RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 NOP58Q9Y2X3 529 aaKnown RBP5.6□□□□□ -1.51
BRCA2-201ENST00000380152 TRIM44Q96DX7 344 aaPredicted RBP5.58□□□□□ -1.52
BRCA2-201ENST00000380152 SIN3AQ96ST3 1273 aa5.58□□□□□ -1.52
BRCA2-201ENST00000380152 DEKP35659 375 aaKnown RBP5.58□□□□□ -1.52
BRCA2-201ENST00000380152 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.58□□□□□ -1.52
BRCA2-201ENST00000380152 TSHZ2Q9NRE2 1034 aa5.57□□□□□ -1.52
BRCA2-201ENST00000380152 WDR43Q15061 677 aaKnown RBP eCLIP5.57□□□□□ -1.52
BRCA2-201ENST00000380152 LAS1LQ9Y4W2 734 aaKnown RBP5.57□□□□□ -1.52
BRCA2-201ENST00000380152 ABCC8Q09428 1581 aa5.56□□□□□ -1.52
BRCA2-201ENST00000380152 MTUS2Q5JR59 1369 aa5.56□□□□□ -1.52
BRCA2-201ENST00000380152 DDRGK1Q96HY6 314 aa5.56□□□□□ -1.52
BRCA2-201ENST00000380152 PPP4R2Q9NY27 417 aa5.56□□□□□ -1.52
BRCA2-201ENST00000380152 RRP7BPQ9NSQ0 103 aa5.55□□□□□ -1.52
BRCA2-201ENST00000380152 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.55□□□□□ -1.52
BRCA2-201ENST00000380152 WIZO95785 1651 aa5.55□□□□□ -1.52
BRCA2-201ENST00000380152 TNIKQ9UKE5 1360 aa5.54□□□□□ -1.52
BRCA2-201ENST00000380152 KCNH8Q96L42 1107 aa5.54□□□□□ -1.52
BRCA2-201ENST00000380152 CEP164Q9UPV0 1460 aa5.53□□□□□ -1.52
BRCA2-201ENST00000380152 BECN1Q14457 450 aa5.53□□□□□ -1.52
BRCA2-201ENST00000380152 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.53□□□□□ -1.52
BRCA2-201ENST00000380152 EEA1Q15075 1411 aa5.52□□□□□ -1.53
BRCA2-201ENST00000380152 SOGA1O94964 1423 aa5.52□□□□□ -1.53
BRCA2-201ENST00000380152 PPM1GO15355 546 aaPredicted RBP5.52□□□□□ -1.53
BRCA2-201ENST00000380152 ERICH6BQ5W0A0 696 aa5.51□□□□□ -1.53
BRCA2-201ENST00000380152 WRNQ14191 1432 aaPredicted RBP eCLIP5.51□□□□□ -1.53
BRCA2-201ENST00000380152 NAP1L5Q96NT1 182 aaPredicted RBP5.51□□□□□ -1.53
BRCA2-201ENST00000380152 CCNB3Q8WWL7 1395 aa5.51□□□□□ -1.53
BRCA2-201ENST00000380152 NACADO15069 1562 aa5.5□□□□□ -1.53
BRCA2-201ENST00000380152 RGS3P49796 1198 aa5.5□□□□□ -1.53
BRCA2-201ENST00000380152 CHGAP10645 457 aaKnown RBP5.5□□□□□ -1.53
BRCA2-201ENST00000380152 CCDC88BA6NC98 1476 aa5.5□□□□□ -1.53
BRCA2-201ENST00000380152 RGL3Q3MIN7 710 aa5.49□□□□□ -1.53
BRCA2-201ENST00000380152 DNTTIP2Q5QJE6 756 aaKnown RBP5.49□□□□□ -1.53
BRCA2-201ENST00000380152 NCLP19338 710 aaKnown RBP5.48□□□□□ -1.53
BRCA2-201ENST00000380152 CARD11Q9BXL7 1154 aa5.48□□□□□ -1.53
BRCA2-201ENST00000380152 CCER2I3L3R5 266 aa5.48□□□□□ -1.53
BRCA2-201ENST00000380152 ARID4BQ4LE39 1312 aaPredicted RBP5.48□□□□□ -1.53
BRCA2-201ENST00000380152 CECR2Q9BXF3 1484 aa5.47□□□□□ -1.53
BRCA2-201ENST00000380152 TSPY4P0CV99 314 aa5.47□□□□□ -1.53
BRCA2-201ENST00000380152 TSPY10P0CW01 314 aa5.47□□□□□ -1.53
BRCA2-201ENST00000380152 CC2D1BQ5T0F9 858 aaKnown RBP5.47□□□□□ -1.53
BRCA2-201ENST00000380152 SPRYD3Q8NCJ5 442 aa5.47□□□□□ -1.53
BRCA2-201ENST00000380152 TPRNQ4KMQ1 711 aa5.47□□□□□ -1.53
BRCA2-201ENST00000380152 NEUROD2Q15784 382 aa5.47□□□□□ -1.53
BRCA2-201ENST00000380152 BAZ1AQ9NRL2 1556 aaPredicted RBP5.46□□□□□ -1.53
BRCA2-201ENST00000380152 KNSTRNQ9Y448 316 aa5.46□□□□□ -1.54
BRCA2-201ENST00000380152 FRAT1Q92837 279 aaPredicted RBP5.46□□□□□ -1.54
BRCA2-201ENST00000380152 IPO9Q96P70 1041 aaKnown RBP5.46□□□□□ -1.54
BRCA2-201ENST00000380152 GOLGA6L22H0YM25 854 aa5.45□□□□□ -1.54
BRCA2-201ENST00000380152 KANK4Q5T7N3 995 aaPredicted RBP5.45□□□□□ -1.54
BRCA2-201ENST00000380152 GZF1Q9H116 711 aaPredicted RBP5.45□□□□□ -1.54
BRCA2-201ENST00000380152 SENP3Q9H4L4 574 aaPredicted RBP5.45□□□□□ -1.54
BRCA2-201ENST00000380152 RAB3GAP2Q9H2M9 1393 aa5.45□□□□□ -1.54
BRCA2-201ENST00000380152 FTSJ3Q8IY81 847 aaKnown RBP5.45□□□□□ -1.54
BRCA2-201ENST00000380152 MROH2BQ7Z745 1585 aa5.45□□□□□ -1.54
BRCA2-201ENST00000380152 VPS8Q8N3P4 1428 aa5.45□□□□□ -1.54
BRCA2-201ENST00000380152 SETD5Q9C0A6 1442 aa5.45□□□□□ -1.54
BRCA2-201ENST00000380152 FOXD1Q16676 465 aa5.44□□□□□ -1.54
BRCA2-201ENST00000380152 MYH16Q9H6N6 1097 aa5.44□□□□□ -1.54
BRCA2-201ENST00000380152 KIF27Q86VH2 1401 aa5.43□□□□□ -1.54
BRCA2-201ENST00000380152 PLCB2Q00722 1185 aa5.43□□□□□ -1.54
BRCA2-201ENST00000380152 TNNT2P45379 298 aaPredicted RBP5.43□□□□□ -1.54
BRCA2-201ENST00000380152 BAZ1BQ9UIG0 1483 aaKnown RBP5.43□□□□□ -1.54
BRCA2-201ENST00000380152 DCAF11Q8TEB1 546 aa5.43□□□□□ -1.54
BRCA2-201ENST00000380152 MSNP26038 577 aaKnown RBP5.42□□□□□ -1.54
BRCA2-201ENST00000380152 HSP90AB1P08238 724 aaKnown RBP5.42□□□□□ -1.54
BRCA2-201ENST00000380152 HSPA5P11021 654 aaKnown RBP5.42□□□□□ -1.54
BRCA2-201ENST00000380152 TIMELESSQ9UNS1 1208 aa5.42□□□□□ -1.54
BRCA2-201ENST00000380152 PTMAP06454 111 aaKnown RBP5.42□□□□□ -1.54
BRCA2-201ENST00000380152 ZBTB7CA1YPR0 619 aa5.42□□□□□ -1.54
BRCA2-201ENST00000380152 STAG3Q9UJ98 1225 aa5.41□□□□□ -1.54
BRCA2-201ENST00000380152 RCAN3Q9UKA8 241 aa5.41□□□□□ -1.54
BRCA2-201ENST00000380152 FHAD1B1AJZ9 1412 aa5.41□□□□□ -1.54
BRCA2-201ENST00000380152 ARHGAP35Q9NRY4 1499 aa5.41□□□□□ -1.54
BRCA2-201ENST00000380152 SLKQ9H2G2 1235 aaPredicted RBP5.41□□□□□ -1.54
BRCA2-201ENST00000380152 AMER1Q5JTC6 1135 aaPredicted RBP5.4□□□□□ -1.54
BRCA2-201ENST00000380152 CFDP1Q9UEE9 299 aaPredicted RBP5.4□□□□□ -1.55
BRCA2-201ENST00000380152 RUSC2Q8N2Y8 1516 aa5.4□□□□□ -1.55
BRCA2-201ENST00000380152 ARID3AQ99856 593 aa5.4□□□□□ -1.55
BRCA2-201ENST00000380152 GSE1Q14687 1217 aa5.39□□□□□ -1.55
BRCA2-201ENST00000380152 EIF4G1Q04637 1599 aaKnown RBP5.39□□□□□ -1.55
BRCA2-201ENST00000380152 CASC1Q6TDU7 716 aa5.39□□□□□ -1.55
BRCA2-201ENST00000380152 TCERG1O14776 1098 aaKnown RBP5.39□□□□□ -1.55
BRCA2-201ENST00000380152 PPP1R15AO75807 674 aaPredicted RBP5.39□□□□□ -1.55
BRCA2-201ENST00000380152 DHX57Q6P158 1386 aaKnown RBP5.39□□□□□ -1.55
BRCA2-201ENST00000380152 L1TD1Q5T7N2 865 aaKnown RBP5.39□□□□□ -1.55
BRCA2-201ENST00000380152 PEG3Q9GZU2 1588 aa5.39□□□□□ -1.55
BRCA2-201ENST00000380152 SLC4A3P48751 1232 aa5.38□□□□□ -1.55
BRCA2-201ENST00000380152 RAPGEF2Q9Y4G8 1499 aa5.38□□□□□ -1.55
BRCA2-201ENST00000380152 NUDCQ9Y266 331 aa5.38□□□□□ -1.55
BRCA2-201ENST00000380152 FANCIQ9NVI1 1328 aa5.38□□□□□ -1.55
BRCA2-201ENST00000380152 BICRAQ9NZM4 1560 aa5.38□□□□□ -1.55
BRCA2-201ENST00000380152 HSCBQ8IWL3 235 aa5.38□□□□□ -1.55
BRCA2-201ENST00000380152 CHMP7Q8WUX9 453 aaPredicted RBP5.37□□□□□ -1.55
BRCA2-201ENST00000380152 USP35Q9P2H5 1018 aa5.37□□□□□ -1.55
BRCA2-201ENST00000380152 CDCA8Q53HL2 280 aa5.37□□□□□ -1.55
BRCA2-201ENST00000380152 PLPPR3Q6T4P5 718 aa5.37□□□□□ -1.55
BRCA2-201ENST00000380152 PNNQ9H307 717 aaKnown RBP5.37□□□□□ -1.55
BRCA2-201ENST00000380152 MPHOSPH9Q99550 1183 aa5.37□□□□□ -1.55
BRCA2-201ENST00000380152 PLIN1O60240 522 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 196.3 ms