RNA–Protein interactions for RNA: ENST00000378815.10

RAB3IP-204, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-204ENST00000378815 FHAD1B1AJZ9 1412 aa23.81■■□□□ 1.4
RAB3IP-204ENST00000378815 TTBK1Q5TCY1 1321 aaPredicted RBP23.8■■□□□ 1.4
RAB3IP-204ENST00000378815 APLP2Q06481 763 aa23.8■■□□□ 1.4
RAB3IP-204ENST00000378815 ADAMTS12P58397 1594 aa23.79■■□□□ 1.4
RAB3IP-204ENST00000378815 EFCAB5A4FU69 1503 aa23.75■■□□□ 1.39
RAB3IP-204ENST00000378815 EIF4G3O43432 1585 aaKnown RBP23.75■■□□□ 1.39
RAB3IP-204ENST00000378815 SNAPC4Q5SXM2 1469 aa23.67■■□□□ 1.38
RAB3IP-204ENST00000378815 FHOD3Q2V2M9 1422 aa23.65■■□□□ 1.38
RAB3IP-204ENST00000378815 SAMD9Q5K651 1589 aa23.64■■□□□ 1.37
RAB3IP-204ENST00000378815 P3H3Q8IVL6 736 aa23.63■■□□□ 1.37
RAB3IP-204ENST00000378815 MAGI1Q96QZ7 1491 aaPredicted RBP23.62■■□□□ 1.37
RAB3IP-204ENST00000378815 KANK4Q5T7N3 995 aaPredicted RBP23.61■■□□□ 1.37
RAB3IP-204ENST00000378815 MAP3K1Q13233 1512 aa23.61■■□□□ 1.37
RAB3IP-204ENST00000378815 PCF11O94913 1555 aaKnown RBP23.57■■□□□ 1.36
RAB3IP-204ENST00000378815 IQGAP2Q13576 1575 aa23.57■■□□□ 1.36
RAB3IP-204ENST00000378815 GRIN2AQ12879 1464 aa23.56■■□□□ 1.36
RAB3IP-204ENST00000378815 FMN1Q68DA7 1419 aa23.55■■□□□ 1.36
RAB3IP-204ENST00000378815 TIAM1Q13009 1591 aa23.55■■□□□ 1.36
RAB3IP-204ENST00000378815 FYCO1Q9BQS8 1478 aa23.54■■□□□ 1.36
RAB3IP-204ENST00000378815 CASKIN1Q8WXD9 1431 aa23.54■■□□□ 1.36
RAB3IP-204ENST00000378815 SYNJ2O15056 1496 aa23.54■■□□□ 1.36
RAB3IP-204ENST00000378815 KIAA0586Q9BVV6 1533 aa23.51■■□□□ 1.35
RAB3IP-204ENST00000378815 UGGT2Q9NYU1 1516 aa23.48■■□□□ 1.35
RAB3IP-204ENST00000378815 CFAP43Q8NDM7 1665 aa23.47■■□□□ 1.35
RAB3IP-204ENST00000378815 CHMP7Q8WUX9 453 aaPredicted RBP23.46■■□□□ 1.35
RAB3IP-204ENST00000378815 LRRC9Q6ZRR7 1453 aa23.46■■□□□ 1.35
RAB3IP-204ENST00000378815 CEP170Q5SW79 1584 aa23.41■■□□□ 1.34
RAB3IP-204ENST00000378815 RRBP1Q9P2E9 1410 aaKnown RBP23.4■■□□□ 1.34
RAB3IP-204ENST00000378815 ATP1B4Q9UN42 357 aaPredicted RBP23.4■■□□□ 1.34
RAB3IP-204ENST00000378815 NUP160Q12769 1436 aa23.39■■□□□ 1.34
RAB3IP-204ENST00000378815 ZEB1P37275 1124 aaPredicted RBP23.39■■□□□ 1.33
RAB3IP-204ENST00000378815 FBLN2P98095 1184 aa23.36■■□□□ 1.33
RAB3IP-204ENST00000378815 DISP1Q96F81 1524 aa23.36■■□□□ 1.33
RAB3IP-204ENST00000378815 KIAA0556O60303 1618 aa23.34■■□□□ 1.33
RAB3IP-204ENST00000378815 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.33■■□□□ 1.33
RAB3IP-204ENST00000378815 HNRNPUL2Q1KMD3 747 aaKnown RBP23.33■■□□□ 1.33
RAB3IP-204ENST00000378815 CCNB3Q8WWL7 1395 aa23.3■■□□□ 1.32
RAB3IP-204ENST00000378815 LRRIQ1Q96JM4 1722 aa23.29■■□□□ 1.32
RAB3IP-204ENST00000378815 PHLDB1Q86UU1 1377 aa23.27■■□□□ 1.32
RAB3IP-204ENST00000378815 CCER1Q8TC90 406 aaPredicted RBP23.26■■□□□ 1.31
RAB3IP-204ENST00000378815 HECW1Q76N89 1606 aa23.26■■□□□ 1.31
RAB3IP-204ENST00000378815 CCDC18Q5T9S5 1454 aa23.25■■□□□ 1.31
RAB3IP-204ENST00000378815 JPH4Q96JJ6 628 aa23.22■■□□□ 1.31
RAB3IP-204ENST00000378815 MTUS2Q5JR59 1369 aa23.21■■□□□ 1.31
RAB3IP-204ENST00000378815 EPRSP07814 1512 aaKnown RBP23.2■■□□□ 1.3
RAB3IP-204ENST00000378815 CARMIL2Q6F5E8 1435 aa23.18■■□□□ 1.3
RAB3IP-204ENST00000378815 EHBP1L1Q8N3D4 1523 aa23.17■■□□□ 1.3
RAB3IP-204ENST00000378815 CHD1O14646 1710 aa23.16■■□□□ 1.3
RAB3IP-204ENST00000378815 MAGI3Q5TCQ9 1506 aa23.14■■□□□ 1.3
RAB3IP-204ENST00000378815 RAPGEF6Q8TEU7 1601 aa23.12■■□□□ 1.29
RAB3IP-204ENST00000378815 CDK13Q14004 1512 aaKnown RBP23.12■■□□□ 1.29
RAB3IP-204ENST00000378815 NUP153P49790 1475 aaKnown RBP23.11■■□□□ 1.29
RAB3IP-204ENST00000378815 NCOA2Q15596 1464 aa23.11■■□□□ 1.29
RAB3IP-204ENST00000378815 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.1■■□□□ 1.29
RAB3IP-204ENST00000378815 SUPT6HQ7KZ85 1726 aaKnown RBP23.1■■□□□ 1.29
RAB3IP-204ENST00000378815 ARHGEF11O15085 1522 aa23.09■■□□□ 1.29
RAB3IP-204ENST00000378815 FGD6Q6ZV73 1430 aa23.08■■□□□ 1.28
RAB3IP-204ENST00000378815 PLB1Q6P1J6 1458 aa23.05■■□□□ 1.28
RAB3IP-204ENST00000378815 FAM50AQ14320 339 aaKnown RBP23.05■■□□□ 1.28
RAB3IP-204ENST00000378815 MYOM3Q5VTT5 1437 aa23.05■■□□□ 1.28
RAB3IP-204ENST00000378815 PRG4Q92954 1404 aaPredicted RBP23.05■■□□□ 1.28
RAB3IP-204ENST00000378815 ITGAEP38570 1179 aa23.03■■□□□ 1.28
RAB3IP-204ENST00000378815 SHROOM2Q13796 1616 aa23.02■■□□□ 1.27
RAB3IP-204ENST00000378815 ARID3CA6NKF2 412 aa23.01■■□□□ 1.27
RAB3IP-204ENST00000378815 ABCA8O94911 1581 aa22.99■■□□□ 1.27
RAB3IP-204ENST00000378815 CDK11AQ9UQ88 783 aaPredicted RBP22.96■■□□□ 1.27
RAB3IP-204ENST00000378815 PTPRGP23470 1445 aa22.94■■□□□ 1.26
RAB3IP-204ENST00000378815 CLASP1Q7Z460 1538 aa22.94■■□□□ 1.26
RAB3IP-204ENST00000378815 DHX57Q6P158 1386 aaKnown RBP22.92■■□□□ 1.26
RAB3IP-204ENST00000378815 SETD5Q9C0A6 1442 aa22.91■■□□□ 1.26
RAB3IP-204ENST00000378815 PTPN23Q9H3S7 1636 aa22.91■■□□□ 1.26
RAB3IP-204ENST00000378815 TCOF1Q13428 1488 aaKnown RBP22.91■■□□□ 1.26
RAB3IP-204ENST00000378815 RAB3GAP2Q9H2M9 1393 aa22.9■■□□□ 1.26
RAB3IP-204ENST00000378815 TROQ12816 1431 aaPredicted RBP22.9■■□□□ 1.26
RAB3IP-204ENST00000378815 MIA2Q96PC5 1412 aa22.9■■□□□ 1.26
RAB3IP-204ENST00000378815 CLSPNQ9HAW4 1339 aa22.87■■□□□ 1.25
RAB3IP-204ENST00000378815 ATP10BO94823 1461 aa22.86■■□□□ 1.25
RAB3IP-204ENST00000378815 ERCC6L2Q5T890 1561 aa22.85■■□□□ 1.25
RAB3IP-204ENST00000378815 PTPRKQ15262 1439 aa22.84■■□□□ 1.25
RAB3IP-204ENST00000378815 ADCY10Q96PN6 1610 aa22.82■■□□□ 1.24
RAB3IP-204ENST00000378815 UACAQ9BZF9 1416 aa22.81■■□□□ 1.24
RAB3IP-204ENST00000378815 HFM1A2PYH4 1435 aa22.78■■□□□ 1.24
RAB3IP-204ENST00000378815 PLEKHD1A6NEE1 506 aa22.77■■□□□ 1.24
RAB3IP-204ENST00000378815 KIF14Q15058 1648 aa22.77■■□□□ 1.24
RAB3IP-204ENST00000378815 GPATCH8Q9UKJ3 1502 aaKnown RBP22.73■■□□□ 1.23
RAB3IP-204ENST00000378815 ABCC2Q92887 1545 aa22.72■■□□□ 1.23
RAB3IP-204ENST00000378815 NAIPQ13075 1403 aa22.71■■□□□ 1.23
RAB3IP-204ENST00000378815 ITSN2Q9NZM3 1697 aa22.71■■□□□ 1.23
RAB3IP-204ENST00000378815 ABCC10Q5T3U5 1492 aa22.7■■□□□ 1.22
RAB3IP-204ENST00000378815 AKNAQ7Z591 1439 aa22.69■■□□□ 1.22
RAB3IP-204ENST00000378815 MAPKBP1O60336 1514 aa22.68■■□□□ 1.22
RAB3IP-204ENST00000378815 ZNF644Q9H582 1327 aaPredicted RBP22.67■■□□□ 1.22
RAB3IP-204ENST00000378815 CFDP1Q9UEE9 299 aaPredicted RBP22.67■■□□□ 1.22
RAB3IP-204ENST00000378815 UHRF1BP1LA0JNW5 1464 aa22.66■■□□□ 1.22
RAB3IP-204ENST00000378815 DAPK1P53355 1430 aa22.66■■□□□ 1.22
RAB3IP-204ENST00000378815 DNMT1P26358 1616 aaKnown RBP22.65■■□□□ 1.22
RAB3IP-204ENST00000378815 CAMSAP2Q08AD1 1489 aa22.64■■□□□ 1.22
RAB3IP-204ENST00000378815 ABCC5O15440 1437 aa22.64■■□□□ 1.21
RAB3IP-204ENST00000378815 CHIC2Q9UKJ5 165 aa22.62■■□□□ 1.21
RAB3IP-204ENST00000378815 GCC2Q8IWJ2 1684 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms