RNA–Protein interactions for RNA: ENST00000378387.3

ARHGEF39-201, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF39, Length 3,769 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-201ENST00000378387 ABCC8Q09428 1581 aa14.38□□□□□ -0.11
ARHGEF39-201ENST00000378387 CCER2I3L3R5 266 aa14.37□□□□□ -0.11
ARHGEF39-201ENST00000378387 KANK4Q5T7N3 995 aaPredicted RBP14.37□□□□□ -0.11
ARHGEF39-201ENST00000378387 CECR2Q9BXF3 1484 aa14.36□□□□□ -0.11
ARHGEF39-201ENST00000378387 RUSC2Q8N2Y8 1516 aa14.36□□□□□ -0.11
ARHGEF39-201ENST00000378387 GOLGA3Q08378 1498 aa14.35□□□□□ -0.11
ARHGEF39-201ENST00000378387 IPO9Q96P70 1041 aaKnown RBP14.34□□□□□ -0.11
ARHGEF39-201ENST00000378387 TIMELESSQ9UNS1 1208 aa14.34□□□□□ -0.11
ARHGEF39-201ENST00000378387 MRS2Q9HD23 443 aa14.34□□□□□ -0.11
ARHGEF39-201ENST00000378387 BAZ1BQ9UIG0 1483 aaKnown RBP14.33□□□□□ -0.12
ARHGEF39-201ENST00000378387 ARXQ96QS3 562 aa14.3□□□□□ -0.12
ARHGEF39-201ENST00000378387 BRPF3Q9ULD4 1205 aa14.28□□□□□ -0.12
ARHGEF39-201ENST00000378387 PPP1R15AO75807 674 aaPredicted RBP14.27□□□□□ -0.12
ARHGEF39-201ENST00000378387 TONSLQ96HA7 1378 aa14.27□□□□□ -0.12
ARHGEF39-201ENST00000378387 VPS8Q8N3P4 1428 aa14.25□□□□□ -0.13
ARHGEF39-201ENST00000378387 UBE2Q2Q8WVN8 375 aa14.25□□□□□ -0.13
ARHGEF39-201ENST00000378387 MROH2BQ7Z745 1585 aa14.22□□□□□ -0.13
ARHGEF39-201ENST00000378387 RAB3GAP2Q9H2M9 1393 aa14.21□□□□□ -0.13
ARHGEF39-201ENST00000378387 GLIPR1L2Q4G1C9 344 aa14.21□□□□□ -0.13
ARHGEF39-201ENST00000378387 P3H3Q8IVL6 736 aa14.19□□□□□ -0.14
ARHGEF39-201ENST00000378387 EEA1Q15075 1411 aa14.19□□□□□ -0.14
ARHGEF39-201ENST00000378387 PPM1GO15355 546 aaPredicted RBP14.17□□□□□ -0.14
ARHGEF39-201ENST00000378387 CCNB3Q8WWL7 1395 aa14.17□□□□□ -0.14
ARHGEF39-201ENST00000378387 PKNOX2Q96KN3 472 aa14.17□□□□□ -0.14
ARHGEF39-201ENST00000378387 SLC4A3P48751 1232 aa14.16□□□□□ -0.14
ARHGEF39-201ENST00000378387 NACADO15069 1562 aa14.15□□□□□ -0.14
ARHGEF39-201ENST00000378387 VSIG10Q8N0Z9 540 aa14.14□□□□□ -0.15
ARHGEF39-201ENST00000378387 CEP164Q9UPV0 1460 aa14.14□□□□□ -0.15
ARHGEF39-201ENST00000378387 CCDC184Q52MB2 194 aa14.14□□□□□ -0.15
ARHGEF39-201ENST00000378387 WIZO95785 1651 aa14.12□□□□□ -0.15
ARHGEF39-201ENST00000378387 ZNF326Q5BKZ1 582 aaKnown RBP14.11□□□□□ -0.15
ARHGEF39-201ENST00000378387 GSE1Q14687 1217 aa14.1□□□□□ -0.15
ARHGEF39-201ENST00000378387 ARID4BQ4LE39 1312 aaPredicted RBP14.1□□□□□ -0.15
ARHGEF39-201ENST00000378387 NAP1L5Q96NT1 182 aaPredicted RBP14.08□□□□□ -0.15
ARHGEF39-201ENST00000378387 EIF4G2P78344 907 aaKnown RBP eCLIP14.06□□□□□ -0.16
ARHGEF39-201ENST00000378387 HSPA5P11021 654 aaKnown RBP14.06□□□□□ -0.16
ARHGEF39-201ENST00000378387 USP35Q9P2H5 1018 aa14.05□□□□□ -0.16
ARHGEF39-201ENST00000378387 WDR97A6NE52 1622 aa14.05□□□□□ -0.16
ARHGEF39-201ENST00000378387 FRAT1Q92837 279 aaPredicted RBP14.04□□□□□ -0.16
ARHGEF39-201ENST00000378387 SETD5Q9C0A6 1442 aa14.04□□□□□ -0.16
ARHGEF39-201ENST00000378387 PDE4AP27815 886 aa14.04□□□□□ -0.16
ARHGEF39-201ENST00000378387 RAPGEF2Q9Y4G8 1499 aa14.03□□□□□ -0.16
ARHGEF39-201ENST00000378387 TMC1Q8TDI8 760 aa14.03□□□□□ -0.16
ARHGEF39-201ENST00000378387 RSPH6AQ9H0K4 717 aa14.01□□□□□ -0.17
ARHGEF39-201ENST00000378387 DDRGK1Q96HY6 314 aa14□□□□□ -0.17
ARHGEF39-201ENST00000378387 NFKBIBQ15653 356 aa14□□□□□ -0.17
ARHGEF39-201ENST00000378387 CHIC2Q9UKJ5 165 aa14□□□□□ -0.17
ARHGEF39-201ENST00000378387 BAZ1AQ9NRL2 1556 aaPredicted RBP13.99□□□□□ -0.17
ARHGEF39-201ENST00000378387 AKNAQ7Z591 1439 aa13.98□□□□□ -0.17
ARHGEF39-201ENST00000378387 EXOC6Q8TAG9 804 aa13.97□□□□□ -0.17
ARHGEF39-201ENST00000378387 PRKRIP1Q9H875 184 aaPredicted RBP13.97□□□□□ -0.17
ARHGEF39-201ENST00000378387 ZBED9Q6R2W3 1325 aa13.97□□□□□ -0.17
ARHGEF39-201ENST00000378387 SKAP1Q86WV1 359 aa13.96□□□□□ -0.17
ARHGEF39-201ENST00000378387 NUDCQ9Y266 331 aa13.96□□□□□ -0.17
ARHGEF39-201ENST00000378387 TCERG1O14776 1098 aaKnown RBP13.96□□□□□ -0.18
ARHGEF39-201ENST00000378387 WASHC2AQ641Q2 1341 aa13.93□□□□□ -0.18
ARHGEF39-201ENST00000378387 RGS3P49796 1198 aa13.93□□□□□ -0.18
ARHGEF39-201ENST00000378387 RRP7BPQ9NSQ0 103 aa13.93□□□□□ -0.18
ARHGEF39-201ENST00000378387 HSP90AA2PQ14568 343 aaPredicted RBP13.92□□□□□ -0.18
ARHGEF39-201ENST00000378387 KIF21BO75037 1637 aa13.91□□□□□ -0.18
ARHGEF39-201ENST00000378387 FRAT2O75474 233 aaPredicted RBP13.91□□□□□ -0.18
ARHGEF39-201ENST00000378387 ZMYND15Q9H091 742 aa13.91□□□□□ -0.18
ARHGEF39-201ENST00000378387 HSP90AA1P07900 732 aaKnown RBP13.89□□□□□ -0.19
ARHGEF39-201ENST00000378387 PNNQ9H307 717 aaKnown RBP13.89□□□□□ -0.19
ARHGEF39-201ENST00000378387 PLIN1O60240 522 aa13.88□□□□□ -0.19
ARHGEF39-201ENST00000378387 FOXD1Q16676 465 aa13.88□□□□□ -0.19
ARHGEF39-201ENST00000378387 GZF1Q9H116 711 aaPredicted RBP13.88□□□□□ -0.19
ARHGEF39-201ENST00000378387 SLKQ9H2G2 1235 aaPredicted RBP13.87□□□□□ -0.19
ARHGEF39-201ENST00000378387 PODXL2Q9NZ53 605 aa13.86□□□□□ -0.19
ARHGEF39-201ENST00000378387 BACH2Q9BYV9 841 aa13.85□□□□□ -0.19
ARHGEF39-201ENST00000378387 C11orf95C9JLR9 678 aaPredicted RBP13.85□□□□□ -0.19
ARHGEF39-201ENST00000378387 RCAN3Q9UKA8 241 aa13.85□□□□□ -0.19
ARHGEF39-201ENST00000378387 TOP2AP11388 1531 aaKnown RBP13.84□□□□□ -0.19
ARHGEF39-201ENST00000378387 SPRYD3Q8NCJ5 442 aa13.84□□□□□ -0.19
ARHGEF39-201ENST00000378387 RRBP1Q9P2E9 1410 aaKnown RBP13.83□□□□□ -0.19
ARHGEF39-201ENST00000378387 A0A0U1RQG5 324 aaPredicted RBP13.83□□□□□ -0.19
ARHGEF39-201ENST00000378387 ARID3CA6NKF2 412 aa13.83□□□□□ -0.2
ARHGEF39-201ENST00000378387 WASHC2CQ9Y4E1 1318 aa13.83□□□□□ -0.2
ARHGEF39-201ENST00000378387 FAM43AQ8N2R8 423 aa13.82□□□□□ -0.2
ARHGEF39-201ENST00000378387 ARID3AQ99856 593 aa13.82□□□□□ -0.2
ARHGEF39-201ENST00000378387 RRP1P56182 461 aaKnown RBP13.8□□□□□ -0.2
ARHGEF39-201ENST00000378387 MAPKBP1O60336 1514 aa13.79□□□□□ -0.2
ARHGEF39-201ENST00000378387 PLEKHG5O94827 1062 aa13.79□□□□□ -0.2
ARHGEF39-201ENST00000378387 L3MBTL2Q969R5 705 aa13.79□□□□□ -0.2
ARHGEF39-201ENST00000378387 SMARCA4P51532 1647 aa13.78□□□□□ -0.2
ARHGEF39-201ENST00000378387 DCAF11Q8TEB1 546 aa13.77□□□□□ -0.21
ARHGEF39-201ENST00000378387 SMARCA2P51531 1590 aa13.76□□□□□ -0.21
ARHGEF39-201ENST00000378387 ARAP1Q96P48 1450 aa13.76□□□□□ -0.21
ARHGEF39-201ENST00000378387 POGKQ9P215 609 aa13.75□□□□□ -0.21
ARHGEF39-201ENST00000378387 TRIM44Q96DX7 344 aaPredicted RBP13.75□□□□□ -0.21
ARHGEF39-201ENST00000378387 PHLDB1Q86UU1 1377 aa13.75□□□□□ -0.21
ARHGEF39-201ENST00000378387 L1TD1Q5T7N2 865 aaKnown RBP13.74□□□□□ -0.21
ARHGEF39-201ENST00000378387 MS4A1P11836 297 aa13.74□□□□□ -0.21
ARHGEF39-201ENST00000378387 CRBNQ96SW2 442 aa13.74□□□□□ -0.21
ARHGEF39-201ENST00000378387 CNTLNQ9NXG0 1405 aa13.71□□□□□ -0.21
ARHGEF39-201ENST00000378387 KDM2AQ9Y2K7 1162 aa13.71□□□□□ -0.21
ARHGEF39-201ENST00000378387 BECN1Q14457 450 aa13.71□□□□□ -0.21
ARHGEF39-201ENST00000378387 CDCA7LQ96GN5 454 aa13.7□□□□□ -0.22
ARHGEF39-201ENST00000378387 RRAGDQ9NQL2 400 aaPredicted RBP13.7□□□□□ -0.22
ARHGEF39-201ENST00000378387 CCDC7Q96M83 1385 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms