RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 ADAMTS12P58397 1594 aa33.33■■■□□ 2.93
GMDS-202ENST00000380815 EIF4G3O43432 1585 aaKnown RBP33.3■■■□□ 2.92
GMDS-202ENST00000380815 APLP2Q06481 763 aa33.28■■■□□ 2.92
GMDS-202ENST00000380815 EFCAB5A4FU69 1503 aa33.25■■■□□ 2.91
GMDS-202ENST00000380815 SNAPC4Q5SXM2 1469 aa33.16■■■□□ 2.9
GMDS-202ENST00000380815 TTBK1Q5TCY1 1321 aaPredicted RBP33.16■■■□□ 2.9
GMDS-202ENST00000380815 MAGI1Q96QZ7 1491 aaPredicted RBP33.13■■■□□ 2.89
GMDS-202ENST00000380815 SAMD9Q5K651 1589 aa33.08■■■□□ 2.89
GMDS-202ENST00000380815 FHOD3Q2V2M9 1422 aa33.05■■■□□ 2.88
GMDS-202ENST00000380815 P3H3Q8IVL6 736 aa33.04■■■□□ 2.88
GMDS-202ENST00000380815 HRCP23327 699 aa33.03■■■□□ 2.88
GMDS-202ENST00000380815 GRIN2AQ12879 1464 aa33.03■■■□□ 2.88
GMDS-202ENST00000380815 IQGAP2Q13576 1575 aa33.02■■■□□ 2.88
GMDS-202ENST00000380815 SYNJ2O15056 1496 aa33■■■□□ 2.87
GMDS-202ENST00000380815 MAP3K1Q13233 1512 aa33■■■□□ 2.87
GMDS-202ENST00000380815 FMN1Q68DA7 1419 aa32.96■■■□□ 2.87
GMDS-202ENST00000380815 PCF11O94913 1555 aaKnown RBP32.94■■■□□ 2.86
GMDS-202ENST00000380815 KIAA0586Q9BVV6 1533 aa32.93■■■□□ 2.86
GMDS-202ENST00000380815 KANK4Q5T7N3 995 aaPredicted RBP32.93■■■□□ 2.86
GMDS-202ENST00000380815 FYCO1Q9BQS8 1478 aa32.92■■■□□ 2.86
GMDS-202ENST00000380815 CASKIN1Q8WXD9 1431 aa32.92■■■□□ 2.86
GMDS-202ENST00000380815 TIAM1Q13009 1591 aa32.91■■■□□ 2.86
GMDS-202ENST00000380815 CHMP7Q8WUX9 453 aaPredicted RBP32.91■■■□□ 2.86
GMDS-202ENST00000380815 UGGT2Q9NYU1 1516 aa32.88■■■□□ 2.85
GMDS-202ENST00000380815 CFAP43Q8NDM7 1665 aa32.81■■■□□ 2.84
GMDS-202ENST00000380815 CEP170Q5SW79 1584 aa32.79■■■□□ 2.84
GMDS-202ENST00000380815 NUP160Q12769 1436 aa32.78■■■□□ 2.84
GMDS-202ENST00000380815 LRRC9Q6ZRR7 1453 aa32.77■■■□□ 2.84
GMDS-202ENST00000380815 FBLN2P98095 1184 aa32.76■■■□□ 2.84
GMDS-202ENST00000380815 ATP1B4Q9UN42 357 aaPredicted RBP32.72■■■□□ 2.83
GMDS-202ENST00000380815 DISP1Q96F81 1524 aa32.69■■■□□ 2.82
GMDS-202ENST00000380815 KIAA0556O60303 1618 aa32.68■■■□□ 2.82
GMDS-202ENST00000380815 RRBP1Q9P2E9 1410 aaKnown RBP32.66■■■□□ 2.82
GMDS-202ENST00000380815 LRRIQ1Q96JM4 1722 aa32.57■■■□□ 2.8
GMDS-202ENST00000380815 HECW1Q76N89 1606 aa32.56■■■□□ 2.8
GMDS-202ENST00000380815 ZEB1P37275 1124 aaPredicted RBP32.55■■■□□ 2.8
GMDS-202ENST00000380815 CCDC18Q5T9S5 1454 aa32.55■■■□□ 2.8
GMDS-202ENST00000380815 JPH4Q96JJ6 628 aa32.55■■■□□ 2.8
GMDS-202ENST00000380815 CCNB3Q8WWL7 1395 aa32.52■■■□□ 2.8
GMDS-202ENST00000380815 HNRNPUL2Q1KMD3 747 aaKnown RBP32.52■■■□□ 2.8
GMDS-202ENST00000380815 CHD1O14646 1710 aa32.51■■■□□ 2.8
GMDS-202ENST00000380815 CARMIL2Q6F5E8 1435 aa32.51■■■□□ 2.79
GMDS-202ENST00000380815 PHLDB1Q86UU1 1377 aa32.48■■■□□ 2.79
GMDS-202ENST00000380815 MTUS2Q5JR59 1369 aa32.46■■■□□ 2.79
GMDS-202ENST00000380815 EPRSP07814 1512 aaKnown RBP32.45■■■□□ 2.78
GMDS-202ENST00000380815 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.45■■■□□ 2.78
GMDS-202ENST00000380815 EHBP1L1Q8N3D4 1523 aa32.41■■■□□ 2.78
GMDS-202ENST00000380815 RAPGEF6Q8TEU7 1601 aa32.38■■■□□ 2.77
GMDS-202ENST00000380815 CCER1Q8TC90 406 aaPredicted RBP32.38■■■□□ 2.77
GMDS-202ENST00000380815 NUP153P49790 1475 aaKnown RBP32.34■■■□□ 2.77
GMDS-202ENST00000380815 MAGI3Q5TCQ9 1506 aa32.33■■■□□ 2.77
GMDS-202ENST00000380815 SUPT6HQ7KZ85 1726 aaKnown RBP32.32■■■□□ 2.76
GMDS-202ENST00000380815 CDK13Q14004 1512 aaKnown RBP32.32■■■□□ 2.76
GMDS-202ENST00000380815 PRG4Q92954 1404 aaPredicted RBP32.3■■■□□ 2.76
GMDS-202ENST00000380815 NCOA2Q15596 1464 aa32.3■■■□□ 2.76
GMDS-202ENST00000380815 SHROOM2Q13796 1616 aa32.29■■■□□ 2.76
GMDS-202ENST00000380815 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.28■■■□□ 2.763e-7■■■■□ 25
GMDS-202ENST00000380815 ARHGEF11O15085 1522 aa32.26■■■□□ 2.76
GMDS-202ENST00000380815 PLB1Q6P1J6 1458 aa32.26■■■□□ 2.75
GMDS-202ENST00000380815 FGD6Q6ZV73 1430 aa32.24■■■□□ 2.75
GMDS-202ENST00000380815 MYOM3Q5VTT5 1437 aa32.21■■■□□ 2.75
GMDS-202ENST00000380815 ABCA8O94911 1581 aa32.2■■■□□ 2.74
GMDS-202ENST00000380815 ARID3CA6NKF2 412 aa32.18■■■□□ 2.74
GMDS-202ENST00000380815 FAM50AQ14320 339 aaKnown RBP32.18■■■□□ 2.74
GMDS-202ENST00000380815 CLASP1Q7Z460 1538 aa32.17■■■□□ 2.74
GMDS-202ENST00000380815 CDK11AQ9UQ88 783 aaPredicted RBP32.17■■■□□ 2.74
GMDS-202ENST00000380815 PTPRGP23470 1445 aa32.15■■■□□ 2.74
GMDS-202ENST00000380815 ITGAEP38570 1179 aa32.13■■■□□ 2.73
GMDS-202ENST00000380815 TROQ12816 1431 aaPredicted RBP32.05■■■□□ 2.72
GMDS-202ENST00000380815 MIA2Q96PC5 1412 aa32.03■■■□□ 2.72
GMDS-202ENST00000380815 PTPN23Q9H3S7 1636 aa32.02■■■□□ 2.72
GMDS-202ENST00000380815 ERCC6L2Q5T890 1561 aa32.01■■■□□ 2.71
GMDS-202ENST00000380815 ATP10BO94823 1461 aa32■■■□□ 2.71
GMDS-202ENST00000380815 TCOF1Q13428 1488 aaKnown RBP32■■■□□ 2.71
GMDS-202ENST00000380815 UACAQ9BZF9 1416 aa31.97■■■□□ 2.71
GMDS-202ENST00000380815 SETD5Q9C0A6 1442 aa31.97■■■□□ 2.71
GMDS-202ENST00000380815 ADCY10Q96PN6 1610 aa31.95■■■□□ 2.71
GMDS-202ENST00000380815 DHX57Q6P158 1386 aaKnown RBP31.93■■■□□ 2.7
GMDS-202ENST00000380815 RAB3GAP2Q9H2M9 1393 aa31.93■■■□□ 2.7
GMDS-202ENST00000380815 CLSPNQ9HAW4 1339 aa31.91■■■□□ 2.7
GMDS-202ENST00000380815 PLEKHD1A6NEE1 506 aa31.91■■■□□ 2.7
GMDS-202ENST00000380815 PTPRKQ15262 1439 aa31.87■■■□□ 2.69
GMDS-202ENST00000380815 ABCC2Q92887 1545 aa31.86■■■□□ 2.69
GMDS-202ENST00000380815 KIF14Q15058 1648 aa31.85■■■□□ 2.69
GMDS-202ENST00000380815 ITSN2Q9NZM3 1697 aa31.81■■■□□ 2.68
GMDS-202ENST00000380815 HFM1A2PYH4 1435 aa31.8■■■□□ 2.68
GMDS-202ENST00000380815 GPATCH8Q9UKJ3 1502 aaKnown RBP31.79■■■□□ 2.68
GMDS-202ENST00000380815 UHRF1BP1LA0JNW5 1464 aa31.78■■■□□ 2.68
GMDS-202ENST00000380815 OSCARQ8IYS5 282 aa31.77■■■□□ 2.68
GMDS-202ENST00000380815 ABCC10Q5T3U5 1492 aa31.76■■■□□ 2.67
GMDS-202ENST00000380815 CFDP1Q9UEE9 299 aaPredicted RBP31.72■■■□□ 2.67
GMDS-202ENST00000380815 AKNAQ7Z591 1439 aa31.7■■■□□ 2.67
GMDS-202ENST00000380815 NAIPQ13075 1403 aa31.7■■■□□ 2.66
GMDS-202ENST00000380815 DNMT1P26358 1616 aaKnown RBP31.67■■■□□ 2.66
GMDS-202ENST00000380815 ZNF644Q9H582 1327 aaPredicted RBP31.66■■■□□ 2.66
GMDS-202ENST00000380815 KDM5BQ9UGL1 1544 aa31.66■■■□□ 2.66
GMDS-202ENST00000380815 CAMSAP2Q08AD1 1489 aa31.66■■■□□ 2.66
GMDS-202ENST00000380815 DAPK1P53355 1430 aa31.66■■■□□ 2.66
GMDS-202ENST00000380815 CDC42BPAQ5VT25 1732 aa31.66■■■□□ 2.66
GMDS-202ENST00000380815 ABCC5O15440 1437 aa31.63■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms