RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 RUSC2Q8N2Y8 1516 aa31.59■■■□□ 2.65
PDLIM4-202ENST00000379018 NPM1P06748 294 aaKnown RBP eCLIP31.48■■■□□ 2.63
PDLIM4-202ENST00000379018 FAM69CQ0P6D2 419 aa31.48■■■□□ 2.63
PDLIM4-202ENST00000379018 ADCY10Q96PN6 1610 aa31.41■■■□□ 2.62
PDLIM4-202ENST00000379018 ABCC10Q5T3U5 1492 aa31.4■■■□□ 2.62
PDLIM4-202ENST00000379018 MAPKBP1O60336 1514 aa31.36■■■□□ 2.61
PDLIM4-202ENST00000379018 DIP2BQ9P265 1576 aa31.34■■■□□ 2.61
PDLIM4-202ENST00000379018 KIAA0586Q9BVV6 1533 aa31.34■■■□□ 2.61
PDLIM4-202ENST00000379018 TTBK1Q5TCY1 1321 aaPredicted RBP31.33■■■□□ 2.61
PDLIM4-202ENST00000379018 KIF27Q86VH2 1401 aa31.32■■■□□ 2.61
PDLIM4-202ENST00000379018 IGF1RP08069 1367 aa31.32■■■□□ 2.6
PDLIM4-202ENST00000379018 CUL7Q14999 1698 aa31.31■■■□□ 2.6
PDLIM4-202ENST00000379018 TSPOAP1O95153 1857 aa31.28■■■□□ 2.6
PDLIM4-202ENST00000379018 KDM6BO15054 1643 aa31.21■■■□□ 2.59
PDLIM4-202ENST00000379018 PTPRGP23470 1445 aa31.17■■■□□ 2.58
PDLIM4-202ENST00000379018 CARMIL1Q5VZK9 1371 aa31.16■■■□□ 2.58
PDLIM4-202ENST00000379018 CARMIL2Q6F5E8 1435 aa31.07■■■□□ 2.57
PDLIM4-202ENST00000379018 TNIKQ9UKE5 1360 aa31.06■■■□□ 2.56
PDLIM4-202ENST00000379018 IQGAP2Q13576 1575 aa31.05■■■□□ 2.56
PDLIM4-202ENST00000379018 ABCC2Q92887 1545 aa31.03■■■□□ 2.56
PDLIM4-202ENST00000379018 KDM4FA0A1W2PPD8 638 aa31.01■■■□□ 2.55
PDLIM4-202ENST00000379018 ASXL2Q76L83 1435 aa30.99■■■□□ 2.55
PDLIM4-202ENST00000379018 PLB1Q6P1J6 1458 aa30.92■■■□□ 2.54
PDLIM4-202ENST00000379018 UACAQ9BZF9 1416 aa30.9■■■□□ 2.54
PDLIM4-202ENST00000379018 PPRC1Q5VV67 1664 aaKnown RBP30.9■■■□□ 2.54
PDLIM4-202ENST00000379018 DISP1Q96F81 1524 aa30.89■■■□□ 2.54
PDLIM4-202ENST00000379018 UHRF1BP1LA0JNW5 1464 aa30.87■■■□□ 2.53
PDLIM4-202ENST00000379018 GLI2P10070 1586 aa30.86■■■□□ 2.53
PDLIM4-202ENST00000379018 RAPGEF2Q9Y4G8 1499 aa30.82■■■□□ 2.53
PDLIM4-202ENST00000379018 ZCCHC11Q5TAX3 1644 aaKnown RBP30.78■■■□□ 2.52
PDLIM4-202ENST00000379018 EPRSP07814 1512 aaKnown RBP30.78■■■□□ 2.52
PDLIM4-202ENST00000379018 UGGT2Q9NYU1 1516 aa30.78■■■□□ 2.52
PDLIM4-202ENST00000379018 KIAA0556O60303 1618 aa30.77■■■□□ 2.52
PDLIM4-202ENST00000379018 KDM5BQ9UGL1 1544 aa30.76■■■□□ 2.51
PDLIM4-202ENST00000379018 MAP3K4Q9Y6R4 1608 aa30.73■■■□□ 2.51
PDLIM4-202ENST00000379018 ADGRL1O94910 1474 aa30.73■■■□□ 2.51
PDLIM4-202ENST00000379018 COL17A1Q9UMD9 1497 aaPredicted RBP30.71■■■□□ 2.51
PDLIM4-202ENST00000379018 TEX14Q8IWB6 1497 aa30.67■■■□□ 2.5
PDLIM4-202ENST00000379018 CTTNBP2Q8WZ74 1663 aa30.64■■■□□ 2.5
PDLIM4-202ENST00000379018 WDR7Q9Y4E6 1490 aa30.62■■■□□ 2.49
PDLIM4-202ENST00000379018 KCNH8Q96L42 1107 aa30.55■■■□□ 2.48
PDLIM4-202ENST00000379018 GOLGA3Q08378 1498 aa30.52■■■□□ 2.48
PDLIM4-202ENST00000379018 ILDR1Q86SU0 546 aaPredicted RBP30.49■■■□□ 2.47
PDLIM4-202ENST00000379018 ABCA8O94911 1581 aa30.48■■■□□ 2.47
PDLIM4-202ENST00000379018 CD109Q6YHK3 1445 aa30.47■■■□□ 2.47
PDLIM4-202ENST00000379018 ARID3CA6NKF2 412 aa30.47■■■□□ 2.47
PDLIM4-202ENST00000379018 CFAP43Q8NDM7 1665 aa30.45■■■□□ 2.46
PDLIM4-202ENST00000379018 HECW2Q9P2P5 1572 aa30.42■■■□□ 2.46
PDLIM4-202ENST00000379018 MAGI3Q5TCQ9 1506 aa30.4■■■□□ 2.46
PDLIM4-202ENST00000379018 P3H3Q8IVL6 736 aa30.39■■■□□ 2.46
PDLIM4-202ENST00000379018 PRXQ9BXM0 1461 aa30.37■■■□□ 2.45
PDLIM4-202ENST00000379018 KIF21BO75037 1637 aa30.31■■■□□ 2.44
PDLIM4-202ENST00000379018 FAM9AQ8IZU1 332 aaPredicted RBP30.29■■■□□ 2.44
PDLIM4-202ENST00000379018 ATP10BO94823 1461 aa30.23■■■□□ 2.43
PDLIM4-202ENST00000379018 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.19■■■□□ 2.42
PDLIM4-202ENST00000379018 HNRNPUL2Q1KMD3 747 aaKnown RBP30.19■■■□□ 2.42
PDLIM4-202ENST00000379018 RANGAP1P46060 587 aaPredicted RBP30.18■■■□□ 2.42
PDLIM4-202ENST00000379018 ARAP3Q8WWN8 1544 aa30.17■■■□□ 2.42
PDLIM4-202ENST00000379018 ABCA9Q8IUA7 1624 aa30.14■■■□□ 2.41
PDLIM4-202ENST00000379018 RAPGEF6Q8TEU7 1601 aa30.13■■■□□ 2.41
PDLIM4-202ENST00000379018 SAMD9Q5K651 1589 aa30.11■■■□□ 2.41
PDLIM4-202ENST00000379018 RAPGEF3O95398 923 aa30.1■■■□□ 2.41
PDLIM4-202ENST00000379018 CSRNP3Q8WYN3 585 aa30.09■■■□□ 2.41
PDLIM4-202ENST00000379018 PHLDB1Q86UU1 1377 aa30.02■■■□□ 2.4
PDLIM4-202ENST00000379018 ARID4BQ4LE39 1312 aaPredicted RBP30.01■■■□□ 2.4
PDLIM4-202ENST00000379018 FHOD3Q2V2M9 1422 aa30.01■■■□□ 2.39
PDLIM4-202ENST00000379018 NEO1Q92859 1461 aa30■■■□□ 2.39
PDLIM4-202ENST00000379018 NUP153P49790 1475 aaKnown RBP29.99■■■□□ 2.39
PDLIM4-202ENST00000379018 PTPRMP28827 1452 aa29.99■■■□□ 2.39
PDLIM4-202ENST00000379018 ADAMTSL3P82987 1691 aa29.98■■■□□ 2.39
PDLIM4-202ENST00000379018 FRMPD1Q5SYB0 1578 aa29.97■■■□□ 2.39
PDLIM4-202ENST00000379018 BCORL1Q5H9F3 1711 aa29.92■■■□□ 2.38
PDLIM4-202ENST00000379018 MADDQ8WXG6 1647 aa29.92■■■□□ 2.38
PDLIM4-202ENST00000379018 PLEKHD1A6NEE1 506 aa29.88■■■□□ 2.37
PDLIM4-202ENST00000379018 PLPPR3Q6T4P5 718 aa29.86■■■□□ 2.37
PDLIM4-202ENST00000379018 ARHGEF40Q8TER5 1519 aa29.85■■■□□ 2.37
PDLIM4-202ENST00000379018 EEA1Q15075 1411 aa29.84■■■□□ 2.37
PDLIM4-202ENST00000379018 DENND4BO75064 1496 aaPredicted RBP29.84■■■□□ 2.37
PDLIM4-202ENST00000379018 RIMS1Q86UR5 1692 aaKnown RBP29.82■■■□□ 2.36
PDLIM4-202ENST00000379018 FANCAO15360 1455 aa29.81■■■□□ 2.36
PDLIM4-202ENST00000379018 AKNAQ7Z591 1439 aa29.81■■■□□ 2.36
PDLIM4-202ENST00000379018 RICTORQ6R327 1708 aa29.81■■■□□ 2.36
PDLIM4-202ENST00000379018 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.8■■■□□ 2.36
PDLIM4-202ENST00000379018 PCF11O94913 1555 aaKnown RBP29.79■■■□□ 2.36
PDLIM4-202ENST00000379018 TTC37Q6PGP7 1564 aa29.79■■■□□ 2.36
PDLIM4-202ENST00000379018 EHMT2Q96KQ7 1210 aa29.79■■■□□ 2.36
PDLIM4-202ENST00000379018 CFAP74Q9C0B2 1584 aa29.78■■■□□ 2.36
PDLIM4-202ENST00000379018 FBXO41Q8TF61 875 aa29.78■■■□□ 2.36
PDLIM4-202ENST00000379018 CDK13Q14004 1512 aaKnown RBP29.75■■■□□ 2.35
PDLIM4-202ENST00000379018 EFCAB5A4FU69 1503 aa29.74■■■□□ 2.35
PDLIM4-202ENST00000379018 LMTK3Q96Q04 1460 aa29.74■■■□□ 2.35
PDLIM4-202ENST00000379018 MLECQ14165 292 aa29.7■■■□□ 2.35
PDLIM4-202ENST00000379018 ATP1B4Q9UN42 357 aaPredicted RBP29.7■■■□□ 2.35
PDLIM4-202ENST00000379018 ZFYVE16Q7Z3T8 1539 aa29.7■■■□□ 2.34
PDLIM4-202ENST00000379018 YEATS2Q9ULM3 1422 aa29.7■■■□□ 2.34
PDLIM4-202ENST00000379018 HSPA2P54652 639 aa29.67■■■□□ 2.34
PDLIM4-202ENST00000379018 POGZQ7Z3K3 1410 aa29.67■■■□□ 2.34
PDLIM4-202ENST00000379018 SIGLEC1Q9BZZ2 1709 aa29.67■■■□□ 2.34
PDLIM4-202ENST00000379018 ZMYM4Q5VZL5 1548 aa29.66■■■□□ 2.34
PDLIM4-202ENST00000379018 HECW1Q76N89 1606 aa29.63■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms