RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 RUSC2Q8N2Y8 1516 aa31.59■■■□□ 2.65
PDLIM4-202ENST00000379018 NPM1P06748 294 aaKnown RBP eCLIP31.48■■■□□ 2.63
PDLIM4-202ENST00000379018 FAM69CQ0P6D2 419 aa31.48■■■□□ 2.63
PDLIM4-202ENST00000379018 ADCY10Q96PN6 1610 aa31.41■■■□□ 2.62
PDLIM4-202ENST00000379018 ABCC10Q5T3U5 1492 aa31.4■■■□□ 2.62
PDLIM4-202ENST00000379018 MAPKBP1O60336 1514 aa31.36■■■□□ 2.61
PDLIM4-202ENST00000379018 DIP2BQ9P265 1576 aa31.34■■■□□ 2.61
PDLIM4-202ENST00000379018 KIAA0586Q9BVV6 1533 aa31.34■■■□□ 2.61
PDLIM4-202ENST00000379018 TTBK1Q5TCY1 1321 aaPredicted RBP31.33■■■□□ 2.61
PDLIM4-202ENST00000379018 KIF27Q86VH2 1401 aa31.32■■■□□ 2.61
PDLIM4-202ENST00000379018 IGF1RP08069 1367 aa31.32■■■□□ 2.6
PDLIM4-202ENST00000379018 CUL7Q14999 1698 aa31.31■■■□□ 2.6
PDLIM4-202ENST00000379018 TSPOAP1O95153 1857 aa31.28■■■□□ 2.6
PDLIM4-202ENST00000379018 KDM6BO15054 1643 aa31.21■■■□□ 2.59
PDLIM4-202ENST00000379018 PTPRGP23470 1445 aa31.17■■■□□ 2.58
PDLIM4-202ENST00000379018 CARMIL1Q5VZK9 1371 aa31.16■■■□□ 2.58
PDLIM4-202ENST00000379018 CARMIL2Q6F5E8 1435 aa31.07■■■□□ 2.57
PDLIM4-202ENST00000379018 TNIKQ9UKE5 1360 aa31.06■■■□□ 2.56
PDLIM4-202ENST00000379018 IQGAP2Q13576 1575 aa31.05■■■□□ 2.56
PDLIM4-202ENST00000379018 ABCC2Q92887 1545 aa31.03■■■□□ 2.56
PDLIM4-202ENST00000379018 KDM4FA0A1W2PPD8 638 aa31.01■■■□□ 2.55
PDLIM4-202ENST00000379018 ASXL2Q76L83 1435 aa30.99■■■□□ 2.55
PDLIM4-202ENST00000379018 PLB1Q6P1J6 1458 aa30.92■■■□□ 2.54
PDLIM4-202ENST00000379018 UACAQ9BZF9 1416 aa30.9■■■□□ 2.54
PDLIM4-202ENST00000379018 PPRC1Q5VV67 1664 aaKnown RBP30.9■■■□□ 2.54
PDLIM4-202ENST00000379018 DISP1Q96F81 1524 aa30.89■■■□□ 2.54
PDLIM4-202ENST00000379018 UHRF1BP1LA0JNW5 1464 aa30.87■■■□□ 2.53
PDLIM4-202ENST00000379018 GLI2P10070 1586 aa30.86■■■□□ 2.53
PDLIM4-202ENST00000379018 RAPGEF2Q9Y4G8 1499 aa30.82■■■□□ 2.53
PDLIM4-202ENST00000379018 ZCCHC11Q5TAX3 1644 aaKnown RBP30.78■■■□□ 2.52
PDLIM4-202ENST00000379018 EPRSP07814 1512 aaKnown RBP30.78■■■□□ 2.52
PDLIM4-202ENST00000379018 UGGT2Q9NYU1 1516 aa30.78■■■□□ 2.52
PDLIM4-202ENST00000379018 KIAA0556O60303 1618 aa30.77■■■□□ 2.52
PDLIM4-202ENST00000379018 KDM5BQ9UGL1 1544 aa30.76■■■□□ 2.51
PDLIM4-202ENST00000379018 MAP3K4Q9Y6R4 1608 aa30.73■■■□□ 2.51
PDLIM4-202ENST00000379018 ADGRL1O94910 1474 aa30.73■■■□□ 2.51
PDLIM4-202ENST00000379018 COL17A1Q9UMD9 1497 aaPredicted RBP30.71■■■□□ 2.51
PDLIM4-202ENST00000379018 TEX14Q8IWB6 1497 aa30.67■■■□□ 2.5
PDLIM4-202ENST00000379018 CTTNBP2Q8WZ74 1663 aa30.64■■■□□ 2.5
PDLIM4-202ENST00000379018 WDR7Q9Y4E6 1490 aa30.62■■■□□ 2.49
PDLIM4-202ENST00000379018 KCNH8Q96L42 1107 aa30.55■■■□□ 2.48
PDLIM4-202ENST00000379018 GOLGA3Q08378 1498 aa30.52■■■□□ 2.48
PDLIM4-202ENST00000379018 ILDR1Q86SU0 546 aaPredicted RBP30.49■■■□□ 2.47
PDLIM4-202ENST00000379018 ABCA8O94911 1581 aa30.48■■■□□ 2.47
PDLIM4-202ENST00000379018 CD109Q6YHK3 1445 aa30.47■■■□□ 2.47
PDLIM4-202ENST00000379018 ARID3CA6NKF2 412 aa30.47■■■□□ 2.47
PDLIM4-202ENST00000379018 CFAP43Q8NDM7 1665 aa30.45■■■□□ 2.46
PDLIM4-202ENST00000379018 HECW2Q9P2P5 1572 aa30.42■■■□□ 2.46
PDLIM4-202ENST00000379018 MAGI3Q5TCQ9 1506 aa30.4■■■□□ 2.46
PDLIM4-202ENST00000379018 P3H3Q8IVL6 736 aa30.39■■■□□ 2.46
PDLIM4-202ENST00000379018 PRXQ9BXM0 1461 aa30.37■■■□□ 2.45
PDLIM4-202ENST00000379018 KIF21BO75037 1637 aa30.31■■■□□ 2.44
PDLIM4-202ENST00000379018 FAM9AQ8IZU1 332 aaPredicted RBP30.29■■■□□ 2.44
PDLIM4-202ENST00000379018 ATP10BO94823 1461 aa30.23■■■□□ 2.43
PDLIM4-202ENST00000379018 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.19■■■□□ 2.42
PDLIM4-202ENST00000379018 HNRNPUL2Q1KMD3 747 aaKnown RBP30.19■■■□□ 2.42
PDLIM4-202ENST00000379018 RANGAP1P46060 587 aaPredicted RBP30.18■■■□□ 2.42
PDLIM4-202ENST00000379018 ARAP3Q8WWN8 1544 aa30.17■■■□□ 2.42
PDLIM4-202ENST00000379018 ABCA9Q8IUA7 1624 aa30.14■■■□□ 2.41
PDLIM4-202ENST00000379018 RAPGEF6Q8TEU7 1601 aa30.13■■■□□ 2.41
PDLIM4-202ENST00000379018 SAMD9Q5K651 1589 aa30.11■■■□□ 2.41
PDLIM4-202ENST00000379018 RAPGEF3O95398 923 aa30.1■■■□□ 2.41
PDLIM4-202ENST00000379018 CSRNP3Q8WYN3 585 aa30.09■■■□□ 2.41
PDLIM4-202ENST00000379018 PHLDB1Q86UU1 1377 aa30.02■■■□□ 2.4
PDLIM4-202ENST00000379018 ARID4BQ4LE39 1312 aaPredicted RBP30.01■■■□□ 2.4
PDLIM4-202ENST00000379018 FHOD3Q2V2M9 1422 aa30.01■■■□□ 2.39
PDLIM4-202ENST00000379018 NEO1Q92859 1461 aa30■■■□□ 2.39
PDLIM4-202ENST00000379018 NUP153P49790 1475 aaKnown RBP29.99■■■□□ 2.39
PDLIM4-202ENST00000379018 PTPRMP28827 1452 aa29.99■■■□□ 2.39
PDLIM4-202ENST00000379018 ADAMTSL3P82987 1691 aa29.98■■■□□ 2.39
PDLIM4-202ENST00000379018 FRMPD1Q5SYB0 1578 aa29.97■■■□□ 2.39
PDLIM4-202ENST00000379018 BCORL1Q5H9F3 1711 aa29.92■■■□□ 2.38
PDLIM4-202ENST00000379018 MADDQ8WXG6 1647 aa29.92■■■□□ 2.38
PDLIM4-202ENST00000379018 PLEKHD1A6NEE1 506 aa29.88■■■□□ 2.37
PDLIM4-202ENST00000379018 PLPPR3Q6T4P5 718 aa29.86■■■□□ 2.37
PDLIM4-202ENST00000379018 ARHGEF40Q8TER5 1519 aa29.85■■■□□ 2.37
PDLIM4-202ENST00000379018 EEA1Q15075 1411 aa29.84■■■□□ 2.37
PDLIM4-202ENST00000379018 DENND4BO75064 1496 aaPredicted RBP29.84■■■□□ 2.37
PDLIM4-202ENST00000379018 RIMS1Q86UR5 1692 aaKnown RBP29.82■■■□□ 2.36
PDLIM4-202ENST00000379018 FANCAO15360 1455 aa29.81■■■□□ 2.36
PDLIM4-202ENST00000379018 AKNAQ7Z591 1439 aa29.81■■■□□ 2.36
PDLIM4-202ENST00000379018 RICTORQ6R327 1708 aa29.81■■■□□ 2.36
PDLIM4-202ENST00000379018 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.8■■■□□ 2.36
PDLIM4-202ENST00000379018 PCF11O94913 1555 aaKnown RBP29.79■■■□□ 2.36
PDLIM4-202ENST00000379018 TTC37Q6PGP7 1564 aa29.79■■■□□ 2.36
PDLIM4-202ENST00000379018 EHMT2Q96KQ7 1210 aa29.79■■■□□ 2.36
PDLIM4-202ENST00000379018 CFAP74Q9C0B2 1584 aa29.78■■■□□ 2.36
PDLIM4-202ENST00000379018 FBXO41Q8TF61 875 aa29.78■■■□□ 2.36
PDLIM4-202ENST00000379018 CDK13Q14004 1512 aaKnown RBP29.75■■■□□ 2.35
PDLIM4-202ENST00000379018 EFCAB5A4FU69 1503 aa29.74■■■□□ 2.35
PDLIM4-202ENST00000379018 LMTK3Q96Q04 1460 aa29.74■■■□□ 2.35
PDLIM4-202ENST00000379018 MLECQ14165 292 aa29.7■■■□□ 2.35
PDLIM4-202ENST00000379018 ATP1B4Q9UN42 357 aaPredicted RBP29.7■■■□□ 2.35
PDLIM4-202ENST00000379018 ZFYVE16Q7Z3T8 1539 aa29.7■■■□□ 2.34
PDLIM4-202ENST00000379018 YEATS2Q9ULM3 1422 aa29.7■■■□□ 2.34
PDLIM4-202ENST00000379018 HSPA2P54652 639 aa29.67■■■□□ 2.34
PDLIM4-202ENST00000379018 POGZQ7Z3K3 1410 aa29.67■■■□□ 2.34
PDLIM4-202ENST00000379018 SIGLEC1Q9BZZ2 1709 aa29.67■■■□□ 2.34
PDLIM4-202ENST00000379018 ZMYM4Q5VZL5 1548 aa29.66■■■□□ 2.34
PDLIM4-202ENST00000379018 HECW1Q76N89 1606 aa29.63■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms