□ 0.69
LCMT1-201ENST00000380962 CDK11AQ9UQ88 783 aaPredicted RBP19.35■□□□□ 0.69
LCMT1-201ENST00000380962 GCC2Q8IWJ2 1684 aa19.35■□□□□ 0.69
LCMT1-201ENST00000380962 CENPBP07199 599 aaPredicted RBP19.35■□□□□ 0.69
LCMT1-201ENST00000380962 TROQ12816 1431 aaPredicted RBP19.29■□□□□ 0.68
LCMT1-201ENST00000380962 ROCK1Q13464 1354 aa19.29■□□□□ 0.68
LCMT1-201ENST00000380962 ADCY10Q96PN6 1610 aa19.29■□□□□ 0.68
LCMT1-201ENST00000380962 JPH4Q96JJ6 628 aa19.27■□□□□ 0.68
LCMT1-201ENST00000380962 ABCA8O94911 1581 aa19.24■□□□□ 0.67
LCMT1-201ENST00000380962 DNMT1P26358 1616 aaKnown RBP19.24■□□□□ 0.67
LCMT1-201ENST00000380962 ITSN2Q9NZM3 1697 aa19.24■□□□□ 0.67
LCMT1-201ENST00000380962 MIER1Q8N108 512 aa19.22■□□□□ 0.67
LCMT1-201ENST00000380962 DAPK1P53355 1430 aa19.21■□□□□ 0.67
LCMT1-201ENST00000380962 PLB1Q6P1J6 1458 aa19.21■□□□□ 0.67
LCMT1-201ENST00000380962 SIN3AQ96ST3 1273 aa19.2■□□□□ 0.66
LCMT1-201ENST00000380962 FBLN2P98095 1184 aa19.19■□□□□ 0.66
LCMT1-201ENST00000380962 PPP1R15AO75807 674 aaPredicted RBP19.18■□□□□ 0.66
LCMT1-201ENST00000380962 ABCC5O15440 1437 aa19.17■□□□□ 0.66
LCMT1-201ENST00000380962 TONSLQ96HA7 1378 aa19.16■□□□□ 0.66
LCMT1-201ENST00000380962 SCAF1Q9H7N4 1312 aaKnown RBP19.16■□□□□ 0.66
LCMT1-201ENST00000380962 PRG4Q92954 1404 aaPredicted RBP19.15■□□□□ 0.66
LCMT1-201ENST00000380962 NEUROD1Q13562 356 aa19.15■□□□□ 0.66
LCMT1-201ENST00000380962 GPATCH8Q9UKJ3 1502 aaKnown RBP19.14■□□□□ 0.65
LCMT1-201ENST00000380962 CAMSAP2Q08AD1 1489 aa19.12■□□□□ 0.65
LCMT1-201ENST00000380962 KIF14Q15058 1648 aa19.12■□□□□ 0.65
LCMT1-201ENST00000380962 ADGRL2O95490 1459 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms