RNA–Protein interactions for RNA: ENST00000377685.9

ATP2A2-203, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

TSL 5

Gene ATP2A2, Length 5,702 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-203ENST00000377685 BECN1Q14457 450 aa28.6■■■□□ 2.17
ATP2A2-203ENST00000377685 CDK11BP21127 795 aaKnown RBP28.58■■■□□ 2.17
ATP2A2-203ENST00000377685 CHMP7Q8WUX9 453 aaPredicted RBP28.58■■■□□ 2.17
ATP2A2-203ENST00000377685 TRIM44Q96DX7 344 aaPredicted RBP28.54■■■□□ 2.16
ATP2A2-203ENST00000377685 A0A0G2JS52 829 aa28.52■■■□□ 2.16
ATP2A2-203ENST00000377685 CLIP1P30622 1438 aa28.51■■■□□ 2.15
ATP2A2-203ENST00000377685 PPP1R15AO75807 674 aaPredicted RBP28.49■■■□□ 2.15
ATP2A2-203ENST00000377685 NCLP19338 710 aaKnown RBP28.49■■■□□ 2.15
ATP2A2-203ENST00000377685 ZBTB7CA1YPR0 619 aa28.48■■■□□ 2.15
ATP2A2-203ENST00000377685 MYO15BQ96JP2 1530 aa28.48■■■□□ 2.15
ATP2A2-203ENST00000377685 RRP7BPQ9NSQ0 103 aa28.46■■■□□ 2.15
ATP2A2-203ENST00000377685 SUPT16HQ9Y5B9 1047 aaKnown RBP28.46■■■□□ 2.15
ATP2A2-203ENST00000377685 C14orf37Q86TY3 774 aa28.45■■■□□ 2.15
ATP2A2-203ENST00000377685 RSF1Q96T23 1441 aaPredicted RBP28.41■■■□□ 2.14
ATP2A2-203ENST00000377685 CFAP53Q96M91 514 aa28.41■■■□□ 2.14
ATP2A2-203ENST00000377685 ZCCHC6Q5VYS8 1495 aaKnown RBP28.4■■■□□ 2.14
ATP2A2-203ENST00000377685 GOLGA6L22H0YM25 854 aa28.4■■■□□ 2.14
ATP2A2-203ENST00000377685 PPM1GO15355 546 aaPredicted RBP28.38■■■□□ 2.13
ATP2A2-203ENST00000377685 CCDC180Q9P1Z9 1646 aa28.37■■■□□ 2.13
ATP2A2-203ENST00000377685 CDCA8Q53HL2 280 aa28.36■■■□□ 2.13
ATP2A2-203ENST00000377685 PLEKHD1A6NEE1 506 aa28.36■■■□□ 2.13
ATP2A2-203ENST00000377685 SENP3-EIF4A1A0A087X0R7 540 aa28.36■■■□□ 2.13
ATP2A2-203ENST00000377685 KCNH8Q96L42 1107 aa28.33■■■□□ 2.13
ATP2A2-203ENST00000377685 PLEKHG5O94827 1062 aa28.32■■■□□ 2.12
ATP2A2-203ENST00000377685 CEP162Q5TB80 1403 aa28.31■■■□□ 2.12
ATP2A2-203ENST00000377685 SENP3Q9H4L4 574 aaPredicted RBP28.3■■■□□ 2.12
ATP2A2-203ENST00000377685 LAS1LQ9Y4W2 734 aaKnown RBP28.3■■■□□ 2.12
ATP2A2-203ENST00000377685 RGL3Q3MIN7 710 aa28.29■■■□□ 2.12
ATP2A2-203ENST00000377685 PPP4R2Q9NY27 417 aa28.29■■■□□ 2.12
ATP2A2-203ENST00000377685 KNSTRNQ9Y448 316 aa28.29■■■□□ 2.12
ATP2A2-203ENST00000377685 CASC1Q6TDU7 716 aa28.28■■■□□ 2.12
ATP2A2-203ENST00000377685 RTN4Q9NQC3 1192 aaKnown RBP28.27■■■□□ 2.12
ATP2A2-203ENST00000377685 NOP58Q9Y2X3 529 aaKnown RBP28.27■■■□□ 2.12
ATP2A2-203ENST00000377685 ERICH6BQ5W0A0 696 aa28.27■■■□□ 2.12
ATP2A2-203ENST00000377685 PTMAP06454 111 aaKnown RBP28.25■■■□□ 2.11
ATP2A2-203ENST00000377685 GOLGA3Q08378 1498 aa28.24■■■□□ 2.11
ATP2A2-203ENST00000377685 ZRSR1Q15695 479 aaKnown RBP28.23■■■□□ 2.11
ATP2A2-203ENST00000377685 TNNT2P45379 298 aaPredicted RBP28.21■■■□□ 2.11
ATP2A2-203ENST00000377685 FTSJ3Q8IY81 847 aaKnown RBP28.21■■■□□ 2.11
ATP2A2-203ENST00000377685 EEA1Q15075 1411 aa28.21■■■□□ 2.11
ATP2A2-203ENST00000377685 HAP1P54257 671 aaPredicted RBP28.21■■■□□ 2.11
ATP2A2-203ENST00000377685 NAP1L5Q96NT1 182 aaPredicted RBP28.2■■■□□ 2.1
ATP2A2-203ENST00000377685 CARD11Q9BXL7 1154 aa28.16■■■□□ 2.1
ATP2A2-203ENST00000377685 DNTTIP2Q5QJE6 756 aaKnown RBP28.15■■■□□ 2.1
ATP2A2-203ENST00000377685 CFDP1Q9UEE9 299 aaPredicted RBP28.15■■■□□ 2.1
ATP2A2-203ENST00000377685 MAPK8IP3Q9UPT6 1336 aa28.14■■■□□ 2.09
ATP2A2-203ENST00000377685 NUDCQ9Y266 331 aa28.11■■■□□ 2.09
ATP2A2-203ENST00000377685 ARID4BQ4LE39 1312 aaPredicted RBP28.11■■■□□ 2.09
ATP2A2-203ENST00000377685 RGS3P49796 1198 aa28.11■■■□□ 2.09
ATP2A2-203ENST00000377685 TPRNQ4KMQ1 711 aa28.07■■■□□ 2.08
ATP2A2-203ENST00000377685 B4GALNT3Q6L9W6 998 aa28.06■■■□□ 2.08
ATP2A2-203ENST00000377685 CHMP4BQ9H444 224 aaKnown RBP28.04■■■□□ 2.08
ATP2A2-203ENST00000377685 NEUROD2Q15784 382 aa28.03■■■□□ 2.08
ATP2A2-203ENST00000377685 SIN3AQ96ST3 1273 aa28.03■■■□□ 2.08
ATP2A2-203ENST00000377685 POGKQ9P215 609 aa28.01■■■□□ 2.07
ATP2A2-203ENST00000377685 MS4A1P11836 297 aa27.97■■■□□ 2.07
ATP2A2-203ENST00000377685 TNIKQ9UKE5 1360 aa27.97■■■□□ 2.07
ATP2A2-203ENST00000377685 DEKP35659 375 aaKnown RBP27.96■■■□□ 2.07
ATP2A2-203ENST00000377685 FRAT1Q92837 279 aaPredicted RBP27.95■■■□□ 2.07
ATP2A2-203ENST00000377685 KIF27Q86VH2 1401 aa27.94■■■□□ 2.06
ATP2A2-203ENST00000377685 HSP90AB1P08238 724 aaKnown RBP27.93■■■□□ 2.06
ATP2A2-203ENST00000377685 WRNQ14191 1432 aaPredicted RBP eCLIP27.93■■■□□ 2.06
ATP2A2-203ENST00000377685 PNNQ9H307 717 aaKnown RBP27.92■■■□□ 2.06
ATP2A2-203ENST00000377685 RBM19Q9Y4C8 960 aaKnown RBP27.91■■■□□ 2.06
ATP2A2-203ENST00000377685 PLCB2Q00722 1185 aa27.9■■■□□ 2.06
ATP2A2-203ENST00000377685 LMOD2Q6P5Q4 547 aa27.89■■■□□ 2.06
ATP2A2-203ENST00000377685 OS9Q13438 667 aaPredicted RBP27.89■■■□□ 2.05
ATP2A2-203ENST00000377685 CEP164Q9UPV0 1460 aa27.86■■■□□ 2.05
ATP2A2-203ENST00000377685 CC2D1BQ5T0F9 858 aaKnown RBP27.86■■■□□ 2.05
ATP2A2-203ENST00000377685 RB1CC1Q8TDY2 1594 aa27.85■■■□□ 2.05
ATP2A2-203ENST00000377685 GOLGA6L6A8MZA4 724 aa27.85■■■□□ 2.05
ATP2A2-203ENST00000377685 U2SURPO15042 1029 aaKnown RBP27.84■■■□□ 2.05
ATP2A2-203ENST00000377685 FGD1P98174 961 aa27.84■■■□□ 2.05
ATP2A2-203ENST00000377685 NPHP1O15259 732 aa27.83■■■□□ 2.05
ATP2A2-203ENST00000377685 TULP1O00294 542 aaPredicted RBP27.83■■■□□ 2.05
ATP2A2-203ENST00000377685 L1TD1Q5T7N2 865 aaKnown RBP27.8■■■□□ 2.04
ATP2A2-203ENST00000377685 CCER2I3L3R5 266 aa27.79■■■□□ 2.04
ATP2A2-203ENST00000377685 KCNJ4P48050 445 aa27.79■■■□□ 2.04
ATP2A2-203ENST00000377685 TMF1P82094 1093 aa27.79■■■□□ 2.04
ATP2A2-203ENST00000377685 HSCBQ8IWL3 235 aa27.78■■■□□ 2.04
ATP2A2-203ENST00000377685 BAZ1BQ9UIG0 1483 aaKnown RBP27.78■■■□□ 2.04
ATP2A2-203ENST00000377685 CCNB3Q8WWL7 1395 aa27.75■■■□□ 2.03
ATP2A2-203ENST00000377685 NRDCO43847 1150 aa27.74■■■□□ 2.03
ATP2A2-203ENST00000377685 TAOK2Q9UL54 1235 aa27.74■■■□□ 2.03
ATP2A2-203ENST00000377685 KANK1Q14678 1352 aa27.73■■■□□ 2.03
ATP2A2-203ENST00000377685 GOLGA2Q08379 1002 aa27.71■■■□□ 2.03
ATP2A2-203ENST00000377685 NAP1L2Q9ULW6 460 aaPredicted RBP27.71■■■□□ 2.03
ATP2A2-203ENST00000377685 MSNP26038 577 aaKnown RBP27.7■■■□□ 2.02
ATP2A2-203ENST00000377685 SPRYD3Q8NCJ5 442 aa27.69■■■□□ 2.02
ATP2A2-203ENST00000377685 HDGFP51858 240 aaKnown RBP27.69■■■□□ 2.02
ATP2A2-203ENST00000377685 DCAF11Q8TEB1 546 aa27.68■■■□□ 2.02
ATP2A2-203ENST00000377685 GOLGA6L4A6NEF3 574 aa27.67■■■□□ 2.02
ATP2A2-203ENST00000377685 MCCP23508 829 aa27.65■■■□□ 2.02
ATP2A2-203ENST00000377685 FHAD1B1AJZ9 1412 aa27.65■■■□□ 2.02
ATP2A2-203ENST00000377685 CHAF1AQ13111 956 aaPredicted RBP27.64■■■□□ 2.02
ATP2A2-203ENST00000377685 CFAP44Q96MT7 982 aa27.63■■■□□ 2.01
ATP2A2-203ENST00000377685 TIMELESSQ9UNS1 1208 aa27.63■■■□□ 2.01
ATP2A2-203ENST00000377685 MORC1Q86VD1 984 aa27.61■■■□□ 2.01
ATP2A2-203ENST00000377685 SRPK2P78362 688 aaKnown RBP27.61■■■□□ 2.01
ATP2A2-203ENST00000377685 ERCC6Q03468 1493 aa27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms